Gene

rbpms2b

ID
ZDB-GENE-040426-741
Name
RNA binding protein, mRNA processing factor 2b
Symbol
rbpms2b Nomenclature History
Previous Names
  • rbpms2
  • Hermes (1)
  • zgc:55559 (1)
  • zgc:77170 (1)
Type
protein_coding_gene
Location
Chr: 7 Mapping Details/Browsers
Description
Exhibits mRNA binding activity. Involved in female sex differentiation and generation of neurons. Is expressed in several structures, including cardiovascular system; gonad; optic vesicle; retina; and ventral mesoderm. Orthologous to human RBPMS2 (RNA binding protein, mRNA processing factor 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
19 figures from 10 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
1 Figure from Kaufman et al., 2018
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With rbpms2b Human Ortholog
No data available
Associated With rbpms2b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000504 RNA recognition motif domain
Domain IPR034787 RBPMS2, RNA recognition motif
Homologous_superfamily IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily IPR035979 RNA-binding domain superfamily
Domain Details Per Protein
Protein Length Nucleotide-binding alpha-beta plait domain superfamily RBPMS2, RNA recognition motif RNA-binding domain superfamily RNA recognition motif domain
UniProtKB:Q7ZUL7 200
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
aberrant processed transcript rbpms2b-202 (1) Ensembl 768 nt
mRNA rbpms2b-201 (1) Ensembl 1,911 nt
mRNA rbpms2b-206 (1) Ensembl 764 nt
mRNA rbpms2b-207 (1) Ensembl 871 nt
mRNA rbpms2b-208 (1) Ensembl 317 nt
ncRNA rbpms2b-005 (1) Ensembl 730 nt
ncRNA rbpms2b-006 (1) Ensembl 502 nt
ncRNA rbpms2b-008 (1) Ensembl 832 nt
Interactions and Pathways
No data available
Antibodies
Name Type Antigen Genes Isotype Host Organism Assay Source Citations
Ab1-rbpms2 polyclonal Rabbit
  • IHC
6
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations