Transcript

actn1-203

ID

ZDB-TSCRIPT-090929-20773

Name

actn1-203 Nomenclature History

Previous Names

actn1-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

actn1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000133858 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000133858.2|gene_biotype:protein_coding|ENSDARG00000007219.11 transcript_biotype:nonsense_mediated_decay gene_symbol:actn1 cdna chromosome:GRCz11:13:36321431:36330899:-1
GTAAACTACAAACCAAAGATCGACCAGCTGGAGGGGGACC
ATCAGCTAATACAGGAAGCACTTATATTTGACAATAAACA
CACTAACTACACCATGGAGCACATCCGTGTGGGTTGGGAG
CAGCTCCTCACCACCATCGCTCGCACCATTAATGAGATTG
AAAACCAGATCCTGACACGTGACGCCAAAGGCATCAGCCA
GGAGCAAATGAATGAGTTCAGAGCCTCGTTCAACCACTTC
GACCGAAAGAGAACAGGCATGATGGATGCTGAAGACTTCA
GAGCCTGCCTCATCTCCATGGGTTATAATATGGGAGAGGC
GGAGTTTGCTCGCATCATGAGCATCGTGGATCCCAACAGA
CTGGGAGTCGTCACATTCCAGGCCTTCATTGACTTCATGT
CCCGCGAAACGGCTGACACGGACACTGCAGATCAGGTCAT
GGCATCATTTAAAGTCCTCGCTGGAGACAAGAACTATATC
CTGGCGGATGAGCTGAGGCGTGAGCTGCCCCCCGACCAGG
CCGAATACTGCATCGCCCGCATGACGCCTTACAGCGGGCC
TGATTCCGTCCCGGGAGCGCTCGACTACATGTCTTTCTCT
ACCGCCCTGTATGGGGAGAGCGACCTCTGAACCGTGACCT
GCCTTCTCCTACAAACACACAGAAACGCATATTCATACAC
ACACACAGCTCGCACACTATGAAGCAGTAACAGTGGCTCT
TAAACGCTGATCTGGAACCAACATGCAGAACTGGTCCCAG
ATCAGCCAATCAGAGCAGCTTCCATCAGCTCCACCCAATG
ACGTTGGCTCGTTTTTTTTTTTTGTATCGTCCTTTCAGCC
CTTCCTGTGTGTCATATACGACTTCCTGCTCTTTCTCTCC
AGTGTGTTCATGAAGTCTGTCTTGCCTGCTTTAGGGATCG
TGTCAGAAATGCTGCCTTCACATGCTCGTCTGGATATCAC
ATTAGTGTATGTGACATTATGCAACAATCGGTT

OTTDART00000040659 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000040659|OTTDARG00000029602|ZDB-GENE-081113-4 actn1|OTTDARP00000032492 DKEY-22K11.3-003 LG_ CR361558.6 Danio rerio protein_coding NOVEL, 993 bp
GTAAACTACAAACCAAAGATCGACCAGCTGGAGGGGGACC
ATCAGCTAATACAGGAAGCACTTATATTTGACAATAAACA
CACTAACTACACCATGGAGCACATCCGTGTGGGTTGGGAG
CAGCTCCTCACCACCATCGCTCGCACCATTAATGAGATTG
AAAACCAGATCCTGACACGTGACGCCAAAGGCATCAGCCA
GGAGCAAATGAATGAGTTCAGAGCCTCGTTCAACCACTTC
GACCGAAAGAGAACAGGCATGATGGATGCTGAAGACTTCA
GAGCCTGCCTCATCTCCATGGGTTATAATATGGGAGAGGC
GGAGTTTGCTCGCATCATGAGCATCGTGGATCCCAACAGA
CTGGGAGTCGTCACATTCCAGGCCTTCATTGACTTCATGT
CCCGCGAAACGGCTGACACGGACACTGCAGATCAGGTCAT
GGCATCATTTAAAGTCCTCGCTGGAGACAAGAACTATATC
CTGGCGGATGAGCTGAGGCGTGAGCTGCCCCCCGACCAGG
CCGAATACTGCATCGCCCGCATGACGCCTTACAGCGGGCC
TGATTCCGTCCCGGGAGCGCTCGACTACATGTCTTTCTCT
ACCGCCCTGTATGGGGAGAGCGACCTCTGAACCGTGACCT
GCCTTCTCCTACAAACACACAGAAACGCATATTCATACAC
ACACACAGCTCGCACACTATGAAGCAGTAACAGTGGCTCT
TAAACGCTGATCTGGAACCAACATGCAGAACTGGTCCCAG
ATCAGCCAATCAGAGCAGCTTCCATCAGCTCCACCCAATG
ACGTTGGCTCGTTTTTTTTTTTTGTATCGTCCTTTCAGCC
CTTCCTGTGTGTCATATACGACTTCCTGCTCTTTCTCTCC
AGTGTGTTCATGAAGTCTGTCTTGCCTGCTTTAGGGATCG
TGTCAGAAATGCTGCCTTCACATGCTCGTCTGGATATCAC
ATTAGTGTATGTGACATTATGCAACAATCGGTT

Related Transcripts

Transcripts related to actn1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	actn1-202 (1) Ensembl	Ensembl	3,658 nt	Select Tool
aberrant processed transcript	actn1-203	Ensembl	993 nt
mRNA	actn1-201 (1) Ensembl	Ensembl	3,664 nt	Select Tool ZFIN BLAST
mRNA	actn1-205 (1) Ensembl	Ensembl	3,981 nt	Select Tool
ncRNA	actn1-004 (1) Ensembl	Ensembl	932 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations