FIGURE

Fig. 4

ID
ZDB-FIG-241203-4
Publication
Volkov et al., 2024 - Samd7 represses short-wavelength cone genes to preserve long-wavelength cone and rod photoreceptor identity
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Fig. 4

Red cones are transformed into hybrid red/UV cones in the larval samd7?/? retina. (A?D) Confocal images of 5-dpf WT and samd7?/? eyes show that UV opsin and UV-cone-specific opn1sw1:GFP is up-regulated in samd7?/? red cones (thrb:tdTomato+). (E) UV cones (opn1sw1:GFP+ cells per 1,600 µm2) are increased in the samd7?/? retina. The subset of UV cones that are not derived from red cones (opn1sw1:GFP+;thrb:tdTomato?) are also increased, suggesting that a small subset of supernumerary UV cones in the samd7?/? retina derive from another unknown cell type or precursor (mean ± SD; n = 4 WT, n = 6 samd7?/?). (F) Volcano plot from bulk RNA-seq comparing gene expression in isolated 5-dpf WT thrb:tdTomato+ cells (i.e., red cones) and samd7?/? thrb:tdTomato+ cells (i.e., transformed hybrid red/UV cones). UV-cone genes are up-regulated in samd7?/? hybrid red/UV cones including tbx2a, tbx2b, opn1sw1, arr3b, mir729, tgfa, and grk7b (5). Red-cone-specific changes in gene expression were also observed, including reduced expression of the thyroid-hormone-inactivating enzyme, dio3b; increased expression of the red-shifted red opsin paralog, opn1lw1 (?max = 558 nm); and decreased expression of the blue-shifted red opsin paralog, opn1lw2 (?max = 548 nm). Similar changes in red opsin paralog expression were previously observed in larval zebrafish treated with thyroid hormone (44). Red/green-cone-specific arr3a expression was absent, and exorh and samd7 expression were increased in samd7?/? hybrid red/UV cones. (Scale bar, 10 µm.) Statistical comparisons in E were performed using the two-tailed, unpaired t test assuming unequal variance. *P < 0.05 and ***P < 0.0005. SD, standard deviation.

Expression Data
Genes:
Antibody:
Fish:
Anatomical Terms:
Stage: Day 5

Expression Detail
Antibody Labeling
Phenotype Data
Fish:
Observed In:
Stage: Day 5

Phenotype Detail
Acknowledgments
This image is the copyrighted work of the attributed author or publisher, and ZFIN has permission only to display this image to its users. Additional permissions should be obtained from the applicable author or publisher of the image. Full text @ Proc. Natl. Acad. Sci. USA