Transcript

tpt1-005

ID

ZDB-TSCRIPT-110325-1134

Name

tpt1-005 Nomenclature History

Previous Names

tctp-005

Transcript Type

ncRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

tpt1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000149038 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000149038.3|gene_biotype:protein_coding|ENSDARG00000092693.4 transcript_biotype:processed_transcript gene_symbol:tpt1 cdna chromosome:GRCz11:1:34708088:34713707:-1
CCGGCCTTTTCAGCTGAGTCCACGATCAGGTCACAGCCAG
CGCTGTTCGCCTTCTGATATCCCCAGACACAATCCAACAA
AATGATCATCTACAAGGACATCATCACTGATGATCACCAG
AGCAGAAGGAGACATTGATGATGCCCTGATTGGTGGCAAT
GCGTCAGCAGAAGTTGCGGATGAGGGCTGTGACAGCACTT
CTGTCAGCGGTGTGGACATAGTCCTCAACCACAAACTTCA
GGAGACCTCCTACGACAAGAAGTCTTACACAGCCTACATC
AAAGACTACATGAAGGCAGTTAAGGCCAAGTTGCAGGAAA
GTGCACCTAATAGGGTAGATCCCTTTATGGCTAACGCACC
GGCTGAGGTCAAGAAAATCCTAGGCAACATCAAAAACTTT
CAGTTTTTCACTGGTGAATCCATGAACCCTGATGGCATGA
TCGGTCTCCTTGACTTTCGTGAGGATGGAGTCACACCATA
CATGATCTTCTTCAAGGATGGTCTTGAGATTGAAAAATGC
TAAACGTCCCACGCTTCTACAAATCACCCCTCAAACTCTG
GCCTCTGCTTGATGGTTTGGCCCGTGGATTAAACCAGTCA
TTCCCCCTCATCCTTTCCATCAGGACCAGAGGCTCTTTTA
ACTTCACGAGGCCACTGTTTTCATTTCTTGATTGGCTTAT
GTCCGTCTACAGCAAGAAGACGCGAACGTTCCCTTCATGA
AATTTAAAAACAGGACTTTTAGCAAGCCAAGCCACAACGC
GCAGAGATTGTGGTCAAGAAACTGAGTCATTTTTGGGGTT
CTATTTTATGTCTTGG

OTTDART00000048328 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000048328|OTTDARG00000029893|ZDB-GENE-990603-10 tpt1|no_translation tctp-005 LG_ CR339054.14 Danio rerio protein_coding KNOWN, 816 bp
CCGGCCTTTTCAGCTGAGTCCACGATCAGGTCACAGCCAG
CGCTGTTCGCCTTCTGATATCCCCAGACACAATCCAACAA
AATGATCATCTACAAGGACATCATCACTGATGATCACCAG
AGCAGAAGGAGACATTGATGATGCCCTGATTGGTGGCAAT
GCGTCAGCAGAAGTTGCGGATGAGGGCTGTGACAGCACTT
CTGTCAGCGGTGTGGACATAGTCCTCAACCACAAACTTCA
GGAGACCTCCTACGACAAGAAGTCTTACACAGCCTACATC
AAAGACTACATGAAGGCAGTTAAGGCCAAGTTGCAGGAAA
GTGCACCTAATAGGGTAGATCCCTTTATGGCTAACGCACC
GGCTGAGGTCAAGAAAATCCTAGGCAACATCAAAAACTTT
CAGTTTTTCACTGGTGAATCCATGAACCCTGATGGCATGA
TCGGTCTCCTTGACTTTCGTGAGGATGGAGTCACACCATA
CATGATCTTCTTCAAGGATGGTCTTGAGATTGAAAAATGC
TAAACGTCCCACGCTTCTACAAATCACCCCTCAAACTCTG
GCCTCTGCTTGATGGTTTGGCCCGTGGATTAAACCAGTCA
TTCCCCCTCATCCTTTCCATCAGGACCAGAGGCTCTTTTA
ACTTCACGAGGCCACTGTTTTCATTTCTTGATTGGCTTAT
GTCCGTCTACAGCAAGAAGACGCGAACGTTCCCTTCATGA
AATTTAAAAACAGGACTTTTAGCAAGCCAAGCCACAACGC
GCAGAGATTGTGGTCAAGAAACTGAGTCATTTTTGGGGTT
CTATTTTATGTCTTGG

Related Transcripts

Transcripts related to tpt1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	tpt1-203 (1) Ensembl	Ensembl	729 nt	Select Tool
mRNA	tpt1-201 (1) Ensembl	Ensembl	1,139 nt	Select Tool
mRNA	tpt1-202 (1) Ensembl	Ensembl	583 nt	Select Tool ZFIN BLAST
mRNA	tpt1-205 (1) Ensembl	Ensembl	776 nt	Select Tool
ncRNA	tpt1-002 (1) Ensembl	Ensembl	877 nt	Select Tool
ncRNA	tpt1-005	Ensembl	816 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations