Transcript

actn1-004

ID

ZDB-TSCRIPT-090929-20774

Name

actn1-004 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

actn1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000135741 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000135741.2|gene_biotype:protein_coding|ENSDARG00000007219.11 transcript_biotype:retained_intron gene_symbol:actn1 cdna chromosome:GRCz11:13:36321364:36322604:-1
CGCTATCCCATGATGCCATGCTAGAGAATTCTTGAATGTG
ATTGAAGTGACTCAACTGACTCAGGCAGGTCATGTGACAA
TGACAAATGGTGAATACAGTACCTTCGAAATCCATTCATA
CTCCTGACATTCATACTATATAGAAAGTAGTTTTCTAATG
ATTGTGTAGTAAATTAAATTCCAATGTAGTACCACCTACT
AAGTAGTAGGCAATTTCAGATGCAGCCAAACACTTTTTTT
AGTGAATCAACTTAAAGTACAACCTAAAGTATAACAATGT
GCACAACAAAATAATTTTATTTCACACAAACCTCAGTGAA
CACGTAACCCTGTCTTGCTGCAGAACTATATCCTGGCGGA
TGAGCTGAGGCGTGAGCTGCCCCCCGACCAGGCCGAATAC
TGCATCGCCCGCATGACGCCTTACAGCGGGCCTGATTCCG
TCCCGGGAGCGCTCGACTACATGTCTTTCTCTACCGCCCT
GTATGGGGAGAGCGACCTCTGAACCGTGACCTGCCTTCTC
CTACAAACACACAGAAACGCATATTCATACACACACACAG
CTCGCACACTATGAAGCAGTAACAGTGGCTCTTAAACGCT
GATCTGGAACCAACATGCAGAACTGGTCCCAGATCAGCCA
ATCAGAGCAGCTTCCATCAGCTCCACCCAATGACGTTGGC
TCGTTTTTTTTTTTTGTATCGTCCTTTCAGCCCTTCCTGT
GTGTCATATACGACTTCCTGCTCTTTCTCTCCAGTGTGTT
CATGAAGTCTGTCTTGCCTGCTTTAGGGATCGTGTCAGAA
ATGCTGCCTTCACATGCTCGTCTGGATATCACATTAGTGT
ATGTGACATTATGCAACAATCGGTTTGGAATATGTGTAAC
GGCAGCATCATGTGACCTCTGACTGCATGTTGATGTGATG
CGATTGGTTCAC

OTTDART00000040660 (1) [ Show ] (double-click sequence to select)

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>tpe|OTTDART00000040660|OTTDARG00000029602|ZDB-GENE-081113-4 actn1|no_translation DKEY-22K11.3-004 LG_ CR361558.6 Danio rerio protein_coding NOVEL, 932 bp
CGCTATCCCATGATGCCATGCTAGAGAATTCTTGAATGTG
ATTGAAGTGACTCAACTGACTCAGGCAGGTCATGTGACAA
TGACAAATGGTGAATACAGTACCTTCGAAATCCATTCATA
CTCCTGACATTCATACTATATAGAAAGTAGTTTTCTAATG
ATTGTGTAGTAAATTAAATTCCAATGTAGTACCACCTACT
AAGTAGTAGGCAATTTCAGATGCAGCCAAACACTTTTTTT
AGTGAATCAACTTAAAGTACAACCTAAAGTATAACAATGT
GCACAACAAAATAATTTTATTTCACACAAACCTCAGTGAA
CACGTAACCCTGTCTTGCTGCAGAACTATATCCTGGCGGA
TGAGCTGAGGCGTGAGCTGCCCCCCGACCAGGCCGAATAC
TGCATCGCCCGCATGACGCCTTACAGCGGGCCTGATTCCG
TCCCGGGAGCGCTCGACTACATGTCTTTCTCTACCGCCCT
GTATGGGGAGAGCGACCTCTGAACCGTGACCTGCCTTCTC
CTACAAACACACAGAAACGCATATTCATACACACACACAG
CTCGCACACTATGAAGCAGTAACAGTGGCTCTTAAACGCT
GATCTGGAACCAACATGCAGAACTGGTCCCAGATCAGCCA
ATCAGAGCAGCTTCCATCAGCTCCACCCAATGACGTTGGC
TCGTTTTTTTTTTTTGTATCGTCCTTTCAGCCCTTCCTGT
GTGTCATATACGACTTCCTGCTCTTTCTCTCCAGTGTGTT
CATGAAGTCTGTCTTGCCTGCTTTAGGGATCGTGTCAGAA
ATGCTGCCTTCACATGCTCGTCTGGATATCACATTAGTGT
ATGTGACATTATGCAACAATCGGTTTGGAATATGTGTAAC
GGCAGCATCATGTGACCTCTGACTGCATGTTGATGTGATG
CGATTGGTTCAC

Related Transcripts

Transcripts related to actn1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	actn1-202 (1) Ensembl	Ensembl	3,658 nt	Select Tool
aberrant processed transcript	actn1-203 (1) Ensembl	Ensembl	993 nt	Select Tool
mRNA	actn1-201 (1) Ensembl	Ensembl	3,664 nt	Select Tool ZFIN BLAST
mRNA	actn1-205 (1) Ensembl	Ensembl	3,981 nt	Select Tool
ncRNA	actn1-004	Ensembl	932 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations