Gene

hoxb1a

ID
ZDB-GENE-990415-101
Name
homeobox B1a
Symbol
hoxb1a Nomenclature History
Previous Names
  • hoxb1
  • etID309950.3 (1)
  • id:ibd3532
  • sb:eu402
  • Z-3
Type
protein_coding_gene
Location
Chr: 3 Mapping Details/Browsers
Description
Exhibits sequence-specific DNA binding activity. Involved in central nervous system development. Predicted to localize to nucleus. Is expressed in several structures, including hindbrain; mesoderm; neural keel; neural plate; and neural rod. Orthologous to human HOXB1 (homeobox B1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
97 figures from 64 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
15 figures from 5 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With hoxb1a Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Facial paresis, hereditary congenital, 3 614744
Associated With hoxb1a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017970 Homeobox, conserved site
Domain IPR001356 Homeodomain
Domain IPR020479 Homeodomain, metazoa
Family IPR046327 Homeobox protein Hox-A1/B1/D1
Homologous_superfamily IPR009057 Homedomain-like superfamily
Domain Details Per Protein
Protein Length Homedomain-like superfamily Homeobox, conserved site Homeobox protein Hox-A1/B1/D1 Homeodomain Homeodomain, metazoa
UniProtKB:B3DHZ4 316
UniProtKB:O42366 311
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA hoxb1a-201 (1) Ensembl 1,507 nt
mRNA ottdart00000001810 (1) Havana 1,860 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations