Transcript

tpt1-203

ID

ZDB-TSCRIPT-090929-21230

Name

tpt1-203 Nomenclature History

Previous Names

tctp-004
tpt1-004

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

tpt1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000138240 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000138240.2|gene_biotype:protein_coding|ENSDARG00000092693.4 transcript_biotype:nonsense_mediated_decay gene_symbol:tpt1 cdna chromosome:GRCz11:1:34708313:34713706:-1
CGGCCTTTTCAGCTGAGTCCACGATCAGGTCACAGCCAGC
GCTGTTCGCCTTCTGATATCCCCAGACACAATCCAACAAA
ATGATCATCTACAAGGACATCATCACTGGGGATGAGATGT
TCTCAGACATCTACAAAATCAAAGAGTCTGAGAATGGAAT
GATGCTTGAAGTGGAGGGAAAGATGATCACCAGAGCAGAA
GGAGACATTGATGATGCCCTGATTGGTGGCAATGCGTCAG
CAGAAGTTGCGGATGAGGGCTGTGACAGCACTTCTGTCAG
CGGTGTGGACATAGTCCTCAACCACAAACTTCAGGAGACC
TCCTACGACAAGAAGTCTTACACAGCCTACATCAAAGACT
ACATGAAGGCTTTCCAGCATGAGAGGCGTCAGGATGTTCA
ATACCTCAGAGGATGAATGGAAAAACCATTTTGCTAGTTA
AGGCCAAGTTGCAGGAAAGTGCACCTAATAGGGTAGATCC
CTTTATGGCTAACGCACCGGCTGAGGTCAAGAAAATCCTA
GGCAACATCAAAAACTTTCAGTTTTTCACTGGTGAATCCA
TGAACCCTGATGGCATGATCGGTCTCCTTGACTTTCGTGA
GGATGGAGTCACACCATACATGATCTTCTTCAAGGATGGT
CTTGAGATTGAAAAATGCTAAACGTCCCACGCTTCTACAA
ATCACCCCTCAAACTCTGGCCTCTGCTTGATGGTTTGGCC
CGTGGATTA

OTTDART00000041153 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000041153|OTTDARG00000029893|ZDB-GENE-990603-10 tpt1|OTTDARP00000032879 tctp-004 LG_ CR339054.14 Danio rerio protein_coding KNOWN, 729 bp
CGGCCTTTTCAGCTGAGTCCACGATCAGGTCACAGCCAGC
GCTGTTCGCCTTCTGATATCCCCAGACACAATCCAACAAA
ATGATCATCTACAAGGACATCATCACTGGGGATGAGATGT
TCTCAGACATCTACAAAATCAAAGAGTCTGAGAATGGAAT
GATGCTTGAAGTGGAGGGAAAGATGATCACCAGAGCAGAA
GGAGACATTGATGATGCCCTGATTGGTGGCAATGCGTCAG
CAGAAGTTGCGGATGAGGGCTGTGACAGCACTTCTGTCAG
CGGTGTGGACATAGTCCTCAACCACAAACTTCAGGAGACC
TCCTACGACAAGAAGTCTTACACAGCCTACATCAAAGACT
ACATGAAGGCTTTCCAGCATGAGAGGCGTCAGGATGTTCA
ATACCTCAGAGGATGAATGGAAAAACCATTTTGCTAGTTA
AGGCCAAGTTGCAGGAAAGTGCACCTAATAGGGTAGATCC
CTTTATGGCTAACGCACCGGCTGAGGTCAAGAAAATCCTA
GGCAACATCAAAAACTTTCAGTTTTTCACTGGTGAATCCA
TGAACCCTGATGGCATGATCGGTCTCCTTGACTTTCGTGA
GGATGGAGTCACACCATACATGATCTTCTTCAAGGATGGT
CTTGAGATTGAAAAATGCTAAACGTCCCACGCTTCTACAA
ATCACCCCTCAAACTCTGGCCTCTGCTTGATGGTTTGGCC
CGTGGATTA

Related Transcripts

Transcripts related to tpt1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	tpt1-203	Ensembl	729 nt
mRNA	tpt1-201 (1) Ensembl	Ensembl	1,139 nt	Select Tool
mRNA	tpt1-202 (1) Ensembl	Ensembl	583 nt	Select Tool ZFIN BLAST
mRNA	tpt1-205 (1) Ensembl	Ensembl	776 nt	Select Tool
ncRNA	tpt1-002 (1) Ensembl	Ensembl	877 nt	Select Tool
ncRNA	tpt1-005 (1) Ensembl	Ensembl	816 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations