ZFIN ID: ZDB-GENE-980526-196

ZFIN ID: ZDB-GENE-980526-196

Mapping Details

Gene Name:	patched 1
Symbol:	ptch1

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN JBrowse	8	29,986,265 - 30,066,179	GRCz11
Ensembl	8	29,986,265 - 30,066,179	GRCz11
Vega	8	29,977,033 - 30,056,947	GRCv10
Vega	8	29,953,792 - 29,957,053	GRCv10
NCBI Map Viewer	8	29,962,635 - 30,068,277	GRCz11
UCSC	8	-	GRCz11

Mapped Clones containing ptch1
CH211-248D20	Chr: 8 Details
DKEY-72L19	Chr: 8 Details
DKEY-185L9	Chr: 8 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Citations
sa784	8	30,063,297	GRCz11	Busch-Nentwich et al., 2013
	8	30,054,065	GRCz10	Busch-Nentwich et al., 2013
	8	30,911,339	Zv9	Busch-Nentwich et al., 2013
sa7141	8	29,986,723	GRCz11	Busch-Nentwich et al., 2013
	8	29,977,491	GRCz10	Busch-Nentwich et al., 2013
	8	30,834,765	Zv9	Busch-Nentwich et al., 2013
sa9464	8	30,022,270	GRCz11	Busch-Nentwich et al., 2013
	8	30,013,038	GRCz10	Busch-Nentwich et al., 2013
	8	30,870,312	Zv9	Busch-Nentwich et al., 2013
sa17883	8	30,016,957	GRCz11	Busch-Nentwich et al., 2013
	8	30,007,725	GRCz10	Busch-Nentwich et al., 2013
	8	30,864,999	Zv9	Busch-Nentwich et al., 2013
sa21322	8	30,021,871	GRCz11	Busch-Nentwich et al., 2013
	8	30,012,639	GRCz10	Busch-Nentwich et al., 2013
	8	30,869,913	Zv9	Busch-Nentwich et al., 2013
sa21323	8	30,047,543	GRCz11	Busch-Nentwich et al., 2013
	8	30,038,311	GRCz10	Busch-Nentwich et al., 2013
	8	30,895,585	Zv9	Busch-Nentwich et al., 2013
sa34430	8	30,066,025	GRCz11	Busch-Nentwich et al., 2013
	8	30,056,793	GRCz10	Busch-Nentwich et al., 2013
	8	30,914,067	Zv9	Busch-Nentwich et al., 2013
tj222	8	30,016,921	GRCz11	ZFIN Curated Data
la016340Tg	8	30,818,461 - 30,818,471	Zv9

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
8	80.1 cM	ptc2	Mother of Pearl (MOP)	Postlethwait, John H.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
aopep	GENE	8		Titus et al., 2006	Titus et al (Gene 371, 211-223) mapped the fancc gene to LG8 using the HS ...
fancc	GENE	8		Titus et al., 2006	Titus et al (Gene 371, 211-223) mapped the fancc gene to LG8 using the HS ...

Chr 8

Titus et al (Gene 371, 211-223) mapped the fancc gene to LG8 using the HS mapping panel. BLAST ...

Genomic Feature tj222 is an allele of ptch1

Marker	Type	Chr	Distance	Publication / Person	Comments
z11948	SSLP	8		Koudijs et al., 2005

Genomic Feature tj222 is an allele of ptch1

Chr 8

Genomic Feature la016340Tg is an allele of ptch1