Transcript

actn1-202

ID
ZDB-TSCRIPT-090929-20772
Name
actn1-202 Nomenclature History
Previous Names
  • actn1-002
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000133740 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000133740.3|gene_biotype:protein_coding|ENSDARG00000007219.11 transcript_biotype:nonsense_mediated_decay gene_symbol:actn1 cdna chromosome:GRCz11:13:36321091:36391491:-1
CGATGCTCGTGCTGGAGGTTCTGCCTACTCGCCACTCTGG
ATAGCGGCGGTGAAAAAACGGACAGAGCTAGAAAGACGAG
GAGATACAGACTTTGGTGTGAGTGAACGGGGCAGGGAAAC
GAGGCAGTGACGTTAGTTTCGTGCTCATCGTTTTAAGTGC
GCACGGGAGTGTTTACTGCAGCGCTCTGTGGGAGAGAGAG
AGAGAGAGACCGGAGGACCGGAGAGAGACGGGGACAGCAG
TTCAGAATGGATCACCACCACCATCCACAACATCACCATC
ACCATCAATATGATGGAGGAGAGAACGACTATATGCAGCA
GGAAGATGACTGGGACCGGGATATGCTGCTCGACCCCGCC
TGGGAGAAACAGCAGAGAAAGACGTTTACTGCCTGGTGCA
ATTCTCATCTACGGAAGGCGGGTACACAAATTGAAAACAT
AGAGGAGGATTTTAGAGACGGACTCAAACTCATGCTGCTC
CTAGAGGTCATCTCAGGAGAACGCCTGGCCAAACCAGAGA
GAGGAAAAATGAGAGTCCACAAGATCTCCAATGTGAATAA
AGCTCTGGGCTTCATCGCCAGCAAAGGAGTCAAACTGGTT
TCTATTGGAGCAGAGGAGATTGTTGATGGAAATGCTAAGA
TGACTCTCGGGATGATCTGGACCATTATCCTTCGCTTCGC
CATCCAGGACATCTCAGTGGAGGAGACCTCAGCGAAAGAA
GGCCTGCTGTTGTGGTGCCAGAGGAAAACGGCTCCCTACA
AAAATGTCAACATTCAGAATTTCCACATCAGCTGGAAGGA
TGGATTGGGCTTCTGTGCGCTCATTCACAGACATCGGCCA
GAGCTCATCGATTACAATAAACTGCGCAAGGACGACCCCA
TGACGAATCTGAACACGGCCTTCGATGTTGCTGAGAAGTA
TCTGGACATCCCGAAGATGCTGGACGCAGAAGATATTGTT
GGTACGGCCCGTCCCGATGAGAAGGCCATCATGACCTACG
TTTCTAGCTTCTACCATGCCTTCTCCGGGGCGCAGAAGGC
CGAAACGGCAGCCAATCGGATCTGCAAAGTGCTGGCTGTC
AATCAGGAGAACGAGCAGCTGATGGAGGACTATGAGAAAC
TAGCCAGTGATCTCCTGGAGTGGATTCGCAGAACCATCCC
GTGGTTGGAGAACCGCGTCCCAGAGAACACCATGCAGGCC
ATGCAGCAGAAGCTGGAGGATTTCCGGGACTACAGACGAC
TTCACAAACCACCCAAAGTTCAGGAAAAATGCCAGCTGGA
GATCAACTTCAACACACTGCAGACCAAACTGCGTCTCAGC
AACCGGCCAGCGTTCATGCCTTCGGAGGGAAAGATGGTCT
CGGACATCTCCAATTCATGGGGACGTCTGGAGGGGGCAGA
GAAGGGTTATGAAGAGTGGCTGCTCAATGAGATCCGCAGA
CTTGAGAGACTCGATCATCTTGCTGAGAAATTCCGCCAAA
AAGCTGCCATTCACGAGGCCTGGACTGACGGTAAAGAGGA
GATGTTGCAGCACAAAGACTTTGAGACGGCGTCACTGTCC
GAGATCAAGGCTCTGCTGAAGAAACACGAGGCCTTTGAGA
GCGACCTCGCAGCTCATCAGGACAGAGTGGAGCAGATCGC
TGCCATCGCTCAGGAGCTCAATGAGCTGGAGTATTACGAC
TCTCCCAGTGTAAATGCTCGCTGTCAGCGCATCTGTGATC
AGTGGGATTCGCTGGGAGTGTTAACTCAGAAACGCAGTGA
GGCCTTGCAGAGAACTGAGAAACTGTTGGAAACTATTGAT
CAGCTTTACCTGGAGTTCGCCAAAAGAGCAGCGCCCTTTA
ATAACTGGATGGAGGGAGCAATGGAGGACCTGCAGGACAC
TTTTATAGTCCACACCATTGAGGAAATACAGGGTCTCAGC
ACAGCCCATGAGCAGTTTAAAGCCACACTGCCTGAGGCAG
ATAAGGAGCGACAGGCCATCCTGGGCATCCATAATGAAAT
TGCTAAAATTGTGCAGACATACCACGTCAACATGGCTGGC
CAAAACCCCTACACCACCATCAACCCCCAGGAGATCAATG
CCAAGTGGGATAAGGTGAGGCAGTTGGTGCCCCAGAGAGA
TCAGGCCCTGATAGAGGAACACGCTCGTCAGCAGAATAAT
GAGAGGCTGCGCAGACAGTTTGCTAATCAGGCTAATGTTA
TCGGGCCCTGGATCCAGACCAAGATGGAGGAAATCGGCCG
AATCTCTATTGAGATGCACGGGACTTTGGAGGATCAGCTG
ACCCACCTGCGTCAGTACGAAAAGAGCATTGTAAACTACA
AACCAAAGATCGACCAGCTGGAGGGGGACCATCAGCTAAT
ACAGGAAGCACTTATATTTGACAATAAACACACTAACTAC
ACCATGGAGCACATCCGTGTGGGTTGGGAGCAGCTCCTCA
CCACCATCGCTCGCACCATTAATGAGATTGAAAACCAGAT
CCTGACACGTGACGCCAAAGGCATCAGCCAGGAGCAAATG
AATGAGTTCAGAGCCTCGTTCAACCACTTCGACCGAGACC
ACTCGGGCACTCTGGGCGCTGAGGAGTTCAAAGCCTGCCT
TATCAGTCTGGGCTTCGATATCGGGAACGACGCTCAGGGA
GAGGCGGAGTTTGCTCGCATCATGAGCATCGTGGATCCCA
ACAGACTGGGAGTCGTCACATTCCAGGCCTTCATTGACTT
CATGTCCCGCGAAACGGCTGACACGGACACTGCAGATCAG
GTCATGGCATCATTTAAAGTCCTCGCTGGAGACAAGAACT
ATATCCTGGCGGATGAGCTGAGGCGTGAGCTGCCCCCCGA
CCAGGCCGAATACTGCATCGCCCGCATGACGCCTTACAGC
GGGCCTGATTCCGTCCCGGGAGCGCTCGACTACATGTCTT
TCTCTACCGCCCTGTATGGGGAGAGCGACCTCTGAACCGT
GACCTGCCTTCTCCTACAAACACACAGAAACGCATATTCA
TACACACACACAGCTCGCACACTATGAAGCAGTAACAGTG
GCTCTTAAACGCTGATCTGGAACCAACATGCAGAACTGGT
CCCAGATCAGCCAATCAGAGCAGCTTCCATCAGCTCCACC
CAATGACGTTGGCTCGTTTTTTTTTTTTGTATCGTCCTTT
CAGCCCTTCCTGTGTGTCATATACGACTTCCTGCTCTTTC
TCTCCAGTGTGTTCATGAAGTCTGTCTTGCCTGCTTTAGG
GATCGTGTCAGAAATGCTGCCTTCACATGCTCGTCTGGAT
ATCACATTAGTGTATGTGACATTATGCAACAATCGGTTTG
GAATATGTGTAACGGCAGCATCATGTGACCTCTGACTGCA
TGTTGATGTGATGCGATTGGTTCACTTTTTTTACCTTCTG
TAAATGCTCGTTGATGAGACGGCGAGTCAGATTTCATGAA
CAGATCTTCTCCTTTTCTGCTTCCAAATGTAACATTGAAA
AACTTCCCCACAGGAGGAATGTTTTGTGTATTTTTACTTC
TTGTTTTGTTTTTTTCTCCTCTTCATAAAGGAATAAAGGT
AACATATTTTATTATACAGAACAAAAAAAGGTATTTTTCT
TCACCTTATTAAAAAAACGTTTAAAAAAAATGAAAATTTA
AATAAAGAAACGATCACA

OTTDART00000040658 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000040658|OTTDARG00000029602|ZDB-GENE-081113-4 actn1|OTTDARP00000032491 DKEY-22K11.3-002 LG_ CR361558.6 Danio rerio protein_coding NOVEL, 3658 bp
CGATGCTCGTGCTGGAGGTTCTGCCTACTCGCCACTCTGG
ATAGCGGCGGTGAAAAAACGGACAGAGCTAGAAAGACGAG
GAGATACAGACTTTGGTGTGAGTGAACGGGGCAGGGAAAC
GAGGCAGTGACGTTAGTTTCGTGCTCATCGTTTTAAGTGC
GCACGGGAGTGTTTACTGCAGCGCTCTGTGGGAGAGAGAG
AGAGAGAGACCGGAGGACCGGAGAGAGACGGGGACAGCAG
TTCAGAATGGATCACCACCACCATCCACAACATCACCATC
ACCATCAATATGATGGAGGAGAGAACGACTATATGCAGCA
GGAAGATGACTGGGACCGGGATATGCTGCTCGACCCCGCC
TGGGAGAAACAGCAGAGAAAGACGTTTACTGCCTGGTGCA
ATTCTCATCTACGGAAGGCGGGTACACAAATTGAAAACAT
AGAGGAGGATTTTAGAGACGGACTCAAACTCATGCTGCTC
CTAGAGGTCATCTCAGGAGAACGCCTGGCCAAACCAGAGA
GAGGAAAAATGAGAGTCCACAAGATCTCCAATGTGAATAA
AGCTCTGGGCTTCATCGCCAGCAAAGGAGTCAAACTGGTT
TCTATTGGAGCAGAGGAGATTGTTGATGGAAATGCTAAGA
TGACTCTCGGGATGATCTGGACCATTATCCTTCGCTTCGC
CATCCAGGACATCTCAGTGGAGGAGACCTCAGCGAAAGAA
GGCCTGCTGTTGTGGTGCCAGAGGAAAACGGCTCCCTACA
AAAATGTCAACATTCAGAATTTCCACATCAGCTGGAAGGA
TGGATTGGGCTTCTGTGCGCTCATTCACAGACATCGGCCA
GAGCTCATCGATTACAATAAACTGCGCAAGGACGACCCCA
TGACGAATCTGAACACGGCCTTCGATGTTGCTGAGAAGTA
TCTGGACATCCCGAAGATGCTGGACGCAGAAGATATTGTT
GGTACGGCCCGTCCCGATGAGAAGGCCATCATGACCTACG
TTTCTAGCTTCTACCATGCCTTCTCCGGGGCGCAGAAGGC
CGAAACGGCAGCCAATCGGATCTGCAAAGTGCTGGCTGTC
AATCAGGAGAACGAGCAGCTGATGGAGGACTATGAGAAAC
TAGCCAGTGATCTCCTGGAGTGGATTCGCAGAACCATCCC
GTGGTTGGAGAACCGCGTCCCAGAGAACACCATGCAGGCC
ATGCAGCAGAAGCTGGAGGATTTCCGGGACTACAGACGAC
TTCACAAACCACCCAAAGTTCAGGAAAAATGCCAGCTGGA
GATCAACTTCAACACACTGCAGACCAAACTGCGTCTCAGC
AACCGGCCAGCGTTCATGCCTTCGGAGGGAAAGATGGTCT
CGGACATCTCCAATTCATGGGGACGTCTGGAGGGGGCAGA
GAAGGGTTATGAAGAGTGGCTGCTCAATGAGATCCGCAGA
CTTGAGAGACTCGATCATCTTGCTGAGAAATTCCGCCAAA
AAGCTGCCATTCACGAGGCCTGGACTGACGGTAAAGAGGA
GATGTTGCAGCACAAAGACTTTGAGACGGCGTCACTGTCC
GAGATCAAGGCTCTGCTGAAGAAACACGAGGCCTTTGAGA
GCGACCTCGCAGCTCATCAGGACAGAGTGGAGCAGATCGC
TGCCATCGCTCAGGAGCTCAATGAGCTGGAGTATTACGAC
TCTCCCAGTGTAAATGCTCGCTGTCAGCGCATCTGTGATC
AGTGGGATTCGCTGGGAGTGTTAACTCAGAAACGCAGTGA
GGCCTTGCAGAGAACTGAGAAACTGTTGGAAACTATTGAT
CAGCTTTACCTGGAGTTCGCCAAAAGAGCAGCGCCCTTTA
ATAACTGGATGGAGGGAGCAATGGAGGACCTGCAGGACAC
TTTTATAGTCCACACCATTGAGGAAATACAGGGTCTCAGC
ACAGCCCATGAGCAGTTTAAAGCCACACTGCCTGAGGCAG
ATAAGGAGCGACAGGCCATCCTGGGCATCCATAATGAAAT
TGCTAAAATTGTGCAGACATACCACGTCAACATGGCTGGC
CAAAACCCCTACACCACCATCAACCCCCAGGAGATCAATG
CCAAGTGGGATAAGGTGAGGCAGTTGGTGCCCCAGAGAGA
TCAGGCCCTGATAGAGGAACACGCTCGTCAGCAGAATAAT
GAGAGGCTGCGCAGACAGTTTGCTAATCAGGCTAATGTTA
TCGGGCCCTGGATCCAGACCAAGATGGAGGAAATCGGCCG
AATCTCTATTGAGATGCACGGGACTTTGGAGGATCAGCTG
ACCCACCTGCGTCAGTACGAAAAGAGCATTGTAAACTACA
AACCAAAGATCGACCAGCTGGAGGGGGACCATCAGCTAAT
ACAGGAAGCACTTATATTTGACAATAAACACACTAACTAC
ACCATGGAGCACATCCGTGTGGGTTGGGAGCAGCTCCTCA
CCACCATCGCTCGCACCATTAATGAGATTGAAAACCAGAT
CCTGACACGTGACGCCAAAGGCATCAGCCAGGAGCAAATG
AATGAGTTCAGAGCCTCGTTCAACCACTTCGACCGAGACC
ACTCGGGCACTCTGGGCGCTGAGGAGTTCAAAGCCTGCCT
TATCAGTCTGGGCTTCGATATCGGGAACGACGCTCAGGGA
GAGGCGGAGTTTGCTCGCATCATGAGCATCGTGGATCCCA
ACAGACTGGGAGTCGTCACATTCCAGGCCTTCATTGACTT
CATGTCCCGCGAAACGGCTGACACGGACACTGCAGATCAG
GTCATGGCATCATTTAAAGTCCTCGCTGGAGACAAGAACT
ATATCCTGGCGGATGAGCTGAGGCGTGAGCTGCCCCCCGA
CCAGGCCGAATACTGCATCGCCCGCATGACGCCTTACAGC
GGGCCTGATTCCGTCCCGGGAGCGCTCGACTACATGTCTT
TCTCTACCGCCCTGTATGGGGAGAGCGACCTCTGAACCGT
GACCTGCCTTCTCCTACAAACACACAGAAACGCATATTCA
TACACACACACAGCTCGCACACTATGAAGCAGTAACAGTG
GCTCTTAAACGCTGATCTGGAACCAACATGCAGAACTGGT
CCCAGATCAGCCAATCAGAGCAGCTTCCATCAGCTCCACC
CAATGACGTTGGCTCGTTTTTTTTTTTTGTATCGTCCTTT
CAGCCCTTCCTGTGTGTCATATACGACTTCCTGCTCTTTC
TCTCCAGTGTGTTCATGAAGTCTGTCTTGCCTGCTTTAGG
GATCGTGTCAGAAATGCTGCCTTCACATGCTCGTCTGGAT
ATCACATTAGTGTATGTGACATTATGCAACAATCGGTTTG
GAATATGTGTAACGGCAGCATCATGTGACCTCTGACTGCA
TGTTGATGTGATGCGATTGGTTCACTTTTTTTACCTTCTG
TAAATGCTCGTTGATGAGACGGCGAGTCAGATTTCATGAA
CAGATCTTCTCCTTTTCTGCTTCCAAATGTAACATTGAAA
AACTTCCCCACAGGAGGAATGTTTTGTGTATTTTTACTTC
TTGTTTTGTTTTTTTCTCCTCTTCATAAAGGAATAAAGGT
AACATATTTTATTATACAGAACAAAAAAAGGTATTTTTCT
TCACCTTATTAAAAAAACGTTTAAAAAAAATGAAAATTTA
AATAAAGAAACGATCACA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations