ZFIN ID: ZDB-ATB-081002-43
CITATIONS (370 total)
Antibody Name: zpr-1
   
Banerjee, S., Bongu, S., Hughes, S.P., Gaboury, E.K., Carver, C.E., Luo, X., Bessert, D.A., Thummel, R. (2024) Hypomyelinated vps16 Mutant Zebrafish Exhibit Systemic and Neurodevelopmental Pathologies. International Journal of Molecular Sciences. 25(13):
Gurung, S., Restrepo, N.K., Anand, S.K., Sittaramane, V., Sumanas, S. (2024) Requirement of a novel gene, drish, in the zebrafish retinal ganglion cell and primary motor axon development. Developmental Dynamics : an official publication of the American Association of Anatomists. 253(8):750-770
Bise, T., Pfefferli, C., Bonvin, M., Taylor, L., Lischer, H.E.L., Bruggmann, R., Jaźwińska, A. (2023) The regeneration-responsive element careg monitors activation of Müller glia after MNU-induced damage of photoreceptors in the zebrafish retina. Frontiers in molecular neuroscience. 16:11607071160707
Castellini, M.E., Spagnolli, G., Poggi, L., Biasini, E., Casarosa, S., Messina, A. (2023) Identification of the zebrafish homologues of IMPG2, a retinal proteoglycan. Cell and tissue research. 394(1):93-105
Emmerich, K., Walker, S.L., Wang, G., White, D.T., Ceisel, A., Wang, F., Teng, Y., Chunawala, Z., Graziano, G., Nimmagadda, S., Saxena, M.T., Qian, J., Mumm, J.S. (2023) Transcriptomic comparison of two selective retinal cell ablation paradigms in zebrafish reveals shared and cell-specific regenerative responses. PLoS Genetics. 19:e1010905e1010905
Kramer, A.C., Carthage, J., Berry, Y., Gurdziel, K., Cook, T.A., Thummel, R. (2023) A comparative analysis of gene and protein expression in chronic and acute models of photoreceptor degeneration in adult zebrafish. Frontiers in cell and developmental biology. 11:12332691233269
Letelier, J., Buono, L., Almuedo-Castillo, M., Zang, J., Mounieres, C., González-Díaz, S., Polvillo, R., Sanabria-Reinoso, E., Corbacho, J., Sousa-Ortega, A., Diez Del Corral, R., Neuhauss, S.C.F., Martínez-Morales, J.R. (2023) Mutation of vsx genes in zebrafish highlights the robustness of the retinal specification network. eLIFE. 12:
Mishra-Gorur, K., Barak, T., Kaulen, L.D., Henegariu, O., Jin, S.C., Aguilera, S.M., Yalbir, E., Goles, G., Nishimura, S., Miyagishima, D., Djenoune, L., Altinok, S., Rai, D.K., Viviano, S., Prendergast, A., Zerillo, C., Ozcan, K., Baran, B., Sencar, L., Goc, N., Yarman, Y., Ercan-Sencicek, A.G., Bilguvar, K., Lifton, R.P., Moliterno, J., Louvi, A., Yuan, S., Deniz, E., Brueckner, M., Gunel, M. (2023) Pleiotropic role of TRAF7 in skull-base meningiomas and congenital heart disease. Proceedings of the National Academy of Sciences of the United States of America. 120:e2214997120e2214997120
Owen, N., Toms, M., Tian, Y., Toualbi, L., Richardson, R., Young, R., Tracey-White, D., Dhami, P., Beck, S., Moosajee, M. (2023) Loss of the crumbs cell polarity complex disrupts epigenetic transcriptional control and cell cycle progression in the developing retina. The Journal of pathology. 259(4):441-454
Song, K., Lin, Z., Cao, L., Lu, B., Chen, Y., Zhang, S., Lu, J., Xu, H. (2023) Sox11b regulates the migration and fate determination of Müller glia-derived progenitors during retina regeneration in zebrafish. Neural regeneration research. 18:445-450
Sun, K., Han, Y., Li, J., Yu, S., Huang, Y., Zhang, Y., Reilly, J., Tu, J., Gao, P., Jia, D., Chen, X., Hu, H., Ren, M., Li, P., Luo, J., Ren, X., Zhang, X., Shu, X., Liu, F., Liu, M., Tang, Z. (2023) The splicing factor DHX38 enables retinal development through safeguarding genome integrity. iScience. 26:108103108103
Ulhaq, Z.S., Okamoto, K., Ogino, Y., Fai Tse, W.K. (2023) Dysregulation of spliceosomes complex induces retinitis pigmentosa-like characteristics in sf3b4-depleted zebrafish. The American journal of pathology. 193(9):1223-1233
Veen, K., Krylov, A., Yu, S., He, J., Boyd, P., Hyde, D.R., Mantamadiotis, T., Cheng, L.Y., Jusuf, P.R. (2023) Her6 and Prox1a are novel regulators of photoreceptor regeneration in the zebrafish retina. PLoS Genetics. 19:e1011010e1011010
Ahmed, M., Kojima, Y., Masai, I. (2022) Strip1 regulates retinal ganglion cell survival by suppressing Jun-mediated apoptosis to promote retinal neural circuit formation. eLIFE. 11:
Babu, S., Takeuchi, Y., Masai, I. (2022) Banp regulates DNA damage response and chromosome segregation during the cell cycle in zebrafish retina. eLIFE. 11
Chrystal, P.W., Lambacher, N.J., Doucette, L.P., Bellingham, J., Schiff, E.R., Noel, N.C.L., Li, C., Tsiropoulou, S., Casey, G.A., Zhai, Y., Nadolski, N.J., Majumder, M.H., Tagoe, J., D'Esposito, F., Cordeiro, M.F., Downes, S., Clayton-Smith, J., Ellingford, J., Genomics England Research Consortium, Mahroo, O.A., Hocking, J.C., Cheetham, M.E., Webster, A.R., Jansen, G., Blacque, O.E., Allison, W.T., Au, P.Y.B., MacDonald, I.M., Arno, G., Leroux, M.R. (2022) The inner junction protein CFAP20 functions in motile and non-motile cilia and is critical for vision. Nature communications. 13:6595
Ciampi, L., Mantica, F., López-Blanch, L., Permanyer, J., Rodriguez-Marín, C., Zang, J., Cianferoni, D., Jiménez-Delgado, S., Bonnal, S., Miravet-Verde, S., Ruprecht, V., Neuhauss, S.C.F., Banfi, S., Carrella, S., Serrano, L., Head, S.A., Irimia, M. (2022) Specialization of the photoreceptor transcriptome by Srrm3-dependent microexons is required for outer segment maintenance and vision. Proceedings of the National Academy of Sciences of the United States of America. 119:e2117090119
Cocchiaro, P., Di Donato, V., Rubbini, D., Mastropasqua, R., Allegretti, M., Mantelli, F., Aramini, A., Brandolini, L. (2022) Intravitreal Administration of rhNGF Enhances Regenerative Processes in a Zebrafish Model of Retinal Degeneration. Frontiers in pharmacology. 13:822359
Connor, B., Titialii-Torres, K., Rockenhaus, A.E., Passamonte, S., Morris, A.C., Lee, Y.S. (2022) Biliverdin regulates NR2E3 and zebrafish retinal photoreceptor development. Scientific Reports. 12:7310
Crouzier, L., Richard, E.M., Diez, C., Alzaeem, H., Denus, M., Cubedo, N., Delaunay, T., Glendenning, E., Baxendale, S., Liévens, J.C., Whitfield, T.T., Maurice, T., Delprat, B. (2022) Morphological, behavioral and cellular analyses revealed different phenotypes in Wolfram syndrome wfs1a and wfs1b zebrafish mutant lines. Human molecular genetics. 31(16):2711-2727
Crouzier, L., Richard, E.M., Diez, C., Denus, M., Peyrel, A., Alzaeem, H., Cubedo, N., Delaunay, T., Maurice, T., Delprat, B. (2022) NCS1 overexpression restored mitochondrial activity and behavioral alterations in a zebrafish model of Wolfram syndrome. Molecular therapy. Methods & clinical development. 27:295-308
Džulová, D., Lawless, D., Pinton, G.G., Renner, N.A., Schorderet, D.F. (2022) Incomplete Recovery of Zebrafish Retina Following Cryoinjury. Cells. 11(8):
Fogerty, J., Song, P., Boyd, P., Grabinski, S.E., Hoang, T., Reich, A., Cianciolo, L.T., Blackshaw, S., Mumm, J.S., Hyde, D.R., Perkins, B.D. (2022) Notch inhibition promotes regeneration and immunosuppression supports cone survival in a zebrafish model of inherited retinal dystrophy. The Journal of neuroscience : the official journal of the Society for Neuroscience. 42(26):5144-5158
George, A., Lee, J., Liu, J., Kim, S., Brooks, B.P. (2022) Zebrafish model of RERE syndrome recapitulates key ophthalmic defects that are rescued by small molecule inhibitor of shh signaling. Developmental Dynamics : an official publication of the American Association of Anatomists. 252(4):495-509
Han, R., Jin, M., Xu, G., He, J. (2022) Progressively Decreased HCN1 Channels Results in Cone Morphological Defects in Diabetic Retinopathy. The Journal of neuroscience : the official journal of the Society for Neuroscience. 42(43):8200-8212
Hernández-Bejarano, M., Gestri, G., Monfries, C., Tucker, L., Dragomir, E.I., Bianco, I.H., Bovolenta, P., Wilson, S.W., Cavodeassi, F. (2022) Foxd1-dependent induction of a temporal retinal character is required for visual function. Development (Cambridge, England). 149(24):
Krueger, L.A., Bills, J.D., Lim, Z.Y., Skidmore, J.M., Martin, D.M., Morris, A.C. (2022) Chromatin remodeler Chd7 regulates photoreceptor development and outer segment length. Experimental Eye Research. 226:109299
Magner, E., Sandoval-Sanchez, P., Kramer, A.C., Thummel, R., Hitchcock, P.F., Taylor, S.M. (2022) Disruption of miR-18a Alters Proliferation, Photoreceptor Replacement Kinetics, Inflammatory Signaling, and Microglia/Macrophage Numbers During Retinal Regeneration in Zebrafish. Molecular neurobiology. 59(5):2910-2931
Martins, R.R., Zamzam, M., Tracey-White, D., Moosajee, M., Thummel, R., Henriques, C.M., MacDonald, R.B. (2022) Müller Glia maintain their regenerative potential despite degeneration in the aged zebrafish retina. Aging Cell. 21(4):e13597
Masek, M., Etard, C., Hofmann, C., Hülsmeier, A.J., Zang, J., Takamiya, M., Gesemann, M., Neuhauss, S.C.F., Hornemann, T., Strähle, U., Bachmann-Gagescu, R. (2022) Loss of the Bardet-Biedl protein Bbs1 alters photoreceptor outer segment protein and lipid composition. Nature communications. 13:1282
Mitra, S., Devi, S., Lee, M.S., Jui, J., Sahu, A., Goldman, D. (2022) Vegf signaling between Müller glia and vascular endothelial cells is regulated by immune cells and stimulates retina regeneration. Proceedings of the National Academy of Sciences of the United States of America. 119:e2211690119e2211690119
Palma, K., Signore, I.A., Meynard, M.M., Ibarra, J., Armijo-Weingart, L., Cayuleo, M., Härtel, S., Concha, M.L. (2022) Ontogenesis of the asymmetric parapineal organ in the zebrafish epithalamus. Frontiers in cell and developmental biology. 10:999265999265
Sharrock, A.V., Mulligan, T.S., Hall, K.R., Williams, E.M., White, D.T., Zhang, L., Emmerich, K., Matthews, F., Nimmagadda, S., Washington, S., Le, K.D., Meir-Levi, D., Cox, O.L., Saxena, M.T., Calof, A.L., Lopez-Burks, M.E., Lander, A.D., Ding, D., Ji, H., Ackerley, D.F., Mumm, J.S. (2022) NTR 2.0: a rationally engineered prodrug-converting enzyme with substantially enhanced efficacy for targeted cell ablation. Nature Methods. 19:205-215
Tchivelekete, G.M., Almarhoun, M., Cao, Y., Zhou, X., Martin, P.E., Shu, X. (2022) Evaluation of okadaic acid toxicity in human retinal cells and zebrafish retinas. Toxicology. 473:153209
Wang, J., Thomas, H.R., Thompson, R.G., Waldrep, S.C., Fogerty, J., Song, P., Li, Z., Ma, Y., Santra, P., Hoover, J.D., Yeo, N.C., Drummond, I.A., Yoder, B.K., Amack, J.D., Perkins, B., Parant, J.M. (2022) Variable phenotypes and penetrance between and within different zebrafish ciliary transition zone mutants. Disease models & mechanisms. 15(12):
Brandli, A., Dudczig, S., Currie, P.D., Jusuf, P.R. (2021) Photoreceptor ablation following ATP induced injury triggers Müller glia driven regeneration in zebrafish. Experimental Eye Research. 207:108569
Clark, B.S., Miesfeld, J.B., Flinn, M.A., Collery, R.F., Link, B.A. (2021) Dynamic Polarization of Rab11a Modulates Crb2a Localization and Impacts Signaling to Regulate Retinal Neurogenesis. Frontiers in cell and developmental biology. 8:608112
Crouzier, L., Denus, M., Richard, E.M., Tavernier, A., Diez, C., Cubedo, N., Maurice, T., Delprat, B. (2021) Sigma-1 Receptor Is Critical for Mitochondrial Activity and Unfolded Protein Response in Larval Zebrafish. International Journal of Molecular Sciences. 22(20):
Crouzier, L., Diez, C., Richard, E.M., Cubedo, N., Barbereau, C., Rossel, M., Delaunay, T., Maurice, T., Delprat, B. (2021) Loss of Pde6a Induces Rod Outer Segment Shrinkage and Visual Alterations in pde6aQ70X Mutant Zebrafish, a Relevant Model of Retinal Dystrophy. Frontiers in cell and developmental biology. 9:675517
Dhakal, S., Rotem-Bamberger, S., Sejd, J.R., Sebbagh, M., Ronin, N., Frey, R.A., Beitsch, M., Batty, M., Taler, K., Blackerby, J.F., Inbal, A., Stenkamp, D.L. (2021) Selective Requirements for Vascular Endothelial Cells and Circulating Factors in the Regulation of Retinal Neurogenesis. Frontiers in cell and developmental biology. 9:628737
Fan, X., Yang, H., Hu, L., Wang, D., Wang, R., Hao, A., Chen, X. (2021) Propofol impairs specification of retinal cell types in zebrafish by inhibiting Zisp-mediated Noggin-1 palmitoylation and trafficking. Stem Cell Research & Therapy. 12:195
Fu, J., Han, N., Jiao, J., Shi, G. (2021) Effects of Embryonic Exposure to Ethanol on Zebrafish Survival, Growth Pattern, Locomotor Activity and Retinal Development. Alternative therapies in health and medicine. 27(5):120-128
Guo, R., Ge, K., Wang, Y., Lu, M., Li, F., Tian, L., Gan, L., Sheng, D. (2021) LIM Homeobox 4 (lhx4) regulates retinal neural differentiation and visual function in zebrafish. Scientific Reports. 11:1977
Guo, R., Li, F., Lu, M., Ge, K., Gan, L., Sheng, D. (2021) LIM Homeobox 9 Knockdown by Morpholino does not Affect Zebrafish Retinal Development. Biology Open. 10(3):
Hao, Q., Zheng, M., Weng, K., Hao, Y., Zhou, Y., Lin, Y., Gao, F., Kou, Z., Kawamura, S., Yao, K., Xu, P., Chen, J., Zou, J. (2021) Crumbs proteins stabilize the cone mosaics of photoreceptors and improve vision in zebrafish. Journal of genetics and genomics = Yi chuan xue bao. 48(1):52-62
Jin, M., Li, J., Hu, R., Xu, B., Huang, G., Huang, W., Chen, B., He, J., Cao, Y. (2021) Cyclin A2/cyclin-dependent kinase 1-dependent phosphorylation of Top2a is required for S phase entry during retinal development in zebrafish. Journal of genetics and genomics = Yi chuan xue bao. 48(1):63-74
Lahne, M., Brecker, M., Jones, S.E., Hyde, D.R. (2021) The Regenerating Adult Zebrafish Retina Recapitulates Developmental Fate Specification Programs. Frontiers in cell and developmental biology. 8:617923
Li, J., Liu, F., Lv, Y., Sun, K., Zhao, Y., Reilly, J., Zhang, Y., Tu, J., Yu, S., Liu, X., Qin, Y., Huang, Y., Gao, P., Jia, D., Chen, X., Han, Y., Shu, X., Luo, D., Tang, Z., Liu, M. (2021) Prpf31 is essential for the survival and differentiation of retinal progenitor cells by modulating alternative splicing. Nucleic acids research. 49(4):2027-2043
Li, X., Alhasani, R.H., Cao, Y., Zhou, X., He, Z., Zeng, Z., Strang, N., Shu, X. (2021) Gypenosides Alleviate Cone Cell Death in a Zebrafish Model of Retinitis Pigmentosa. Antioxidants (Basel, Switzerland). 10(7):
Lourenço, R., Brandão, A.S., Borbinha, J., Gorgulho, R., Jacinto, A. (2021) Yap Regulates Müller Glia Reprogramming in Damaged Zebrafish Retinas. Frontiers in cell and developmental biology. 9:667796
Mathieu, H., Patten, S.A., Aragon-Martin, J.A., Ocaka, L., Simpson, M., Child, A., Moldovan, F. (2021) Genetic variant of TTLL11 gene and subsequent ciliary defects are associated with idiopathic scoliosis in a 5-generation UK family. Scientific Reports. 11:11026
Miles, A., Blair, C., Emili, A., Tropepe, V. (2021) Usher syndrome Type 1-associated gene, pcdh15b, is required for photoreceptor structural integrity in zebrafish. Disease models & mechanisms. 14(12):
Ogawa, Y., Shiraki, T., Fukada, Y., Kojima, D. (2021) Foxq2 determines blue cone identity in zebrafish. Science advances. 7:eabi9784
Ranawat, N., Masai, I. (2021) Mechanisms underlying microglial colonization of developing neural retina in zebrafish. eLIFE. 10:
Schnur, R.E., Yousaf, S., Liu, J., Chung, W.K., Rhodes, L., Marble, M., Zambrano, R.M., Sobreira, N., Jayakar, P., Pierpont, M.E., Schultz, M.J., Pichurin, P.N., Olson, R.J., Graham, G.E., Osmond, M., Contreras-García, G.A., Campo-Neira, K.A., Peñaloza-Mantilla, C.A., Flage, M., Kuppa, S., Navarro, K., Sacoto, M.J.G., Wentzensen, I.M., Scarano, M.I., Juusola, J., Prada, C.E., Hufnagel, R.B. (2021) UBA2 variants underlie a recognizable syndrome with variable aplasia cutis congenita and ectrodactyly. Genetics in medicine : official journal of the American College of Medical Genetics. 23(9):1624-1635
Stenkamp, D.L., Viall, D.D., Mitchell, D.M. (2021) Evidence of regional specializations in regenerated zebrafish retina. Experimental Eye Research. 212:108789
Titialii-Torres, K.F., Morris, A.C. (2021) Embryonic hyperglycemia perturbs the development of specific retinal cell types, including photoreceptors. Journal of Cell Science. 135(1):
Turkalj, B., Quallich, D., Bessert, D.A., Kramer, A.C., Cook, T.A., Thummel, R. (2021) Development and characterization of a chronic photoreceptor degeneration model in adult zebrafish that does not trigger a regenerative response. Experimental Eye Research. 209:108630
Yoshimatsu, T., Bartel, P., Schröder, C., Janiak, F.K., St-Pierre, F., Berens, P., Baden, T. (2021) Ancestral circuits for vertebrate color vision emerge at the first retinal synapse. Science advances. 7:eabj6815
Zhang, L., Chen, C., Fu, J., Lilley, B., Berlinicke, C., Hansen, B., Ding, D., Wang, G., Wang, T., Shou, D., Ye, Y., Mulligan, T., Emmerich, K., Saxena, M.T., Hall, K.R., Sharrock, A.V., Brandon, C., Park, H., Kam, T.I., Dawson, V.L., Dawson, T.M., Shim, J.S., Hanes, J., Ji, H., Liu, J.O., Qian, J., Ackerley, D.F., Rohrer, B., Zack, D.J., Mumm, J.S. (2021) Large-scale phenotypic drug screen identifies neuroprotectants in zebrafish and mouse models of retinitis pigmentosa. eLIFE. 10:
Zhu, P., Xu, J., Wang, Y., Zhao, C. (2021) Loss of Ift74 Leads to Slow Photoreceptor Degeneration and Ciliogenesis Defects in Zebrafish. International Journal of Molecular Sciences. 22(17):
Ahrens, N., Elbers, D., Greb, H., Janssen-Bienhold, U., Koch, K.W. (2020) Interaction of G protein-coupled receptor kinases and recoverin isoforms is determined by localization in zebrafish photoreceptors. Biochimica et biophysica acta. Molecular cell research. 1868(4):118946
Ali, Z., Zang, J., Lagali, N., Schmitner, N., Salvenmoser, W., Mukwaya, A., Neuhauss, S.C.F., Jensen, L.D., Kimmel, R.A. (2020) Photoreceptor Degeneration Accompanies Vascular Changes in a Zebrafish Model of Diabetic Retinopathy. Investigative ophthalmology & visual science. 61:43
Ates, K.M., Wang, T., Moreland, T., Veeranan-Karmegam, R., Ma, M., Jeter, C., Anand, P., Wenzel, W., Kim, H.G., Wolfe, L.A., Stephen, J.A., Adams, D.R., Markello, T., Tifft, C.J., Settlage, R., Gahl, W.A., Gonsalvez, G.B., Malicdan, M.C., Flanagan-Steet, H., Pan, Y.A. (2020) Deficiency in the endocytic adaptor proteins PHETA1/2 impair renal and craniofacial development. Disease models & mechanisms. 13(5):
Campbell, L.J., Hobgood, J.S., Jia, M., Boyd, P., Hipp, R.I., Hyde, D.R. (2020) Notch3 and DeltaB maintain Müller glia quiescence and act as negative regulators of regeneration in the light-damaged zebrafish retina. Glia. 69(3):546-566
Coomer, C.E., Wilson, S.G., Titialii-Torres, K.F., Bills, J.D., Krueger, L.A., Petersen, R.A., Turnbaugh, E.M., Janesch, E.L., Morris, A.C. (2020) Her9/Hes4 is required for retinal photoreceptor development, maintenance, and survival. Scientific Reports. 10:11316
D'Orazi, F.D., Suzuki, S.C., Darling, N., Wong, R.O., Yoshimatsu, T. (2020) Conditional and biased regeneration of cone photoreceptor types in the zebrafish retina. The Journal of comparative neurology. 528(17):2816-2830
Deveau, C., Jiao, X., Suzuki, S.C., Krishnakumar, A., Yoshimatsu, T., Hejtmancik, J.F., Nelson, R.F. (2020) Thyroid hormone receptor beta mutations alter photoreceptor development and function in Danio rerio (zebrafish). PLoS Genetics. 16:e1008869
Guo, C., Deveau, C., Zhang, C., Nelson, R., Wei, X. (2020) Zebrafish Crb1, localizing uniquely to the cell membranes around cone photoreceptor axonemes, alleviates light damage to photoreceptors and modulates cones' light responsiveness. The Journal of neuroscience : the official journal of the Society for Neuroscience. 40(37):7065-7079
Henson, H.E., Taylor, M.R. (2020) A sart1 Zebrafish Mutant Results in Developmental Defects in the Central Nervous System. Cells. 9(11):
Khan, A.S., Friemel, T.D., Grillo, S.L., Stella, S.L. (2020) A short period of dark-adaptation is sufficient to generate light-induced photoreceptor degeneration in pigmented zebrafish. Neuroreport. 31:22-28
Kujawski, S., Crespo, C., Luz, M., Yuan, M., Winkler, S., Knust, E. (2020) Loss of Crb2b-lf leads to anterior segment defects in old zebrafish. Biology Open. 9(2):
Lee, M., Wan, J., Goldman, D. (2020) Tgfb3 collaborates with PP2A and Notch signaling pathways to inhibit retina regeneration. eLIFE. 9:
Lin, Y., Weng, K., Liang, J., Zhou, Y., Hao, Q., Hao, Y., Yao, K., Zou, J. (2020) The extracellular and intracellular regions of Crb2a play distinct roles in guiding the formation of the apical zonula adherens. Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie. 125:109942
Nadolski, N.J., Balay, S.D., Wong, C.X.L., Waskiewicz, A.J., Hocking, J.C. (2020) Abnormal Cone and Rod Photoreceptor Morphogenesis in gdf6a Mutant Zebrafish. Investigative ophthalmology & visual science. 61:9
Nishiwaki, Y., Masai, I. (2020) β-SNAP activity in the outer segment growth period is critical for preventing BNip1-dependent apoptosis in zebrafish photoreceptors. Scientific Reports. 10:17379
Oel, A.P., Neil, G.J., Dong, E.M., Balay, S.D., Collett, K., Allison, W.T. (2020) Nrl Is Dispensable for Specification of Rod Photoreceptors in Adult Zebrafish Despite Its Deeply Conserved Requirement Earlier in Ontogeny. iScience. 23:101805
Santhanam, A., Shihabeddin, E., Atkinson, J.A., Nguyen, D., Lin, Y.P., O'Brien, J. (2020) A Zebrafish Model of Retinitis Pigmentosa Shows Continuous Degeneration and Regeneration of Rod Photoreceptors. Cells. 9(10):
Silva, N.J., Nagashima, M., Li, J., Kakuk-Atkins, L., Ashrafzadeh, M., Hyde, D.R., Hitchcock, P.F. (2020) Inflammation and matrix metalloproteinase 9 (Mmp-9) regulate photoreceptor regeneration in adult zebrafish. Glia. 68(7):1445-1465
Song, P., Fogerty, J., Cianciolo, L.T., Stupay, R., Perkins, B.D. (2020) Cone Photoreceptor Degeneration and Neuroinflammation in the Zebrafish Bardet-Biedl Syndrome 2 (bbs2) Mutant Does Not Lead to Retinal Regeneration. Frontiers in cell and developmental biology. 8:578528
Sundaramurthi, H., Roche, S.L., Grice, G.L., Moran, A., Dillion, E.T., Campiani, G., Nathan, J.A., Kennedy, B.N. (2020) Selective Histone Deacetylase 6 Inhibitors Restore Cone Photoreceptor Vision or Outer Segment Morphology in Zebrafish and Mouse Models of Retinal Blindness. Frontiers in cell and developmental biology. 8:689
Volkov, L.I., Kim-Han, J.S., Saunders, L.M., Poria, D., Hughes, A.E.O., Kefalov, V.J., Parichy, D.M., Corbo, J.C. (2020) Thyroid hormone receptors mediate two distinct mechanisms of long-wavelength vision. Proceedings of the National Academy of Sciences of the United States of America. 117(26):15262-15269
Ward, R., Kaylor, J.J., Cobice, D.F., Pepe, D.A., McGarrigle, E.M., Brockerhoff, S.E., Hurley, J.B., Travis, G.H., Kennedy, B.N. (2020) Non-photopic and photopic visual cycles differentially regulate immediate, early and late-phases of cone photoreceptor-mediated vision. The Journal of biological chemistry. 295(19):6482-6497
Wolf, E.J., Miles, A., Lee, E.S., Nabeel-Shah, S., Greenblatt, J.F., Palazzo, A.F., Tropepe, V., Emili, A. (2020) MKRN2 Physically Interacts with GLE1 to Regulate mRNA Export and Zebrafish Retinal Development. Cell Reports. 31:107693
Zhao, G., Sun, H., Zhang, T., Liu, J.X. (2020) Copper induce zebrafish retinal developmental defects via triggering stresses and apoptosis. Cell communication and signaling : CCS. 18:45
Albadri, S., Naso, F., Thauvin, M., Gauron, C., Parolin, C., Duroure, K., Vougny, J., Fiori, J., Boga, C., Vriz, S., Calonghi, N., Del Bene, F. (2019) Redox Signaling via Lipid Peroxidation Regulates Retinal Progenitor Cell Differentiation. Developmental Cell. 50(1):73-89.e6
Fogerty, J., Stepanyan, R., Cianciolo, L.T., Tooke, B.P., Perkins, B.D. (2019) Genomic non-redundancy of the mir-183/96/182 cluster and its requirement for hair cell maintenance. Scientific Reports. 9:10302
Gath, N., Gross, J.M. (2019) Zebrafish mab21l2 mutants possess severe defects in optic cup morphogenesis, lens and cornea development. Developmental Dynamics : an official publication of the American Association of Anatomists. 248(7):514-529
Hanovice, N.J., Leach, L.L., Slater, K., Gabriel, A.E., Romanovicz, D., Shao, E., Collery, R., Burton, E.A., Lathrop, K.L., Link, B.A., Gross, J.M. (2019) Regeneration of the zebrafish retinal pigment epithelium after widespread genetic ablation. PLoS Genetics. 15:e1007939
Hu, R., Huang, W., Liu, J., Jin, M., Wu, Y., Li, J., Wang, J., Yu, Z., Wang, H., Cao, Y. (2019) Mutagenesis of putative ciliary genes with the CRISPR/Cas9 system in zebrafish identifies genes required for retinal development. FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 33(4):5248-5256
Iribarne, M., Hyde, D.R., Masai, I. (2019) TNFα Induces Müller Glia to Transition From Non-proliferative Gliosis to a Regenerative Response in Mutant Zebrafish Presenting Chronic Photoreceptor Degeneration. Frontiers in cell and developmental biology. 7:296
Kujawski, S., Sonawane, M., Knust, E. (2019) penner/lgl2 is required for the integrity of the photoreceptor layer in the zebrafish retina. Biology Open. 8(4):
Lessieur, E.M., Song, P., Nivar, G.C., Piccillo, E.M., Fogerty, J., Rozic, R., Perkins, B.D. (2019) Ciliary genes arl13b, ahi1 and cc2d2a differentially modify expression of visual acuity phenotypes but do not enhance retinal degeneration due to mutation of cep290 in zebrafish. PLoS One. 14:e0213960
Li, G., Jin, D., Zhong, T.P. (2019) Tubgcp3 Is Required for Retinal Progenitor Cell Proliferation During Zebrafish Development. Frontiers in molecular neuroscience. 12:126
Li, W., Jin, D., Zhong, T.P. (2019) Photoreceptor cell development requires prostaglandin signaling in the zebrafish retina. Biochemical and Biophysical Research Communications. 510(2):230-235
Ma 马漫修, M., Ramirez, A.D., Wang 王彤, T., Roberts, R.L., Harmon, K.E., Schoppik, D., Sharma, A., Kuang, C., Goei, S.L., Gagnon, J.A., Zimmerman, S., Tsai, S.Q., Reyon, D., Joung, J.K., Aksay, E.R.F., Schier, A.F., Pan 潘於勤, Y.A. (2019) Zebrafish dscaml1 Deficiency Impairs Retinal Patterning and Oculomotor Function. The Journal of neuroscience : the official journal of the Society for Neuroscience. 40(1):143-158
McGinn, T.E., Galicia, C.A., Leoni, D.C., Partington, N., Mitchell, D.M., Stenkamp, D.L. (2019) Rewiring the Regenerated Zebrafish Retina: Reemergence of Bipolar Neurons and Cone-Bipolar Circuitry Following an Inner Retinal Lesion. Frontiers in cell and developmental biology. 7:95
Nagashima, M., D'Cruz, T.S., Danku, A.E., Hesse, D., Sifuentes, C., Raymond, P.A., Hitchcock, P.F. (2019) Midkine-a is required for cell cycle progression of Müller glia glia during neuronal regeneration in the vertebrate retina. The Journal of neuroscience : the official journal of the Society for Neuroscience. 40(6):1232-1247
Ogawa, Y., Shiraki, T., Asano, Y., Muto, A., Kawakami, K., Suzuki, Y., Kojima, D., Fukada, Y. (2019) Six6 and Six7 coordinately regulate expression of middle-wavelength opsins in zebrafish. Proceedings of the National Academy of Sciences of the United States of America. 116(10):4651-4660
Ouyang, J., Sun, W., Xiao, X., Li, S., Jia, X., Zhou, L., Wang, P., Zhang, Q. (2019) CPSF1 mutations are associated with early-onset high myopia and involved in retinal ganglion cell axon projection. Human molecular genetics. 28(12):1959-1970
Schlegel, D.K., Glasauer, S.M.K., Mateos, J.M., Barmettler, G., Ziegler, U., Neuhauss, S.C.F. (2019) A New Zebrafish Model for CACNA2D4-Dysfunction. Investigative ophthalmology & visual science. 60:5124-5135
Taylor, S.M., Giuffre, E., Moseley, P., Hitchcock, P.F. (2019) The microRNA, miR-18a, regulates NeuroD and photoreceptor differentiation in the retina of the zebrafish. Developmental Neurobiology. 79(2):202-219
Turner, K.J., Hoyle, J., Valdivia, L.E., Cerveny, K.L., Hart, W., Mangoli, M., Geisler, R., Rees, M., Houart, C., Poole, R.J., Wilson, S.W., Gestri, G. (2019) Abrogation of Stem Loop Binding Protein (Slbp) function leads to a failure of cells to transition from proliferation to differentiation, retinal coloboma and midline axon guidance deficits. PLoS One. 14:e0211073
Wang, Y., Liu, W., Yuan, B., Yin, X., Li, Y., Li, Z., Cui, J., Yuan, X., Li, Y. (2019) The Application of Methylprednisolone Nanoscale Zirconium-Porphyrin Metal-Organic Framework (MPS-NPMOF) in the Treatment of Photoreceptor Degeneration. International Journal of Nanomedicine. 14:9763-9776
Zhuang, Y.Y., Xiang, L., Wen, X.R., Shen, R.J., Zhao, N., Zheng, S.S., Han, R.Y., Qu, J., Lu, F., Jin, Z.B. (2019) Slc7a14 Is Indispensable in Zebrafish Retinas. Frontiers in cell and developmental biology. 7:333
Ackerman, C.M., Weber, P.K., Xiao, T., Thai, B., Kuo, T.J., Zhang, E., Pett-Ridge, J., Chang, C.J. (2018) Multimodal LA-ICP-MS and nanoSIMS imaging enables copper mapping within photoreceptor megamitochondria in a zebrafish model of Menkes disease. Metallomics : integrated biometal science. 10(3):474-485
Cai, S., Chen, Y., Shang, Y., Cui, J., Li, Z., Li, Y. (2018) Knockout of zebrafish interleukin 7 receptor (IL7R) by the CRISPR/Cas9 system delays retinal neurodevelopment. Cell Death & Disease. 9:273
Coomer, C.E., Morris, A.C. (2018) Capn5 Expression in the Healthy and Regenerating Zebrafish Retina. Investigative ophthalmology & visual science. 59:3643-3654
Elsaeidi, F., Macpherson, P., Mills, E.A., Jui, J., Flannery, J.G., Goldman, D. (2018) Notch suppression collaborates with Ascl1 and Lin28 to unleash a regenerative response in fish retina, but not in mice. The Journal of neuroscience : the official journal of the Society for Neuroscience. 38(9):2246-2261
Fu, J., Nagashima, M., Guo, C., Raymond, P.A., Wei, X. (2018) Novel Animal Model of Crumbs-Dependent Progressive Retinal Degeneration That Targets Specific Cone Subtypes. Investigative ophthalmology & visual science. 59:505-518
Greb, H., Klaassen, L.J., Schultz, K., Kamermans, M., Zoidl, G., Weiler, R., Janssen-Bienhold, U. (2018) An alternative splice variant of zebrafish cx52.6 is expressed in retinal horizontal cells. Neuroscience. 388:191-202
Huang, D.F., Wang, M.Y., Yin, W., Ma, Y.Q., Wang, H., Xue, T., Ren, D.L., Hu, B. (2018) Zebrafish Lacking Circadian Gene per2 Exhibit Visual Function Deficiency.. Frontiers in behavioral neuroscience. 12:53
Huang, X.F., Xiang, L., Cheng, W., Cheng, F.F., He, K.W., Zhang, B.W., Zheng, S.S., Han, R.Y., Zheng, Y.H., Xu, X.T., Yu, H.Y., Zhuang, W., Leung, Y.F., Jin, Z.B. (2018) Mutation of IPO13 causes recessive ocular coloboma, microphthalmia, and cataract. Experimental & molecular medicine. 50:53
Julien, D.P., Chan, A.W., Barrios, J., Mathiaparanam, J., Douglass, A., Wolman, M.A., Sagasti, A. (2018) Zebrafish expression reporters and mutants reveal that the IgSF cell adhesion molecule Dscamb is required for feeding and survival. Journal of neurogenetics. 32(4):336-352
Li, L., Jiao, X., D'Atri, I., Ono, F., Nelson, R., Chan, C.C., Nakaya, N., Ma, Z., Ma, Y., Cai, X., Zhang, L., Lin, S., Hameed, A., Chioza, B.A., Hardy, H., Arno, G., Hull, S., Khan, M.I., Fasham, J., Harlalka, G.V., Michaelides, M., Moore, A.T., Coban Akdemir, Z.H., Jhangiani, S., Lupski, J.R., Cremers, F.P.M., Qamar, R., Salman, A., Chilton, J., Self, J., Ayyagari, R., Kabir, F., Naeem, M.A., Ali, M., Akram, J., Sieving, P.A., Riazuddin, S., Baple, E.L., Riazuddin, S.A., Crosby, A.H., Hejtmancik, J.F. (2018) Mutation in the intracellular chloride channel CLCC1 associated with autosomal recessive retinitis pigmentosa. PLoS Genetics. 14:e1007504
Liao, M.L., Peng, W.H., Kan, D., Chien, C.L. (2018) Distribution patterns of the zebrafish neuronal intermediate filaments inaa and inab. Journal of neuroscience research. 97(2):202-214
Lust, K., Wittbrodt, J. (2018) Activating the regenerative potential of Müller glia cells in a regeneration-deficient retina. eLIFE. 7
Miller, A.H., Howe, H.B., Krause, B.M., Friedle, S.A., Banks, M.I., Perkins, B.D., Wolman, M.A. (2018) Pregnancy associated plasma protein-aa (Pappaa) regulates photoreceptor synaptic development to mediate visually guided behavior. The Journal of neuroscience : the official journal of the Society for Neuroscience. 38(22):5220-5236
Minegishi, Y., Nakaya, N., Tomarev, S.I. (2018) Mutation in the Zebrafish cct2 Gene Leads to Abnormalities of Cell Cycle and Cell Death in the Retina: A Model of CCT2-Related Leber Congenital Amaurosis. Investigative ophthalmology & visual science. 59:995-1004
Mitchell, D.M., Lovel, A.G., Stenkamp, D.L. (2018) Dynamic changes in microglial and macrophage characteristics during degeneration and regeneration of the zebrafish retina. Journal of neuroinflammation. 15:163
Muralidharan, P., Sarmah, S., Marrs, J.A. (2018) Retinal Wnt signaling defect in a zebrafish fetal alcohol spectrum disorder model. PLoS One. 13:e0201659
Naharros, I.O., Cristian, F.B., Zang, J., Gesemann, M., Ingham, P.W., Neuhauss, S.C.F., Bachmann-Gagescu, R. (2018) The ciliopathy protein TALPID3/KIAA0586 acts upstream of Rab8 activation in zebrafish photoreceptor outer segment formation and maintenance. Scientific Reports. 8:2211
Ranski, A.H., Kramer, A.C., Morgan, G.W., Perez, J.L., Thummel, R. (2018) Characterization of retinal regeneration in adult zebrafish following multiple rounds of phototoxic lesion. PeerJ. 6:e5646
Schredelseker, T., Driever, W. (2018) Bsx controls pineal complex development. Development (Cambridge, England). 145(13):
Unal Eroglu, A., Mulligan, T.S., Zhang, L., White, D.T., Sengupta, S., Nie, C., Lu, N.Y., Qian, J., Xu, L., Pei, W., Burgess, S.M., Saxena, M.T., Mumm, J.S. (2018) Multiplexed CRISPR/Cas9 Targeting of Genes Implicated in Retinal Regeneration and Degeneration. Frontiers in cell and developmental biology. 6:88
Yi, Z., Ouyang, J., Sun, W., Xiao, X., Li, S., Jia, X., Wang, P., Zhang, Q. (2018) Biallelic mutations in USP45, encoding a deubiquitinating enzyme, are associated with Leber congenital amaurosis. Journal of Medical Genetics. 56(5):325-331
Zelinka, C.P., Sotolongo-Lopez, M., Fadool, J.M. (2018) Targeted disruption of the endogenous zebrafish rhodopsin locus as models of rapid rod photoreceptor degeneration.. Molecular Vision. 24:587-602
Zhang, Y., Wang, Z., Zhao, G., Liu, J.X. (2018) Silver nanoparticles affect lens rather than retina development in zebrafish embryos. Ecotoxicology and environmental safety. 163:279-288
Zimmermann, M.J.Y., Nevala, N.E., Yoshimatsu, T., Osorio, D., Nilsson, D.E., Berens, P., Baden, T. (2018) Zebrafish Differentially Process Color across Visual Space to Match Natural Scenes. Current biology : CB. 28(13):2018-2032.e5
Cenedese, V., de Graaff, W., Csikós, T., Poovayya, M., Zoidl, G., Kamermans, M. (2017) Pannexin 1 Is Critically Involved in Feedback from Horizontal Cells to Cones. Frontiers in molecular neuroscience. 10:403
Chen, X., Sheng, X., Zhuang, W., Sun, X., Liu, G., Shi, X., Huang, G., Mei, Y., Li, Y., Pan, X., Liu, Y., Li, Z., Zhao, Q., Yan, B., Zhao, C. (2017) GUCA1A mutation causes maculopathy in a five-generation family with a wide spectrum of severity. Genetics in medicine : official journal of the American College of Medical Genetics. 19(8):945-954
Fang, W., Guo, C., Wei, X. (2017) Rainbow Enhancers Regulate Restrictive Transcription in Teleost Green, Red, and Blue Cones.. The Journal of neuroscience : the official journal of the Society for Neuroscience. 37(11):2834-2848
Feng, D., Chen, Z., Yang, K., Miao, S., Xu, B., Kang, Y., Xie, H., Zhao, C. (2017) The cytoplasmic tail of rhodopsin triggers rapid rod degeneration in kinesin-2 mutants. The Journal of biological chemistry. 292(42):17375-17386
Fu, J., Jiao, J., Weng, K., Yu, D., Li, R. (2017) Zebrafish methanol exposure causes patterning defects and suppressive cell proliferation in retina. American journal of translational research. 9:2975-2983
Gorsuch, R.A., Lahne, M., Yarka, C.E., Petravick, M.E., Li, J., Hyde, D.R. (2017) Sox2 regulates Müller glia reprogramming and proliferation in the regenerating zebrafish retina via Lin28 and Ascl1a. Experimental Eye Research. 161:174-192
Greb, H., Hermann, S., Dirks, P., Ommen, G., Kretschmer, V., Schultz, K., Zoidl, G., Weiler, R., Janssen-Bienhold, U. (2017) Complexity of Gap Junctions between Horizontal Cells of The Carp Retina. Neuroscience. 340:8-22
Iribarne, M., Nishiwaki, Y., Nakamura, S., Araragi, M., Oguri, E., Masai, I. (2017) Aipl1 is required for cone photoreceptor function and survival through the stability of Pde6c and Gc3 in zebrafish. Scientific Reports. 7:45962
Jia, L., Raghupathy, R.K., Albalawi, A., Zhao, Z., Reilly, J., Xiao, Q., Shu, X. (2017) A colour preference technique to evaluate acrylamide-induced toxicity in zebrafish. Comparative biochemistry and physiology. Toxicology & pharmacology : CBP. 199:11-19
Lessieur, E.M., Fogerty, J., Gaivin, R.J., Song, P., Perkins, B.D. (2017) The Ciliopathy Gene ahi1 Is Required for Zebrafish Cone Photoreceptor Outer Segment Morphogenesis and Survival. Investigative ophthalmology & visual science. 58:448-460
Li, H., Pei, W., Vergarajauregui, S., Zerfas, P.M., Raben, N., Burgess, S.M., Puertollano, R. (2017) Novel Degenerative and Developmental Defects in a Zebrafish Model of Mucolipidosis Type IV. Human molecular genetics. 26(14):2701-2718
McGinn, T.E., Mitchell, D.M., Meighan, P.C., Partington, N., Leoni, D.C., Jenkins, C.E., Varnum, M.D., Stenkamp, D.L. (2017) Restoration of Dendritic Complexity, Functional Connectivity, and Diversity of Regenerated Retinal Bipolar Neurons in Adult Zebrafish. The Journal of neuroscience : the official journal of the Society for Neuroscience. 38(1):120-136
Nakaya, N., Sultana, A., Tomarev, S.I. (2017) Impaired AMPA receptor trafficking by a double knockout of zebrafish olfactomedin1a/b. Journal of neurochemistry. 143(6):635-644
Niklaus, S., Cadetti, L., Vom Berg-Maurer, C.M., Lehnherr, A., Hotz, A.L., Forster, I.C., Gesemann, M., Neuhauss, S.C.F. (2017) Shaping of Signal Transmission at the Photoreceptor Synapse by EAAT2 Glutamate Transporters. eNeuro. 4(3)
Noel, N.C.L., Allison, W.T. (2017) Connectivity of cone photoreceptor telodendria in the zebrafish retina. The Journal of comparative neurology. 526(4):609-625
Prieto, D., Zolessi, F.R. (2017) Functional Diversification of the Four MARCKS Family Members in Zebrafish Neural Development. Journal of experimental zoology. Part B, Molecular and developmental evolution. 328(1-2):119-138
Raghupathy, R.K., Zhang, X., Liu, F., Alhasani, R.H., Biswas, L., Akhtar, S., Pan, L., Moens, C.B., Li, W., Liu, M., Kennedy, B.N., Shu, X. (2017) Rpgrip1 is required for rod outer segment development and ciliary protein trafficking in zebrafish. Scientific Reports. 7:16881
Seritrakul, P., Gross, J.M. (2017) Tet-mediated DNA hydroxymethylation regulates retinal neurogenesis by modulating cell-extrinsic signaling pathways. PLoS Genetics. 13:e1006987
Thomas, J.L., Morgan, G.W., Dolinski, K.M., Thummel, R. (2017) Characterization of the pleiotropic roles of Sonic Hedgehog during retinal regeneration in adult zebrafish. Experimental Eye Research. 166:106-115
Van De Weghe, J.C., Rusterholz, T.D.S., Latour, B., Grout, M.E., Aldinger, K.A., Shaheen, R., Dempsey, J.C., Maddirevula, S., Cheng, Y.H., Phelps, I.G., Gesemann, M., Goel, H., Birk, O.S., Alanzi, T., Rawashdeh, R., Khan, A.O., Bamshad, M.J., Nickerson, D.A., Neuhauss, S.C.F., Dobyns, W.B., Alkuraya, F.S., Roepman, R., Bachmann-Gagescu, R., Doherty, D. (2017) Mutations in ARMC9, which Encodes a Basal Body Protein, Cause Joubert Syndrome in Humans and Ciliopathy Phenotypes in Zebrafish. American journal of human genetics. 101(1):23-36
Walsh, C.E., Hitchcock, P.F. (2017) Progranulin regulates neurogenesis in the developing vertebrate retina. Developmental Neurobiology. 77(9):1114-1129
Wang, Y.J., Cai, S.J., Cui, J.L., Chen, Y., Tang, X., Li, Y.H. (2017) Correlation between photoreceptor injury-regeneration and behavior in a zebrafish model. Neural regeneration research. 12:795-803
Yang, X., Fu, J., Wei, X. (2017) Expression patterns of zebrafish nocturnin genes and the transcriptional activity of the frog nocturnin promoter in zebrafish rod photoreceptors.. Molecular Vision. 23:1039-1047
Biswas, P., Chavali, V.R., Agnello, G., Stone, E., Chakarova, C., Duncan, J.L., Kannabiran, C., Homsher, M., Bhattacharya, S.S., Naeem, M.A., Kimchi, A., Sharon, D., Iwata, T., Riazuddin, S., Reddy, G.B., Hejtmancik, J.F., Gerogiou, G., Riazuddin, S.A., Ayyagari, R. (2016) A missense mutation in the ASRGL1 gene is involved in causing autosomal recessive retinal degeneration. Human molecular genetics. 25(12):2483-2497
Boubakri, M., Chaya, T., Hirata, H., Kajimura, N., Kuwahara, R., Ueno, A., Malicki, J., Furukawa, T., Omori, Y. (2016) Loss of ift122, a Retrograde IFT Complex Component, Leads to Slow, Progressive Photoreceptor Degeneration Due to Inefficient Opsin Transport. The Journal of biological chemistry. 291(47):24465-24474
Daniele, L.L., Emran, F., Lobo, G.P., Gaivin, R.J., Perkins, B.D. (2016) Mutation of wrb, a Component of the Guided Entry of Tail-Anchored Protein Pathway, Disrupts Photoreceptor Synapse Structure and Function. Investigative ophthalmology & visual science. 57:2942-54
Hagerman, G.F., Noel, N.C., Cao, S.Y., DuVal, M.G., Oel, A.P., Allison, W.T. (2016) Rapid Recovery of Visual Function Associated with Blue Cone Ablation in Zebrafish. PLoS One. 11:e0166932
Houbrechts, A.M., Vergauwen, L., Bagci, E., Van Houcke, J., Heijlen, M., Kulemeka, B., Hyde, D.R., Knapen, D., Darras, V.M. (2016) Deiodinase knockdown affects zebrafish eye development at the level of gene expression, morphology and function. Molecular and Cellular Endocrinology. 424:81-93
Khuansuwan, S., Clanton, J.A., Dean, B.J., Patton, J.G., Gamse, J.T. (2016) A transcription factor network controls cell migration and fate decisions in the developing zebrafish pineal complex. Development (Cambridge, England). 143(14):2641-50
Lagman, D., Franzén, I.E., Eggert, J., Larhammar, D., Abalo, X.M. (2016) Evolution and expression of the phosphodiesterase 6 genes unveils vertebrate novelty to control photosensitivity. BMC Evolutionary Biology. 16:124
Lei, X.D., Sun, Y., Cai, S.J., Fang, Y.W., Cui, J.L., Li, Y.H. (2016) Role of tumor necrosis factor-alpha in zebrafish retinal neurogenesis and myelination. International journal of ophthalmology. 9:831-7
Liao, M.L., Peng, W.H., Kan, D., Chien, C.L. (2016) Developmental Pattern of the Neuronal Intermediate Filament inaa in the Zebrafish Retina. The Journal of comparative neurology. 524(18):3810-3826
Olsen, J.B., Wong, L., Deimling, S., Miles, A., Guo, H., Li, Y., Zhang, Z., Greenblatt, J.F., Emili, A., Tropepe, V. (2016) G9a and ZNF644 Physically Associate to Suppress Progenitor Gene Expression during Neurogenesis. Stem Cell Reports. 7(3):454-70
Pooranachandran, N., Malicki, J.J. (2016) Unexpected Roles for Ciliary Kinesins and Intraflagellar Transport Proteins. Genetics. 203(2):771-85
Powell, C., Cornblath, E., Elsaeidi, F., Wan, J., Goldman, D. (2016) Zebrafish Müller glia-derived progenitors are multipotent, exhibit proliferative biases and regenerate excess neurons. Scientific Reports. 6:24851
Raghupathy, R.K., Zhang, X., Alhasani, R.H., Zhou, X., Mullin, M., Reilly, J., Li, W., Liu, M., Shu, X. (2016) Abnormal photoreceptor outer segment development and early retinal degeneration in kif3a mutant zebrafish. Cell biochemistry and function. 34(6):429-40
Rainy, N., Etzion, T., Alon, S., Pomeranz, A., Nisgav, Y., Livnat, T., Bach, M., Gerstner, C.D., Baehr, W., Gothilf, Y., Stiebel-Kalish, H. (2016) Knockdown of unc119c results in visual impairment and early-onset retinal dystrophy in zebrafish. Biochemical and Biophysical Research Communications. 473(4):1211-7
Saito, Y., Tsuruma, K., Shimazawa, M., Nishimura, Y., Tanaka, T., Hara, H. (2016) Establishment of a drug evaluation model against light-induced retinal degeneration using adult pigmented zebrafish. Journal of Pharmacological Sciences. 131(3):215-8
Song, P., Dudinsky, L., Fogerty, J., Gaivin, R., Perkins, B.D. (2016) Arl13b Interacts With Vangl2 to Regulate Cilia and Photoreceptor Outer Segment Length in Zebrafish. Investigative ophthalmology & visual science. 57:4517-4526
Sotolongo-Lopez, M., Alvarez-Delfin, K., Saade, C.J., Vera, D.L., Fadool, J.M. (2016) Genetic Dissection of Dual Roles for the Transcription Factor six7 in Photoreceptor Development and Patterning in Zebrafish. PLoS Genetics. 12:e1005968
Sun, Y., Zhang, G., He, Z., Wang, Y., Cui, J., Li, Y. (2016) Effects of copper oxide nanoparticles on developing zebrafish embryos and larvae. International Journal of Nanomedicine. 11:905-18
Thomas, J.L., Ranski, A.H., Morgan, G.W., Thummel, R. (2016) Reactive Gliosis in the Adult Zebrafish Retina. Experimental Eye Research. 143:98-109
Wilson, S.G., Wen, W., Kastoori, L.P., Morris, A.C. (2016) Tracking the fate of her4 expressing cells in the regenerating retina using her4:Kaede zebrafish. Experimental Eye Research. 145:75-87
Yoshimatsu, T., D'Orazi, F.D., Gamlin, C.R., Suzuki, S.C., Suli, A., Kimelman, D., Raible, D.W., Wong, R.O. (2016) Presynaptic partner selection during retinal circuit reassembly varies with timing of neuronal regeneration in vivo. Nature communications. 7:10590
Zhang, J., Wang, C., Shen, Y., Chen, N., Wang, L., Liang, L., Guo, T., Yin, X., Ma, Z., Zhang, B., Yang, L. (2016) A mutation in ADIPOR1 causes nonsyndromic autosomal dominant retinitis pigmentosa. Human genetics. 135(12):1375-1387
Zhang, L., Xiang, L., Liu, Y., Venkatraman, P., Chong, L., Cho, J., Bonilla, S., Jin, Z.B., Pang, C.P., Ko, K.M., Ma, P., Zhang, M., Leung, Y.F. (2016) A Naturally-Derived Compound Schisandrin B Enhanced Light Sensation in the pde6c Zebrafish Model of Retinal Degeneration. PLoS One. 11:e0149663
Babino, D., Perkins, B.D., Kindermann, A., Oberhauser, V., von Lintig, J. (2015) The role of 11-cis-retinyl esters in vertebrate cone vision. FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 29(1):216-26
Gramage, E., D'Cruz, T., Taylor, S., Thummel, R., Hitchcock, P.F. (2015) Midkine-a Protein Localization in the Developing and Adult Retina of the Zebrafish and Its Function During Photoreceptor Regeneration. PLoS One. 10:e0121789
Li, X., Li, X., Li, Y.X., Zhang, Y., Chen, D., Sun, M.Z., Zhao, X., Chen, D.Y., Feng, X.Z. (2015) The Difference between Anxiolytic and Anxiogenic Effects Induced by Acute and Chronic Alcohol Exposure and Changes in Associative Learning and Memory Based on Color Preference and the Cause of Parkinson-Like Behaviors in Zebrafish. PLoS One. 10:e0141134
Liu, F., Chen, J., Yu, S., Raghupathy, R.K., Liu, X., Qin, Y., Li, C., Huang, M., Liao, S., Wang, J., Zou, J., Shu, X., Tang, Z., Liu, M. (2015) Knockout of RP2 decreases GRK1 and rod transducin subunits and leads to photoreceptor degeneration in zebrafish. Human molecular genetics. 24(16):4648-59
Liu, Y., Chen, X., Qin, B., Zhao, K., Zhao, Q., Staley, J.P., Zhao, C. (2015) Knocking Down Snrnp200 Initiates Demorphogenesis of Rod Photoreceptors in Zebrafish. Journal of ophthalmology. 2015:816329
Liu, Y., Chen, X., Xu, Q., Gao, X., Tam, P.O., Zhao, K., Zhang, X., Chen, L.J., Jia, W., Zhao, Q., Vollrath, D., Pang, C.P., Zhao, C. (2015) SPP2 Mutations Cause Autosomal Dominant Retinitis Pigmentosa. Scientific Reports. 5:14867
MacDonald, R.B., Randlett, O., Oswald, J., Yoshimatsu, T., Franze, K., Harris, W.A. (2015) Müller glia provide essential tensile strength to the developing retina. The Journal of cell biology. 210:1075-83
Mitchell, D.M., Stevens, C.B., Frey, R.A., Hunter, S.S., Ashino, R., Kawamura, S., Stenkamp, D.L. (2015) Retinoic Acid Signaling Regulates Differential Expression of the Tandemly-Duplicated Long Wavelength-Sensitive Cone Opsin Genes in Zebrafish. PLoS Genetics. 11:e1005483
Muralidharan, P., Sarmah, S., Marrs, J.A. (2015) Zebrafish retinal defects induced by ethanol exposure are rescued by retinoic acid and folic acid supplement. Alcohol (Fayetteville, N.Y.). 49(2):149-63
Ogawa, Y., Shiraki, T., Kojima, D., Fukada, Y. (2015) Homeobox transcription factor Six7 governs expression of green opsin genes in zebrafish. Proceedings. Biological sciences. 282(1812):20150659
Olena, A.F., Rao, M.B., Thatcher, E.J., Wu, S.Y., Patton, J.G. (2015) miR-216a regulates snx5, a novel notch signaling pathway component, during zebrafish retinal development. Developmental Biology. 400(1):72-81
Scheidecker, S., Etard, C., Haren, L., Stoetzel, C., Hull, S., Arno, G., Plagnol, V., Drunat, S., Passemard, S., Toutain, A., Obringer, C., Koob, M., Geoffroy, V., Marion, V., Strähle, U., Ostergaard, P., Verloes, A., Merdes, A., Moore, A.T., Dollfus, H. (2015) Mutations in TUBGCP4 Alter Microtubule Organization via the γ-Tubulin Ring Complex in Autosomal-Recessive Microcephaly with Chorioretinopathy. American journal of human genetics. 96(4):666-74
Taylor, S.M., Alvarez-Delfin, K., Saade, C.J., Thomas, J.L., Thummel, R., Fadool, J.M., Hitchcock, P.F. (2015) The bHLH Transcription Factor NeuroD Governs Photoreceptor Genesis and Regeneration Through Delta-Notch Signaling. Investigative ophthalmology & visual science. 56:7496-7515
Wong, L., Power, N., Miles, A., Tropepe, V. (2015) Mutual antagonism of the paired-type homeobox genes, vsx2 and dmbx1, regulates retinal progenitor cell cycle exit upstream of ccnd1 expression. Developmental Biology. 402(2):216-28
Beck, B.B., Phillips, J.B., Bartram, M.P., Wegner, J., Thoenes, M., Pannes, A., Sampson, J., Heller, R., Göbel, H., Koerber, F., Neugebauer, A., Hedergott, A., Nürnberg, G., Nürnberg, P., Thiele, H., Altmüller, J., Toliat, M.R., Staubach, S., Boycott, K.M., Valente, E.M., Janecke, A.R., Eisenberger, T., Bergmann, C., Tebbe, L., Wang, Y., Wu, Y., Fry, A.M., Westerfield, M., Wolfrum, U., Bolz, H.J. (2014) Mutation of POC1B in a Severe Syndromic Retinal Ciliopathy. Human Mutation. 35(10):1153-62
Conner, C., Ackerman, K.M., Lahne, M., Hobgood, J.S., Hyde, D.R. (2014) Repressing Notch Signaling and Expressing TNFα Are Sufficient to Mimic Retinal Regeneration by Inducing Müller Glial Proliferation to Generate Committed Progenitor Cells. The Journal of neuroscience : the official journal of the Society for Neuroscience. 34(43):14403-19
Duval, M.G., Oel, A.P., Allison, W.T. (2014) gdf6a is required for cone photoreceptor subtype differentiation and for the actions of tbx2b in determining rod versus cone photoreceptor fate. PLoS One. 9:e92991
Henson, H.E., Parupalli, C., Ju, B., Taylor, M.R. (2014) Functional and genetic analysis of choroid plexus development in zebrafish. Frontiers in neuroscience. 8:364
Huang, L., Zuo, Z., Zhang, Y., Wu, M., Lin, J.J., Wang, C. (2014) Use of toxicogenomics to predict the potential toxic effect of Benzo(a)pyrene on zebrafish embryos: Ocular developmental toxicity. Chemosphere. 108:55-61
Imai, F., Yoshizawa, A., Matsuzaki, A., Oguri, E., Araragi, M., Nishiwaki, Y., Masai, I. (2014) Stem-loop binding protein is required for retinal cell proliferation, neurogenesis, and intraretinal axon pathfinding in zebrafish. Developmental Biology. 394(1):94-109
Jia, S., Muto, A., Orisme, W., Henson, H.E., Parupalli, C., Ju, B., Baier, H., and Taylor, M.R. (2014) Zebrafish Cacna1fa is required for cone photoreceptor function and synaptic ribbon formation. Human molecular genetics. 23(11):2981-94
Krock, B.L., Perkins, B.D. (2014) The Par-PrkC Polarity Complex Is Required for Cilia Growth in Zebrafish Photoreceptors. PLoS One. 9:e104661
Laranjeiro, R., Whitmore, D. (2014) Transcription factors involved in retinogenesis are co-opted by the circadian clock following photoreceptor differentiation. Development (Cambridge, England). 141(13):2644-56
Lee, C., Wallingford, J.B., Gross, J.M. (2014) cluap1 is essential for ciliogenesis and photoreceptor maintenance in the vertebrate eye. Investigative ophthalmology & visual science. 55(7):4585-92
Li, X., Liu, B., Li, X.L., Li, Y.X., Sun, M.Z., Chen, D.Y., Zhao, X., and Feng, X.Z. (2014) SiO2 nanoparticles change colour preference and cause Parkinson's-like behaviour in zebrafish. Scientific Reports. 4:3810
Martin, C.A., Ahmad, I., Klingseisen, A., Hussain, M.S., Bicknell, L.S., Leitch, A., Nürnberg, G., Toliat, M.R., Murray, J.E., Hunt, D., Khan, F., Ali, Z., Tinschert, S., Ding, J., Keith, C., Harley, M.E., Heyn, P., Müller, R., Hoffmann, I., Daire, V.C., Dollfus, H., Dupuis, L., Bashamboo, A., McElreavey, K., Kariminejad, A., Mendoza-Londono, R., Moore, A.T., Saggar, A., Schlechter, C., Weleber, R., Thiele, H., Altmüller, J., Höhne, W., Hurles, M.E., Noegel, A.A., Baig, S.M., Nürnberg, P., Jackson, A.P. (2014) Mutations in PLK4, encoding a master regulator of centriole biogenesis, cause microcephaly, growth failure and retinopathy. Nature Genetics. 46:1283-92
Moreau, K., Fleming, A., Imarisio, S., Lopez Ramirez, A., Mercer, J.L., Jimenez-Sanchez, M., Bento, C.F., Puri, C., Zavodszky, E., Siddiqi, F., Lavau, C.P., Betton, M., O'Kane, C.J., Wechsler, D.S., Rubinsztein, D.C. (2014) PICALM modulates autophagy activity and tau accumulation. Nature communications. 5:4998
Niu, X., Hong, J., Zheng, X., Melville, D.B., Knapik, E.W., Meng, A., Peng, J. (2014) The Nuclear Pore Complex Function of Sec13 Protein Is Required for Cell Survival during Retinal Development. The Journal of biological chemistry. 289:11971-85
Pillai-Kastoori, L., Wen, W., Wilson, S.G., Strachan, E., Lo-Castro, A., Fichera, M., Musumeci, S.A., Lehmann, O.J., Morris, A.C. (2014) Sox11 Is Required to Maintain Proper Levels of Hedgehog Signaling during Vertebrate Ocular Morphogenesis. PLoS Genetics. 10:e1004491
Rajaram, K., Summerbell, E.R., Patton, J.G. (2014) Technical brief: Constant intense light exposure to lesion and initiate regeneration in normally pigmented zebrafish. Molecular Vision. 20:1075-84
Raymond, P.A., Colvin, S.M., Jabeen, Z., Nagashima, M., Barthel, L.K., Hadidjojo, J., Popova, L., Pejaver, V.R., and Lubensky, D.K. (2014) Patterning the cone mosaic array in zebrafish retina requires specification of ultraviolet-sensitive cones. PLoS One. 9(1):e85325
Roosing, S., Lamers, I.J., de Vrieze, E., van den Born, L.I., Lambertus, S., Arts, H.H., POC1B Study Group, Peters, T.A., Hoyng, C.B., Kremer, H., Hetterschijt, L., Letteboer, S.J., van Wijk, E., Roepman, R., den Hollander, A.I., Cremers, F.P. (2014) Disruption of the Basal Body Protein POC1B Results in Autosomal-Recessive Cone-Rod Dystrophy. American journal of human genetics. 95(2):131-142
Viringipurampeer, I.A., Shan, X., Gregory-Evans, K., Zhang, J.P., Mohammadi, Z., and Gregory-Evans, C.Y. (2014) Rip3 knockdown rescues photoreceptor cell death in blind pde6c zebrafish. Cell death and differentiation. 21(11):1320-9
Wan, J., Zhao, X.F., Vojtek, A., Goldman, D. (2014) Retinal Injury, Growth Factors, and Cytokines Converge on β-Catenin and pStat3 Signaling to Stimulate Retina Regeneration. Cell Reports. 9(1):285-97
Wang, Y.J., He, Z.Z., Fang, Y.W., Xu, Y., Chen, Y.N., Wang, G.Q., Yang, Y.Q., Yang, Z., Li, Y.H. (2014) Effect of titanium dioxide nanoparticles on zebrafish embryos and developing retina. International journal of ophthalmology. 7:917-23
Wasfy, M.M., Matsui, J.I., Miller, J., Dowling, J.E., Perkins, B.D. (2014) myosin 7aa(-/-) mutant zebrafish show mild photoreceptor degeneration and reduced electroretinographic responses. Experimental Eye Research. 122:65-76
Wu, S.Y., de Borsetti, N.H., Bain, E.J., Bulow, C.R., and Gamse, J.T. (2014) Mediator subunit 12 coordinates intrinsic and extrinsic control of epithalamic development. Developmental Biology. 385(1):13-22
Wu, Y.C., Chen, R.F., Liu, C.Y., Hu, F.R., Huang, C.J., Wang, I.J. (2014) Knockdown of zebrafish blood vessel epicardial substance results in incomplete retinal lamination. TheScientificWorldJournal. 2014:803718
Yoshimatsu, T., Williams, P.R., D'Orazi, F.D., Suzuki, S.C., Fadool, J.M., Allison, W.T., Raymond, P.A., Wong, R.O. (2014) Transmission from the dominant input shapes the stereotypic ratio of photoreceptor inputs onto horizontal cells. Nature communications. 5:3699
Asai-Coakwell, M., March, L., Dai, X.H., Duval, M., Lopez, I., French, C.R., Famulski, J., De Baere, E., Francis, P.J., Sundaresan, P., Sauvé, Y., Koenekoop, R.K., Berry, F.B., Allison, W.T., Waskiewicz, A.J., and Lehmann, O.J. (2013) Contribution of growth differentiation factor 6-dependent cell survival to early-onset retinal dystrophies. Human molecular genetics. 22(7):1432-1442
Chen, Y., Londraville, R., Brickner, S., El-Shaar, L., Fankhauser, K., Dearth, C., Fulton, L., Sochacka, A., Bhattarai, S., Marrs, J.A., and Liu, Q. (2013) Protocadherin-17 function in zebrafish retinal development. Developmental Neurobiology. 73(4):259-273
Clanton, J.A., Hope, K.D., and Gamse, J.T. (2013) Fgf signaling governs cell fate in the zebrafish pineal complex. Development (Cambridge, England). 140(2):323-332
Collery, R.F., Cederlund, M.L., and Kennedy, B.N. (2013) Transgenic zebrafish expressing mutant human RETGC-1 exhibit aberrant cone and rod morphology. Experimental Eye Research. 108:120-128
Daly, C.M., Willer, J., Gregg, R., and Gross, J.M. (2013) snow white, a Zebrafish Model of Hermansky-Pudlak Syndrome Type 5. Genetics. 195(2):481-494
Fang, W., Bonaffini, S., Zou, J., Wang, X., Zhang, C., Tsujimura, T., Kawamura, S., and Wei, X. (2013) Characterization of transgenic zebrafish lines that express GFP in the retina, pineal gland, olfactory bulb, hatching gland, and optic tectum. Gene expression patterns : GEP. 13(5-6):150-9
Forbes-Osborne, M.A., Wilson, S.G., and Morris, A.C. (2013) Insulinoma-associated 1a (Insm1a) is required for photoreceptor differentiation in the zebrafish retina. Developmental Biology. 380(2):157-171
Fraser, B., Duval, M.G., Wang, H., and Allison, W.T. (2013) Regeneration of cone photoreceptors when cell ablation is primarily restricted to a particular cone subtype. PLoS One. 8(1):e55410
Gutiérrez, H.C., Santos-Ledo, A., Arranz, A.V., Pradas, J.M., Noguera, J.A., and Arévalo, R.A. (2013) Effects of retinoic acid exposure during zebrafish retinogenesis. Neurotoxicology and teratology. 40:35-45
Janssens, E., Gaublomme, D., De Groef, L., Darras, V.M., Arckens, L., Delorme, N., Claes, F., Van Hove, I., and Moons, L. (2013) Matrix metalloproteinase 14 in the zebrafish: an eye on retinal and retinotectal development. PLoS One. 8(1):e52915
Jurisch-Yaksi, N., Rose, A.J., Lu, H., Raemaekers, T., Munck, S., Baatsen, P., Baert, V., Vermeire, W., Scales, S.J., Verleyen, D., Vandepoel, R., Tylzanowski, P., Yaksi, E., de Ravel, T., Yost, H.J., Froyen, G., Arrington, C.B., and Annaert, W. (2013) Rer1p maintains ciliary length and signaling by regulating γ-secretase activity and Foxj1a levels. The Journal of cell biology. 200(6):709-720
Lenkowski, J.R., Qin, Z., Sifuentes, C.J., Thummel, R., Soto, C.M., Moens, C.B., Raymond, P.A.. (2013) Retinal regeneration in adult zebrafish requires regulation of TGFβ signaling. Glia. 61(10):1687-1697
Nagashima, M., Barthel, L.K., and Raymond, P.A. (2013) A self-renewing division of zebrafish Muller glial cells generates neuronal progenitors that require N-cadherin to regenerate retinal neurons. Development (Cambridge, England). 140(22):4510-4521
Nelson, C.M., Ackerman, K.M., O'Hayer, P., Bailey, T.J., Gorsuch, R.A., and Hyde, D.R. (2013) Tumor Necrosis Factor-Alpha Is Produced by Dying Retinal Neurons and Is Required for Muller Glia Proliferation during Zebrafish Retinal Regeneration. The Journal of neuroscience : the official journal of the Society for Neuroscience. 33(15):6524-6539
Nishiwaki, Y., Yoshizawa, A., Kojima, Y., Oguri, E., Nakamura, S., Suzuki, S., Yuasa-Kawada, J., Kinoshita-Kawada, M., Mochizuki, T., and Masai, I. (2013) The BH3-Only SNARE BNip1 Mediates Photoreceptor Apoptosis in Response to Vesicular Fusion Defects. Developmental Cell. 25(4):374-387
Ramsey, M., and Perkins, B.D. (2013) Basal bodies exhibit polarized positioning in zebrafish cone photoreceptors. The Journal of comparative neurology. 521(8):1803-1816
Saade, C.J., Alvarez-Delfin, K., and Fadool, J.M. (2013) Rod photoreceptors protect from cone degeneration-induced retinal remodeling and restore visual responses in zebrafish. The Journal of neuroscience : the official journal of the Society for Neuroscience. 33(5):1804-1814
Schmidt, K., Cavodeassi, F., Feng, Y., and Stephens, D.J. (2013) Early stages of retinal development depend on Sec13 function. Biology Open. 2(3):256-266
Suzuki, S.C., Bleckert, A., Williams, P.R., Takechi, M., Kawamura, S., and Wong, R.O. (2013) Cone photoreceptor types in zebrafish are generated by symmetric terminal divisions of dedicated precursors. Proceedings of the National Academy of Sciences of the United States of America. 110(37):15109-14
Tappeiner, C., Balmer, J., Iglicki, M., Schuerch, K., Jazwinska, A., Enzmann, V., and Tschopp, M. (2013) Characteristics of Rod Regeneration in a Novel Zebrafish Retinal Degeneration Model Using N-Methyl-N-Nitrosourea (MNU). PLoS One. 8(8):e71064
Thomas, J.L., and Thummel, R. (2013) A novel light damage paradigm for use in retinal regeneration studies in adult zebrafish. Journal of visualized experiments : JoVE. (80):e51017
Vaithianathan, T., Zanazzi, G., Henry, D., Akmentin, W., and Matthews, G. (2013) Stabilization of spontaneous neurotransmitter release at ribbon synapses by ribbon-specific subtypes of complexin. The Journal of neuroscience : the official journal of the Society for Neuroscience. 33(19):8216-8226
Weber, A., Hochmann, S., Cimalla, P., Gärtner, M., Kuscha, V., Hans, S., Geffarth, M., Kaslin, J., Koch, E., and Brand, M. (2013) Characterization of light lesion paradigms and optical coherence tomography as tools to study adult retina regeneration in zebrafish. PLoS One. 8(11):e80483
Zhang, L., Cho, J., Ptak, D., and Leung, Y.F. (2013) The Role of egr1 in Early Zebrafish Retinogenesis. PLoS One. 8(2):e56108
Bader, J.R., Kusik, B.W., and Besharse, J.C. (2012) Analysis of KIF17 distal tip trafficking in zebrafish cone photoreceptors. Vision Research. 75:37-43
Clendenon, S.G., Sarmah, S., Shah, B., Liu, Q., and Marrs, J.A. (2012) Zebrafish cadherin-11 participates in retinal differentiation and retinotectal axon projection during visual system development. Developmental Dynamics : an official publication of the American Association of Anatomists. 241(3):442-454
Hochmann, S., Kaslin, J., Hans, S., Weber, A., Machate, A., Geffarth, M., Funk, R.H., and Brand, M. (2012) Fgf Signaling is Required for Photoreceptor Maintenance in the Adult Zebrafish Retina. PLoS One. 7(1):e30365
Huang, T., Cui, J., Li, L., Hitchcock, P.F., and Li, Y. (2012) The role of microglia in the neurogenesis of zebrafish retina. Biochemical and Biophysical Research Communications. 421(2):214-220
Lane, B.M., and Lister, J.A. (2012) Otx but not mitf transcription factors are required for zebrafish retinal pigment epithelium development. PLoS One. 7(11):e49357
Li, X., Montgomery, J., Cheng, W., Noh, J.H., Hyde, D.R., and Li, L. (2012) Pineal photoreceptor cells are required for maintaining the circadian rhythms of behavioral visual sensitivity in zebrafish. PLoS One. 7(7):e40508
Li, Z., Ptak, D., Zhang, L., Walls, E.K., Zhong, W., and Leung, Y.F. (2012) Phenylthiourea specifically reduces zebrafish eye size. PLoS One. 7(6):e40132
Luo, J., Uribe, R.A., Hayton, S., Calinescu, A.A., Gross, J.M., and Hitchcock, P.F. (2012) Midkine-A functions upstream of Id2a to regulate cell cycle kinetics in the developing vertebrate retina. Neural Development. 7(1):33
Meyers, J.R., Hu, L., Moses, A., Kaboli, K., Papandrea, A., and Raymond, P.A. (2012) beta-catenin/Wnt signaling controls progenitor fate in the developing and regenerating zebrafish retina. Neural Development. 7(1):30
Nakao, T., Tsujikawa, M., Notomi, S., Ikeda, Y., and Nishida, K. (2012) The role of mislocalized phototransduction in photoreceptor cell death of retinitis pigmentosa. PLoS One. 7(4):e32472
Patten, S.A., Jacobs-McDaniels, N.L., Zaouter, C., Drapeau, P., Albertson, R.C., and Moldovan, F. (2012) Role of Chd7 in Zebrafish: A Model for CHARGE Syndrome. PLoS One. 7(2):e31650
Saito, R., Nakauchi, H., and Watanabe, S. (2012) Serine/threonine kinase, Melk, regulates proliferation and glial differentiation of retinal progenitor cells. Cancer science. 103(1):42-9
Stiebel-Kalish, H., Reich, E., Rainy, N., Vatine, G., Nisgav, Y., Tovar, A., Gothilf, Y., and Bach, M. (2012) Gucy2f zebrafish knockdown – a model for Gucy2d-related leber congenital amaurosis. European journal of human genetics : EJHG. 20(8):884-889
Thomas, J.L., Nelson, C.M., Luo, X., Hyde, D.R., and Thummel, R. (2012) Characterization of multiple light damage paradigms reveals regional differences in photoreceptor loss. Experimental Eye Research. 97(1):105-116
Thomas, J.L., Ochocinska, M.J., Hitchcock, P.F., and Thummel, R. (2012) Using the Tg(nrd:egfp)/albino Zebrafish Line to Characterize In Vivo Expression of neurod. PLoS One. 7(1):e29128
Uribe, R.A., Kwon, T., Marcotte, E.M., and Gross, J.M. (2012) Id2a functions to limit Notch pathway activity and thereby influence the transition from proliferation to differentiation of retinoblasts during zebrafish retinogenesis. Developmental Biology. 371(2):280-292
Wan, J., Ramachandran, R., and Goldman, D. (2012) HB-EGF Is Necessary and Sufficient for Müller Glia Dedifferentiation and Retina Regeneration. Developmental Cell. 22(2):334-347
Yin, J., Brocher, J., Linder, B., Hirmer, A., Sundaramurthi, H., Fischer, U., and Winkler, C. (2012) The 1D4 antibody labels outer segments of long double cone but not rod photoreceptors in zebrafish. Investigative ophthalmology & visual science. 53(8):4943-4951
Zhang, Y., Yang, Y., Trujillo, C., Zhong, W., and Leung, Y.F. (2012) The Expression of irx7 in the Inner Nuclear Layer of Zebrafish Retina Is Essential for a Proper Retinal Development and Lamination. PLoS One. 7(4):e36145
Zhao, C., Omori, Y., Brodowska, K., Kovach, P., and Malicki, J. (2012) Kinesin-2 family in vertebrate ciliogenesis. Proceedings of the National Academy of Sciences of the United States of America. 109(7):2388-2393
Zou, J., Wang, X., and Wei, X. (2012) Crb Apical Polarity Proteins Maintain Zebrafish Retinal Cone Mosaics via Intercellular Binding of Their Extracellular Domains. Developmental Cell. 22(6):1261-1274
Bachmann-Gagescu, R., Phelps, I.G., Stearns, G., Link, B.A., Brockerhoff, S.E., Moens, C.B., and Doherty, D. (2011) The Ciliopathy Gene cc2d2a controls Zebrafish Photoreceptor Outer Segment Development Through a Role in Rab8-dependent Vesicle Trafficking. Human molecular genetics. 20(20):4041-55
Bibliowicz, J., and Gross, J.M. (2011) Ectopic proliferation contributes to retinal dysplasia in the juvenile zebrafish patched2 mutant eye. Investigative ophthalmology & visual science. 52(12):8868-77
Chakarova, C.F., Khanna, H., Shah, A.Z., Patil, S.B., Sedmak, T., Murga-Zamalloa, C.A., Papaioannou, M.G., Nagel-Wolfrum, K., Lopez, I., Munro, P., Cheetham, M., Koenekoop, R.K., Rios, R.M., Matter, K., Wolfrum, U., Swaroop, A., and Bhattacharya, S.S. (2011) TOPORS, Implicated in Retinal Degeneration, is a Cilia-Centrosomal Protein. Human molecular genetics. 20(5):975-987
Fischer, S., Filipek-Gorniok, B., and Ledin, J. (2011) Zebrafish Ext2 is necessary for Fgf and Wnt signaling, but not for Hh signaling. BMC Developmental Biology. 11(1):53
Hunter, P.R., Nikolaou, N., Odermatt, B., Williams, P.R., Drescher, U., and Meyer, M.P. (2011) Localization of cadm2a and cadm3 proteins during development of the zebrafish nervous system. The Journal of comparative neurology. 519(11):2252-70
Inoue, D., and Wittbrodt, J. (2011) One for all-a highly efficient and versatile method for fluorescent immunostaining in fish embryos. PLoS One. 6(5):e19713
Jusuf, P.R., Almeida, A.D., Randlett, O., Joubin, K., Poggi, L., and Harris, W.A. (2011) Origin and determination of inhibitory cell lineages in the vertebrate retina. The Journal of neuroscience : the official journal of the Society for Neuroscience. 31(7):2549-2562
Kashyap, B., Frey, R.A., and Stenkamp, D.L. (2011) Ethanol-Induced Microphthalmia is Not Mediated by Changes in Retinoic Acid or Sonic Hedgehog Signaling During Retinal Neurogenesis. Alcoholism, clinical and experimental research. 35(9):1644-61
Klaassen, L.J., Sun, Z., Steijaert, M.N., Bolte, P., Fahrenfort, I., Sjoerdsma, T., Klooster, J., Claassen, Y., Shields, C.R., Ten Eikelder, H.M., Janssen-Bienhold, U., Zoidl, G., McMahon, D.G., and Kamermans, M. (2011) Synaptic transmission from horizontal cells to cones is impaired by loss of connexin hemichannels. PLoS Biology. 9(7):e1001107
Linder, B., Dill, H., Hirmer, A., Brocher, J., Lee, G.P., Mathavan, S., Bolz, H.J., Winkler, C., Laggerbauer, B., and Fischer, U. (2011) Systemic splicing factor deficiency causes tissue-specific defects: A zebrafish model for Retinitis pigmentosa. Human molecular genetics. 20(2):368-377
Morrissey, M.E., Shelton, S., Brockerhoff, S.E., Hurley, J.B., and Kennedy, B.N. (2011) PRE-1, a cis element sufficient to enhance cone- and rod- specific expression in differentiating zebrafish photoreceptors. BMC Developmental Biology. 11:3
Murga-Zamalloa, C.A., Ghosh, A.K., Patil, S.B., Reed, N.A., Chan, L.S., Davuluri, S., Peranen, J., Hurd, T.W., Rachel, R.A., and Khanna, H. (2011) Accumulation of RAF-1 kinase inhibitory protein (RKIP) is associated with CEP290-mediated photoreceptor degeneration in ciliopathies. The Journal of biological chemistry. 286(32):28276-86
Murphy, T.R., Vihtelic, T.S., Ile, K.E., Watson, C.T., Willer, G.B., Gregg, R.G., Bankaitis, V.A., and Hyde, D.R. (2011) Phosphatidylinositol synthase is required for lens structural integrity and photoreceptor cell survival in the zebrafish eye. Experimental Eye Research. 93(4):460-74
Paridaen, J.T., Janson, E., Utami, K.H., Pereboom, T.C., Essers, P.B., van Rooijen, C., Zivkovic, D., and Macinnes, A.W. (2011) The nucleolar GTP-binding proteins Gnl2 and nucleostemin are required for retinal neurogenesis in developing zebrafish. Developmental Biology. 355(2):286-301
Patil, S.B., Hurd, T.W., Ghosh, A.K., Murga-Zamalloa, C.A., and Khanna, H. (2011) Functional Analysis of Retinitis Pigmentosa 2 (RP2) Protein Reveals Variable Pathogenic Potential of Disease-Associated Missense Variants. PLoS One. 6(6):e21379
Phillips, J.B., Blanco-Sanchez, B., Lentz, J.J., Tallafuss, A., Khanobdee, K., Sampath, S., Jacobs, Z.G., Han, P.F., Mishra, M., Williams, D.S., Keats, B.J., Washbourne, P., and Westerfield, M. (2011) Harmonin (Ush1c) is required in zebrafish Muller glial cells for photoreceptor synaptic development and function. Disease models & mechanisms. 4(6):786-800
Qin, Z., Kidd, A.R., Thomas, J.L., Poss, K.D., Hyde, D.R., Raymond, P.A., and Thummel, R. (2011) FGF signaling regulates rod photoreceptor cell maintenance and regeneration in zebrafish. Experimental Eye Research. 93(5):726-34
Quillien, A., Blanco-Sanchez, B., Halluin, C., Moore, J.C., Lawson, N.D., Blader, P., and Cau, E. (2011) BMP signaling orchestrates photoreceptor specification in the zebrafish pineal gland in collaboration with Notch. Development (Cambridge, England). 138(11):2293-2302
Ramachandran, R., Zhao, X.F., and Goldman, D. (2011) Ascl1a/Dkk/ beta -catenin signaling pathway is necessary and glycogen synthase kinase-3 beta inhibition is sufficient for zebrafish retina regeneration. Proceedings of the National Academy of Sciences of the United States of America. 108(38):15858-63
Renninger, S.L., Gesemann, M., and Neuhauss, S.C. (2011) Cone arrestin confers cone vision of high temporal resolution in zebrafish larvae. The European journal of neuroscience. 33(4):658-667
Santos-Ledo, A., Arenzana, F.J., Porteros, A., Lara, J., Velasco, A., Aijón, J., and Arévalo, R. (2011) Cytoarchitectonic and neurochemical differentiation of the visual system in ethanol-induced cyclopic zebrafish larvae. Neurotoxicology and teratology. 33(6):686-97
Sherpa, T., Hunter, S.S., Frey, R.A., Robison, B.D., and Stenkamp, D.L. (2011) Retinal proliferation response in the buphthalmic zebrafish, bugeye. Experimental Eye Research. 93(4):424-36
Shu, X., Zeng, Z., Gautier, P., Lennon, A., Gakovic, M., Cheetham, M.E., Patton, E.E., and Wright, A.F. (2011) Knock-down of the Zebrafish Orthologue of the Retinitis Pigmentosa 2 (RP2) Gene Results in Retinal Degeneration. Investigative ophthalmology & visual science. 52(6):2960-6
Stevens, C.B., Cameron, D.A., and Stenkamp, D.L. (2011) Plasticity of photoreceptor-generating retinal progenitors revealed by prolonged retinoic acid exposure. BMC Developmental Biology. 11(1):51
Thomas, J.L., Vihtelic, T.S., Dendekker, A.D., Willer, G., Luo, X., Murphy, T.R., Gregg, R.G., Hyde, D.R., and Thummel, R. (2011) The loss of vacuolar protein sorting 11 (vps11) causes retinal pathogenesis in a vertebrate model of syndromic albinism. Investigative ophthalmology & visual science. 52(6):3119-28
Tittle, R.K., Sze, R., Ng, A., Nuckels, R.J., Swartz, M.E., Anderson, R.M., Bosch, J., Stainier, D.Y., Eberhart, J.K., and Gross, J.M. (2011) Uhrf1 and Dnmt1 are required for development and maintenance of the zebrafish lens. Developmental Biology. 350(1):50-63
Alvarez, Y., Chen, K., Reynolds, A.L., Waghorne, N., O'Connor, J.J., and Kennedy, B.N. (2010) Predominant cone photoreceptor dysfunction in a hyperglycaemic model of non-proliferative diabetic retinopathy. Disease models & mechanisms. 3(3-4):236-245
Cerveny, K.L., Cavodeassi, F., Turner, K.J., de Jong-Curtain, T.A., Heath, J.K., and Wilson, S.W. (2010) The zebrafish flotte lotte mutant reveals that the local retinal environment promotes the differentiation of proliferating precursors emerging from their stem cell niche. Development (Cambridge, England). 137(13):2107-2115
Chao, R., Nevin, L., Agarwal, P., Riemer, J., Bai, X., Delaney, A., Akana, M., JimenezLopez, N., Bardakjian, T., Schneider, A., Chassaing, N., Schorderet, D.F., FitzPatrick, D., Kwok, P.Y., Ellgaard, L., Gould, D.B., Zhang, Y., Malicki, J., Baier, H., and Slavotinek, A. (2010) A male with unilateral microphthalmia reveals a role for TMX3 in eye development. PLoS One. 5(5):e10565
Choy, S.W., Cheng, C.W., Lee, S.T., Li, V.W., Hui, M.N., Hui, C.C., Liu, D., and Cheng, S.H. (2010) A cascade of irx1a and irx2a controls shh expression during retinogenesis. Developmental Dynamics : an official publication of the American Association of Anatomists. 239(12):3204-3214
Craig, S.E., Thummel, R., Ahmed, H., Vasta, G.R., Hyde, D., and Hitchcock, P.F. (2010) The Zebrafish Galectin Drgal1-L2 Is Expressed by Proliferating Müller Glia and Photoreceptor Progenitors and Regulates the Regeneration of Rod Photoreceptors. Investigative ophthalmology & visual science. 51(6):3244-3252
den Hollander, A.I., Biyanwila, J., Kovach, P., Bardakjian, T., Traboulsi, E., Ragge, N.K., Schneider, A., and Malicki, J. (2010) Genetic defects of GDF6 in the zebrafish out of sight mutant and in human eye developmental anomalies. BMC Genetics. 11:102
Gonzalez-Nunez, V., Nocco, V., and Budd, A. (2010) Characterization of drCol 15a1b: A Novel Component of the Stem Cell Niche in the Zebrafish Retina. Stem cells (Dayton, Ohio). 28(8):1399-1411
Haug, M.F., Biehlmaier, O., Mueller, K.P., and Neuhauss, S.C. (2010) Visual acuity in larval zebrafish: behavior and histology. Frontiers in Zoology. 7:8
Hudak, L.M., Lunt, S., Chang, C.H., Winkler, E., Flammer, H., Lindsey, M., and Perkins, B. (2010) The Intraflagellar Transport Protein Ift80 is essential for Photoreceptor Survival in a Zebrafish Model of Jeune Asphyxiating Thoracic Dystrophy. Investigative ophthalmology & visual science. 51(7):3792-3799
Ile, K.E., Kassen, S., Cao, C., Vihtehlic, T., Shah, S.D., Mousley, C.J., Alb, J.G. Jr, Huijbregts, R.P., Stearns, G.W., Brockerhoff, S.E., Hyde, D.R., and Bankaitis, V.A. (2010) Zebrafish Class 1 Phosphatidylinositol Transfer Proteins: PITPbeta and Double Cone Cell Outer Segment Integrity in Retina. Traffic (Copenhagen, Denmark). 11(9):1151-1167
Insinna, C., Baye, L.M., Amsterdam, A., Besharse, J.C., and Link, B.A. (2010) Analysis of a zebrafish dync1h1 mutant reveals multiple functions for cytoplasmic dynein 1 during retinal photoreceptor development. Neural Development. 5:12
Li, L., Nakaya, N., Chavali, V.R., Ma, Z., Jiao, X., Sieving, P.A., Riazuddin, S., Tomarev, S.I., Ayyagari, R., Riazuddin, S.A., and Hejtmancik, J.F. (2010) A Mutation in ZNF513, a Putative Regulator of Photoreceptor Development, Causes Autosomal-Recessive Retinitis Pigmentosa. American journal of human genetics. 87(3):400-409
Prykhozhij, S.V. (2010) In the Absence of Sonic Hedgehog, p53 Induces Apoptosis and Inhibits Retinal Cell Proliferation, Cell-Cycle Exit and Differentiation in Zebrafish. PLoS One. 5(10):e13549
Ramachandran, R., Reifler, A., Parent, J.M., and Goldman, D. (2010) Conditional gene expression and lineage tracing of tuba1a expressing cells during zebrafish development and retina regeneration. The Journal of comparative neurology. 518(20):4196-4212
Seth, A., Machingo, Q.J., Fritz, A., and Shur, B.D. (2010) Core fucosylation is required for midline patterning during zebrafish development. Developmental Dynamics : an official publication of the American Association of Anatomists. 239(12):3380-3390
Shu, X., Zeng, Z., Gautier, P., Lennon, A., Gakovic, M., Patton, E., and Wright, A. (2010) Zebrafish Rpgr is required for normal retinal development and plays a role in dynein-based retrograde transport processes. Human molecular genetics. 19(4):657-670
Uribe, R.A., and Gross, J.M. (2010) Id2a influences neuron and glia formation in the zebrafish retina by modulating retinoblast cell cycle kinetics. Development (Cambridge, England). 137(22):3763-3774
Wong, L., Weadick, C.J., Kuo, C., Chang, B.S., and Tropepe, V. (2010) Duplicate dmbx1 genes regulate progenitor cell cycle and differentiation during zebrafish midbrain and retinal development. BMC Developmental Biology. 10:100
Zanazzi, G., and Matthews, G. (2010) Enrichment and differential targeting of complexins 3 and 4 in ribbon-containing sensory neurons during zebrafish development. Neural Development. 5:24
Zou, J., Yang, X., and Wei, X. (2010) Restricted localization of ponli, a novel zebrafish MAGUK-family protein, to the inner segment interface areas between green, red, and blue cones. Investigative ophthalmology & visual science. 51(3):1738-1746
Alvarez-Delfin, K., Morris, A.C., Snelson, C.D., Gamse, J.T., Gupta, T., Marlow, F.L., Mullins, M.C., Burgess, H.A., Granato, M., and Fadool, J.M. (2009) Tbx2b is required for ultraviolet photoreceptor cell specification during zebrafish retinal development. Proceedings of the National Academy of Sciences of the United States of America. 106(6):2023-2028
Bai, Q., Wei, X., and Burton, E.A. (2009) Expression of a 12-kb promoter element derived from the zebrafish enolase-2 gene in the zebrafish visual system. Neuroscience letters. 449(3):252-257
Bibliowicz, J., and Gross, J.M. (2009) Expanded progenitor populations, vitreo-retinal abnormalities, and Muller glial reactivity in the zebrafish leprechaun/patched2 retina. BMC Developmental Biology. 9:52
Chow, E.S., Hui, M.N., Cheng, C.W., and Cheng, S.H. (2009) Cadmium affects retinogenesis during zebrafish embryonic development. Toxicology and applied pharmacology. 235(1):68-76
Jing, X., and Malicki, J. (2009) Zebrafish ale oko, an essential determinant of sensory neuron survival and the polarity of retinal radial glia, encodes the p50 subunit of dynactin. Development (Cambridge, England). 136(17):2955-2964
Jusuf, P.R., and Harris, W.A. (2009) Ptf1a is expressed transiently in all types of amacrine cells in the embryonic zebrafish retina. Neural Development. 4:34
Li, H., Chuang, A.Z., and O'Brien, J. (2009) Photoreceptor coupling is controlled by connexin 35 phosphorylation in zebrafish retina. The Journal of neuroscience : the official journal of the Society for Neuroscience. 29(48):15178-15186
Nelson, S.M., Park, L., and Stenkamp, D.L. (2009) Retinal homeobox 1 is required for retinal neurogenesis and photoreceptor differentiation in embryonic zebrafish. Developmental Biology. 328(1):24-39
Ng, A., Uribe, R.A., Yieh, L., Nuckels, R., and Gross, J.M. (2009) Zebrafish mutations in gart and paics identify crucial roles for de novo purine synthesis in vertebrate pigmentation and ocular development. Development (Cambridge, England). 136(15):2601-2611
Nuckels, R.J., Ng, A., Darland, T., and Gross, J.M. (2009) The Vacuolar-ATPase Complex Regulates Retinoblast Proliferation and Survival, Photoreceptor Morphogenesis and Pigmentation in the Zebrafish Eye. Investigative ophthalmology & visual science. 50(2):893-905
Ochocinska, M.J., and Hitchcock, P.F. (2009) NeuroD regulates proliferation of photoreceptor progenitors in the retina of the zebrafish. Mechanisms of Development. 126(3-4):128-141
Qin, Z., Barthel, L.K., and Raymond, P.A. (2009) Genetic evidence for shared mechanisms of epimorphic regeneration in zebrafish. Proceedings of the National Academy of Sciences of the United States of America. 106(23):9310-9315
Seipold, S., Priller, F.C., Goldsmith, P., Harris, W.A., Baier, H., and Abdelilah-Seyfried, S. (2009) Non-SMC condensin I complex proteins control chromosome segregation and survival of proliferating cells in the zebrafish neural retina. BMC Developmental Biology. 9:40
Suhr, S.T., Ramachandran, R., Fuller, C.L., Veldman, M.B., Byrd, C.A., and Goldman, D. (2009) Highly-restricted, cell-specific expression of the simian CMV-IE promoter in transgenic zebrafish with age and after heat shock. Gene expression patterns : GEP. 9(1):54-64
Sukumaran, S., and Perkins, B.D. (2009) Early defects in photoreceptor outer segment morphogenesis in zebrafish ift57, ift88 and ift172 Intraflagellar Transport mutants. Vision Research. 49(4):479-489
Vitorino, M., Jusuf, P.R., Maurus, D., Yukiko, Y., Higashijima, S.I., and Harris, W.A. (2009) Vsx2 in the zebrafish retina: restricted lineages through derepression. Neural Development. 4:14
Cau, E., Quillien, A., and Blader, P. (2008) Notch resolves mixed neural identities in the zebrafish epiphysis. Development (Cambridge, England). 135(14):2391-2401
Collery, R., McLoughlin, S., Vendrell, V., Finnegan, J., Crabb, J.W., Saari, J.C., and Kennedy, B.N. (2008) Duplication and divergence of zebrafish CRALBP genes uncovers novel role for RPE- and Muller-CRALBP in cone vision. Investigative ophthalmology & visual science. 49(9):3812-3820
Del Bene, F., Wehman, A.M., Link, B.A., and Baier, H. (2008) Regulation of neurogenesis by interkinetic nuclear migration through an apical-basal notch gradient. Cell. 134(6):1055-1065
Fleisch, V.C., Schonthaler, H.B., von Lintig, J., and Neuhauss, S.C. (2008) Subfunctionalization of a retinoid-binding protein provides evidence for two parallel visual cycles in the cone-dominant zebrafish retina. The Journal of neuroscience : the official journal of the Society for Neuroscience. 28(33):8208-8216
Lee, J., Willer, J.R., Willer, G.B., Smith, K., Gregg, R.G., and Gross, J.M. (2008) Zebrafish blowout provides genetic evidence for Patched1-mediated negative regulation of Hedgehog signaling within the proximal optic vesicle of the vertebrate eye. Developmental Biology. 319(1):10-22
Liu, Q., Londraville, R., Marrs, J.A., Wilson, A.L., Mbimba, T., Murakami, T., Kubota, F., Zheng, W., and Fatkins, D.G. (2008) Cadherin-6 function in zebrafish retinal development. Developmental Neurobiology. 68(8):1107-1122
Nakaya, N., Lee, H.S., Takada, Y., Tzchori, I., and Tomarev, S.I. (2008) Zebrafish olfactomedin 1 regulates retinal axon elongation in vivo and is a modulator of wnt signaling pathway. The Journal of neuroscience : the official journal of the Society for Neuroscience. 28(31):7900-7910
Nelson, S.M., Frey, R.A., Wardwell, S.L., and Stenkamp, D.L. (2008) The developmental sequence of gene expression within the rod photoreceptor lineage in embryonic zebrafish. Developmental Dynamics : an official publication of the American Association of Anatomists. 237(10):2903-2917
Nishiwaki, Y., Komori, A., Sagara, H., Suzuki, E., Manabe, T., Hosoya, T., Nojima, Y., Wada, H., Tanaka, H., Okamoto, H., and Masai, I. (2008) Mutation of cGMP phosphodiesterase 6alpha'-subunit gene causes progressive degeneration of cone photoreceptors in zebrafish. Mechanisms of Development. 125(11-12):932-946
Snelson, C.D., Burkart, J.T., and Gamse, J.T. (2008) Formation of the asymmetric pineal complex in zebrafish requires two independently acting transcription factors. Developmental Dynamics : an official publication of the American Association of Anatomists. 237(12):3538-3544
Snelson, C.D., Santhakumar, K., Halpern, M.E., and Gamse, J.T. (2008) Tbx2b is required for the development of the parapineal organ. Development (Cambridge, England). 135(9):1693-1702
Stenkamp, D.L., Satterfield, R., Muhunthan, K., Sherpa, T., Vihtelic, T.S., and Cameron, D. (2008) Age-Related Cone Abnormalities in Zebrafish with Genetic Lesions in Sonic Hedgehog. Investigative ophthalmology & visual science. 49(10):4631-4640
Williams, A., Sarkar, S., Cuddon, P., Ttofi, E.K., Saiki, S., Siddiqi, F.H., Jahreiss, L., Fleming, A., Pask, D., Goldsmith, P., O'Kane, C.J., Floto, R.A., and Rubinsztein, D.C. (2008) Novel targets for Huntington's disease in an mTOR-independent autophagy pathway. Nature Chemical Biology. 4(5):295-305
Yamaguchi, M., Fujimori-Tonou, N., Yoshimura, Y., Kishi, T., Okamoto, H., and Masai, I. (2008) Mutation of DNA primase causes extensive apoptosis of retinal neurons through the activation of DNA damage checkpoint and tumor suppressor p53. Development (Cambridge, England). 135(7):1247-1257
Zou, J., Lathrop, K.L., Sun, M., and Wei, X. (2008) Intact retinal pigment epithelium maintained by Nok is essential for retinal epithelial polarity and cellular patterning in zebrafish. The Journal of neuroscience : the official journal of the Society for Neuroscience. 28(50):13684-13695
Fischer, S., Prykhozhij, S., Rau, M.J., and Neumann, C.J. (2007) Mutation of Zebrafish caf-1b Results in S Phase Arrest, Defective Differentiation, and p53-Mediated Apoptosis During Organogenesis. Cell cycle (Georgetown, Tex.). 6(23):2962-2969
Tsujikawa, M., Omori, Y., Biyanwila, J., and Malicki, J. (2007) Mechanism of positioning the cell nucleus in vertebrate photoreceptors. Proceedings of the National Academy of Sciences of the United States of America. 104(37):14819-14824
Fausett, B.V., and Goldman, D. (2006) A role for alpha1 tubulin-expressing Muller glia in regeneration of the injured zebrafish retina. The Journal of neuroscience : the official journal of the Society for Neuroscience. 26(23):6303-6313
Hsu, Y.C., Willoughby, J.J., Christensen, A.K., and Jensen, A.M. (2006) Mosaic Eyes is a novel component of the Crumbs complex and negatively regulates photoreceptor apical size. Development (Cambridge, England). 133(24):4849-4859
Omori, Y., and Malicki, J. (2006) oko meduzy and Related crumbs Genes Are Determinants of Apical Cell Features in the Vertebrate Embryo. Current biology : CB. 16(10):945-957
Avanesov, A., Dahm, R., Sewell, W.F., and Malicki, J.J. (2005) Mutations that affect the survival of selected amacrine cell subpopulations define a new class of genetic defects in the vertebrate retina. Developmental Biology. 285(1):138-155
Babb, S.G., Kotradi, S.M., Shah, B., Chiappini-Williamson, C., Bell, L.N., Schmeiser, G., Chen, E., Liu, Q., and Marrs, J.A. (2005) Zebrafish R-cadherin (Cdh4) controls visual system development and differentiation. Developmental Dynamics : an official publication of the American Association of Anatomists. 233(3):930-945
Poggi, L., Vitorino, M., Masai, I., and Harris, W.A. (2005) Influences on neural lineage and mode of division in the zebrafish retina in vivo. The Journal of cell biology. 171(6):991-999
Shi, X., Bosenko, D.V., Zinkevich, N.S., Foley, S., Hyde, D.R., Semina, E.V., and Vihtelic, T.S. (2005) Zebrafish pitx3 is necessary for normal lens and retinal development. Mechanisms of Development. 122(4):513-527
Yamaguchi, M., Tonou-Fujimori, N., Komori, A., Maeda, R., Nojima, Y., Li, H., Okamoto, H., and Masai, I. (2005) Histone deacetylase 1 regulates retinal neurogenesis in zebrafish by suppressing Wnt and Notch signaling pathways. Development (Cambridge, England). 32(13):3027-3043
Perkins, B.D., Kainz, P.M., O'Malley, D.M., and Dowling, J.E. (2002) Transgenic expression of a GFP-rhodopsin COOH-terminal fusion protein in zebrafish rod photoreceptors. Visual neuroscience. 19(3):257-264
Stenkamp, D.L., Frey, R.A., Mallory, D.E., and Shupe, E.E. (2002) Embryonic retinal gene expression in sonic-you mutant zebrafish. Developmental Dynamics : an official publication of the American Association of Anatomists. 225(3):344-350
Doerre, G. and Malicki, J. (2001) A mutation of early photoreceptor development, mikre oko, reveals cell-cell interactions involved in the survival and differentiation of zebrafish photoreceptors. The Journal of neuroscience : the official journal of the Society for Neuroscience. 21(17):6745-6757
Kay, J.N., Finger-Baier, K.C., Roeser, T., Staub, W., and Baier, H. (2001) Retinal ganglion cell genesis requires lakritz, a zebrafish atonal homolog. Neuron. 30(3):725-736
Vihtelic, T.S., Yamamoto, Y., Sweeney, M.T., Jeffery, W.R., and Hyde, D.R. (2001) Arrested differentiation and epithelial cell degeneration in zebrafish lens mutants. Developmental Dynamics : an official publication of the American Association of Anatomists. 222(4):625-636
Yazulla, S. and Studholme, K.M. (2001) Neurochemical anatomy of the zebrafish retina as determined by immunocytochemistry. Journal of neurocytology. 30(7):551-592
Cameron, D.A. (2000) Cellular proliferation and neurogenesis in the injured retina of adult zebrafish. Visual neuroscience. 17(5):789-797
Link, B.A., Fadool, J.M., Malicki, J., and Dowling, J.E. (2000) The zebrafish young mutation acts non-cell-autonomously to uncouple differentiation from specification for all retinal cells. Development (Cambridge, England). 127(10):2177-2188
Stenkamp, D.L., Frey, R.A., Prabhudesai, S.N., and Raymond, P.A. (2000) Function for hedgehog genes in zebrafish retinal development. Developmental Biology. 220(2):238-252
Vihtelic, T.S. and Hyde, D.R. (2000) Light-induced rod and cone cell death and regeneration in the adult albino zebrafish (Danio rerio) retina. Journal of neurobiology. 44(3):289-307
Vihtelic, T.S., Doro, C.J., and Hyde, D.R. (1999) Cloning and characterization of six zebrafish photoreceptor opsin cDNAs and immunolocalization of their corresponding proteins. Visual neuroscience. 16:571-585
Becker, T.S., Burgess, S.M., Amsterdam, A.H., Allende, M.L., and Hopkins, N. (1998) not really finished is crucial for development of the zebrafish outer retina and encodes a transcription factor highly homologous to human Nuclear Respiratory Factor-1 and avian Initiation Binding Repressor. Development (Cambridge, England). 125:4369-4378
Brockerhoff, S.E., Hurley, J.B., Niemi, G.A., and Dowling, J.E. (1997) A new form of inherited red-blindness identified in zebrafish. The Journal of neuroscience : the official journal of the Society for Neuroscience. 17(11):4236-4242
Fulwiler, C., Schmitt, E.A., Kim, J.M.J., and Dowling, J.E. (1997) Retinal patterning in the zebrafish mutant Cyclops. The Journal of comparative neurology. 381(4):449-460
Macdonald, R. and Wilson, S.W. (1997) Distribution of Pax6 protein during eye development suggests discrete roles in proliferative and differentiated visual cells. Development genes and evolution. 206:363-369
Masai, I., Heisenberg, C.P., Barth, K.A., Macdonald, R., Adamek, S., and Wilson, S.W. (1997) floating head and masterblind regulate neuronal patterning in the roof of the forebrain. Neuron. 18(1):43-57
Heisenberg, C.P., Brand, M., Jiang, Y.J., Warga, R.M., Beuchle, D., van Eeden, F.J., Furutani-Seiki, M., Granato, M., Haffter, P., Hammerschmidt, M., Kane, D.A., Kelsh, R.N., Mullins, M.C., Odenthal, J., and Nüsslein-Volhard, C. (1996) Genes involved in forebrain development in the zebrafish, Danio rerio. Development (Cambridge, England). 123:191-203
Schmitt, E.A. and Dowling, J.E. (1996) Comparison of topographical patterns of ganglion and photoreceptor cell differentiation in the retina of the zebrafish, Danio rerio. The Journal of comparative neurology. 371(2):222-234
Larison, K.D., BreMiller, R., Wells, K.S., Clements, I., and Haugland, R.P. (1995) Use of a new fluorogenic phosphatase substrate in immunohistochemical applications. The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society. 43:77-83
Larison, K.D. and BreMiller, R. (1990) Early onset of phenotype and cell patterning in the embryonic zebrafish retina. Development (Cambridge, England). 109:567-576

Additional Citations (4):
Antibody Annotation (2008) Antibody Data Curated from Older Literature. ZFIN Historical Data.
ZFIN Staff (2008) Antibody information from supplier. Manually curated data.
ZIRC and ZFIN Staff (2008) Antibody Data Submissions. ZFIN Direct Data Submission.
ZFIN Staff (2002) Scientific Curation. Manually curated data.
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.
Please check the highlighted fields and try again.
Thank you for submitting comments. Your input has been emailed to ZFIN curators who may contact you if additional information is required.
Oops. Something went wrong. Please try again later.