Transcript

tpt1-002

ID

ZDB-TSCRIPT-090929-21228

Name

tpt1-002 Nomenclature History

Previous Names

tctp-002

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

tpt1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000140387 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000140387.2|gene_biotype:protein_coding|ENSDARG00000092693.4 transcript_biotype:retained_intron gene_symbol:tpt1 cdna chromosome:GRCz11:1:34711081:34713710:-1
GCGCCGGCCTTTTCAGCTGAGTCCACGATCAGGTCACAGC
CAGCGCTGTTCGCCTTCTGATATCCCCAGACACAATCCAA
CAAAATGATCATCTACAAGGACATCATCACTGGGGATGAG
ATGTTCTCAGACATCTACAAAATCAAAGAGTCTGAGAATG
GAATGATGCTTGAAGTGGAGGGAAAGATGATCACCAGAGC
AGAAGGAGACATTGATGATGCCCTGATTGGTGGCAATGCG
TCAGCAGAAGTTGCGGATGAGGGCTGTGACAGCACTTCTG
TCAGCGGTGTGGACATAGTCCTCAACCACAAACTTCAGGA
GACCTCCTACGACAAGAAGTCTTACACAGCCTACATCAAA
GACTACATGAAGGCGTGAGTATGATGTCAACAGGCATGAA
ATCGCTTGTGAAGAGCATGTTGTACCTTGCAACAGCAGTC
TTGTTTAACAGCAAATATAAAGGCCCCCATGTGCTTGAAG
CAAAAATGGTGTGATGTCATTTCAAATAAATCAGTCAATA
GTGTTATGATATAAAATATTAATATTTTAATAAATCACAT
TTCAGTTTCCAGCATGAGAGGCGTCAGGATGTTCAATACC
TCAGAGGATGAATGGAAAAACCATTTTGCTGTCAGTATAT
TAGGGCCTGTATACTGCTAATATTCCAATCATTTATAATA
AAGCTTTTGCATCATTGACAGCTCAGAGTCTTGTATTGTG
GCCACCTGGGTTTCAATATGTTACGATGCAAAATGAAAGG
TCCCTGCGCTTTCTGCTTGCCCCATGAGTGGCATGTAAGA
TTGAATTTGGGACTACAAATGTTCTTAACTCTACTTTGAT
TTTTCAATTCTATAAAGCCTTGTGGTGTACTCACTTT

OTTDART00000041151 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000041151|OTTDARG00000029893|ZDB-GENE-990603-10 tpt1|no_translation tctp-002 LG_ CR339054.14 Danio rerio protein_coding KNOWN, 877 bp
GCGCCGGCCTTTTCAGCTGAGTCCACGATCAGGTCACAGC
CAGCGCTGTTCGCCTTCTGATATCCCCAGACACAATCCAA
CAAAATGATCATCTACAAGGACATCATCACTGGGGATGAG
ATGTTCTCAGACATCTACAAAATCAAAGAGTCTGAGAATG
GAATGATGCTTGAAGTGGAGGGAAAGATGATCACCAGAGC
AGAAGGAGACATTGATGATGCCCTGATTGGTGGCAATGCG
TCAGCAGAAGTTGCGGATGAGGGCTGTGACAGCACTTCTG
TCAGCGGTGTGGACATAGTCCTCAACCACAAACTTCAGGA
GACCTCCTACGACAAGAAGTCTTACACAGCCTACATCAAA
GACTACATGAAGGCGTGAGTATGATGTCAACAGGCATGAA
ATCGCTTGTGAAGAGCATGTTGTACCTTGCAACAGCAGTC
TTGTTTAACAGCAAATATAAAGGCCCCCATGTGCTTGAAG
CAAAAATGGTGTGATGTCATTTCAAATAAATCAGTCAATA
GTGTTATGATATAAAATATTAATATTTTAATAAATCACAT
TTCAGTTTCCAGCATGAGAGGCGTCAGGATGTTCAATACC
TCAGAGGATGAATGGAAAAACCATTTTGCTGTCAGTATAT
TAGGGCCTGTATACTGCTAATATTCCAATCATTTATAATA
AAGCTTTTGCATCATTGACAGCTCAGAGTCTTGTATTGTG
GCCACCTGGGTTTCAATATGTTACGATGCAAAATGAAAGG
TCCCTGCGCTTTCTGCTTGCCCCATGAGTGGCATGTAAGA
TTGAATTTGGGACTACAAATGTTCTTAACTCTACTTTGAT
TTTTCAATTCTATAAAGCCTTGTGGTGTACTCACTTT

Related Transcripts

Transcripts related to tpt1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	tpt1-203 (1) Ensembl	Ensembl	729 nt	Select Tool
mRNA	tpt1-201 (1) Ensembl	Ensembl	1,139 nt	Select Tool
mRNA	tpt1-202 (1) Ensembl	Ensembl	583 nt	Select Tool ZFIN BLAST
mRNA	tpt1-205 (1) Ensembl	Ensembl	776 nt	Select Tool
ncRNA	tpt1-002	Ensembl	877 nt
ncRNA	tpt1-005 (1) Ensembl	Ensembl	816 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations