Gene
hoxb3a
- ID
- ZDB-GENE-990415-104
- Name
- homeobox B3a
- Symbol
- hoxb3a Nomenclature History
- Previous Names
-
- hoxb3
- id:ibd3053 (1)
- wu:fc33f11
- Z-92
- zgc:111819
- Type
- protein_coding_gene
- Location
- Chr: 3 Mapping Details/Browsers
- Description
- Predicted to have DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in anterior/posterior pattern specification; embryonic skeletal system morphogenesis; and positive regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Is expressed in several structures, including ectoderm; hindbrain neural keel; nervous system; neural crest; and pharyngeal arch. Orthologous to human HOXB3 (homeobox B3).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 39 figures from 29 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR001827 | Homeobox protein, antennapedia type, conserved site |
| Conserved_site | IPR017970 | Homeobox, conserved site |
| Domain | IPR001356 | Homeodomain |
| Domain | IPR020479 | Homeodomain, metazoa |
| Domain | IPR025281 | Domain of unknown function DUF4074 |
| Homologous_superfamily | IPR009057 | Homedomain-like superfamily |
Domain Details Per Protein
| Protein | Length | Domain of unknown function DUF4074 | Homedomain-like superfamily | Homeobox, conserved site | Homeobox protein, antennapedia type, conserved site | Homeodomain | Homeodomain, metazoa |
|---|---|---|---|---|---|---|---|
|
UniProtKB:O42368
|
417 | ||||||
|
UniProtKB:A0A8M9P483
|
417 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
hoxb3a-201
(1)
|
Ensembl | 3,411 nt | ||
| mRNA |
hoxb3a-202
(1)
|
Ensembl | 593 nt | ||
| mRNA |
hoxb3a-203
(1)
|
Ensembl | 539 nt | ||
| mRNA |
hoxb3a-204
(1)
|
Ensembl | 1,764 nt | ||
| mRNA |
hoxb3a-205
(1)
|
Ensembl | 3,483 nt | ||
| mRNA |
hoxb3a-206
(1)
|
Ensembl | 3,785 nt | ||
| mRNA |
hoxb3a-207
(1)
|
Ensembl | 3,681 nt | ||
| mRNA |
hoxb3a-208
(1)
|
Ensembl | 3,133 nt | ||
| mRNA | ottdart00000001814 (1) | Havana | 2,771 nt |
Interactions and Pathways
No data available
Plasmids