ZFIN ID: ZDB-GENE-990415-101

Mapping Details

Gene Name:	homeobox B1a
Symbol:	hoxb1a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN JBrowse	3	23,768,898 - 23,771,142	GRCz11
Ensembl	3	23,768,898 - 23,771,142	GRCz11
Vega	3	23,638,350 - 23,640,594	GRCv10
NCBI Map Viewer	3	23,768,905 - 23,770,711	GRCz11
UCSC	3	-	GRCz11

Mapped Clones containing hoxb1a
DKEY-178D9	Chr: 3 Details
BUSM1-254O17	Chr: 3 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Citations
sa1191	3	23,770,481	GRCz11	Busch-Nentwich et al., 2013
	3	23,639,933	GRCz10	Busch-Nentwich et al., 2013
	3	24,061,722	Zv9	Busch-Nentwich et al., 2013
sa31326	3	23,770,389	GRCz11	Busch-Nentwich et al., 2013
	3	23,639,841	GRCz10	Busch-Nentwich et al., 2013
	3	24,061,630	Zv9	Busch-Nentwich et al., 2013
sa33162	3	23,768,949	GRCz11	Busch-Nentwich et al., 2013
	3	23,638,401	GRCz10	Busch-Nentwich et al., 2013
	3	24,060,190	Zv9	Busch-Nentwich et al., 2013
um189	3	23,768,985	GRCz11	Weicksel et al., 2014
um190	3	23,768,982 - 23,768,983	GRCz11	Weicksel et al., 2014
um191	3	23,768,983 - 23,768,988	GRCz11	Weicksel et al., 2014
um192	3	23,768,983 - 23,768,998	GRCz11	Weicksel et al., 2014
um193	3	23,768,979 - 23,768,986	GRCz11	Weicksel et al., 2014
um194	3	23,768,984 - 23,768,988	GRCz11	Weicksel et al., 2014

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
3	2211.0 cR	hoxb1a	Goodfellow T51 (T51)	Geisler, Robert	Data
3	44.1 cM	hoxb1a	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
hoxb2a	GENE	3		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
hoxb3a	GENE	3		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
hoxb4a	GENE	3		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
hoxb6a	GENE	3		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
hoxb8a	GENE	3		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
hoxb9a	GENE	3		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
eve1	GENE	3		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
hoxb5a	GENE	3		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
hoxb10a	GENE	3		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
hoxb7a	GENE	3		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.

Chr 3

Amores et al., 1998

Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, ...