ZFIN ID: ZDB-GENE-990415-119

Mapping Details

Gene Name:	homeobox D13a
Symbol:	hoxd13a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN JBrowse	9	1,986,816 - 1,990,323	GRCz11
Ensembl	9	1,986,816 - 1,990,323	GRCz11
Vega	9	1,986,019 - 1,989,526	GRCv10
NCBI Map Viewer	9	1,987,370 - 1,990,311	GRCz11
UCSC	9	-	GRCz11

Mapped Clones containing hoxd13a
RP71-78H1	Chr: 9 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Citations
sa9140	9	1,989,702	GRCz11	Busch-Nentwich et al., 2013
	9	1,988,905	GRCz10	Busch-Nentwich et al., 2013
	9	1,980,501	Zv9	Busch-Nentwich et al., 2013
w244	9	1,989,955 - 1,989,956	GRCz11	Ye et al., 2020
w245	9	1,989,956 - 1,989,957	GRCz11	Zebrafish Nomenclature Committee
	9	1,989,956 - 1,989,957	GRCz11	Ye et al., 2020
w246	9	1,989,952 - 1,989,961	GRCz11	Ye et al., 2020

GENETIC MAPPING PANELS: No data available

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
hoxd3a	GENE	9		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report evx2, hoxd13a, hoxd12a, hoxd11a, hoxd10a, hoxd9a, hoxd4a, and hoxd3a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG09.
hoxd9a	GENE	9		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report evx2, hoxd13a, hoxd12a, hoxd11a, hoxd10a, hoxd9a, hoxd4a, and hoxd3a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG09.
hoxd10a	GENE	9		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report evx2, hoxd13a, hoxd12a, hoxd11a, hoxd10a, hoxd9a, hoxd4a, and hoxd3a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG09.
evx2	GENE	9		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report evx2, hoxd13a, hoxd12a, hoxd11a, hoxd10a, hoxd9a, hoxd4a, and hoxd3a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG09.
hoxd12a	GENE	9		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report evx2, hoxd13a, hoxd12a, hoxd11a, hoxd10a, hoxd9a, hoxd4a, and hoxd3a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG09.
hoxd11a	GENE	9		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report evx2, hoxd13a, hoxd12a, hoxd11a, hoxd10a, hoxd9a, hoxd4a, and hoxd3a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG09.
hoxd4a	GENE	9		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report evx2, hoxd13a, hoxd12a, hoxd11a, hoxd10a, hoxd9a, hoxd4a, and hoxd3a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG09.

Chr 9

Amores et al., 1998

Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report evx2, ...

Genomic Feature sa9140 is an allele of hoxd13a