ZFIN ID: ZDB-GENE-990415-101

Mapping Details

Gene Name: homeobox B1a
Symbol: hoxb1a
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN JBrowse 3 23,768,898 - 23,771,142 GRCz11
Ensembl 3 23,768,898 - 23,771,142 GRCz11
Vega 3 23,638,350 - 23,640,594 GRCv10
NCBI Map Viewer 3 23,768,905 - 23,770,711 GRCz11
UCSC 3 - GRCz11
Mapped Clones containing hoxb1a
DKEY-178D9 Chr: 3 Details
BUSM1-254O17 Chr: 3 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
sa1191 3 23,770,481 GRCz11 Busch-Nentwich et al., 2013
3 23,639,933 GRCz10 Busch-Nentwich et al., 2013
3 24,061,722 Zv9 Busch-Nentwich et al., 2013
sa31326 3 23,770,389 GRCz11 Busch-Nentwich et al., 2013
3 23,639,841 GRCz10 Busch-Nentwich et al., 2013
3 24,061,630 Zv9 Busch-Nentwich et al., 2013
sa33162 3 23,768,949 GRCz11 Busch-Nentwich et al., 2013
3 23,638,401 GRCz10 Busch-Nentwich et al., 2013
3 24,060,190 Zv9 Busch-Nentwich et al., 2013
um189 3 23,768,985 GRCz11 Weicksel et al., 2014
um190 3 23,768,982 - 23,768,983 GRCz11 Weicksel et al., 2014
um191 3 23,768,983 - 23,768,988 GRCz11 Weicksel et al., 2014
um192 3 23,768,983 - 23,768,998 GRCz11 Weicksel et al., 2014
um193 3 23,768,979 - 23,768,986 GRCz11 Weicksel et al., 2014
um194 3 23,768,984 - 23,768,988 GRCz11 Weicksel et al., 2014

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
3 2211.0 cR hoxb1a Goodfellow T51 (T51) Geisler, Robert Data
3 44.1 cM hoxb1a Heat Shock (HS) Woods, Ian G. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
hoxb2a GENE 3 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
hoxb3a GENE 3 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
hoxb4a GENE 3 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
hoxb6a GENE 3 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
hoxb8a GENE 3 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
hoxb9a GENE 3 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
eve1 GENE 3 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
hoxb5a GENE 3 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
hoxb10a GENE 3 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
hoxb7a GENE 3 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.

OTHER MAPPING INFORMATION
Chr 3 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1,  ...
Genomic Feature um191 is an allele of hoxb1a
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