Mapping Details

GENETIC MAPPING PANELS

Chr	Location	Mapped As	Panel	Mapped By	Scoring
15	14.3 cM	z15442	Boston MGH Cross (MGH)	Fishman, Mark C.	Data
15	43.33 cR	Z15442	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data
15	7.3 cM	z15442	Heat Shock (HS)	Woods, Ian G.	Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS

Marker	Type	Chr	Distance	Publication / Person	Comments
z6312	SSLP	15	30.26 cR	Auer et al., 2007	Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ... Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and syntenic region on human 11q22-23 to zebrafish LG 15. The genes were mapped using the LN54 RH panel in the order: (snf1lk2b, sdhd, bcdo2) - z15442 - atm - laynb - npat - z22027.
z22027	SSLP	15		Auer et al., 2007	Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ... Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and syntenic region on human 11q22-23 to zebrafish LG 15. The genes were mapped using the LN54 RH panel in the order: (snf1lk2b, sdhd, bcdo2) - z15442 - atm - laynb - npat - z22027.
laynb	GENE	15		Auer et al., 2007	Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ... Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and syntenic region on human 11q22-23 to zebrafish LG 15. The genes were mapped using the LN54 RH panel in the order: (snf1lk2b, sdhd, bcdo2) - z15442 - atm - laynb - npat - z22027.
sdhdb	GENE	15		Auer et al., 2007	Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ... Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and syntenic region on human 11q22-23 to zebrafish LG 15. The genes were mapped using the LN54 RH panel in the order: (snf1lk2b, sdhd, bcdo2) - z15442 - atm - laynb - npat - z22027.
npat	GENE	15		Auer et al., 2007	Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ... Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and syntenic region on human 11q22-23 to zebrafish LG 15. The genes were mapped using the LN54 RH panel in the order: (snf1lk2b, sdhd, bcdo2) - z15442 - atm - laynb - npat - z22027.
sik2b	GENE	15		Auer et al., 2007	Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ... Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and syntenic region on human 11q22-23 to zebrafish LG 15. The genes were mapped using the LN54 RH panel in the order: (snf1lk2b, sdhd, bcdo2) - z15442 - atm - laynb - npat - z22027.
atm	GENE	15	55.04 cR	Auer et al., 2007	Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ... Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and syntenic region on human 11q22-23 to zebrafish LG 15. The genes were mapped using the LN54 RH panel in the order: (snf1lk2b, sdhd, bcdo2) - z15442 - atm - laynb - npat - z22027.
bco2b	GENE	15		Auer et al., 2007	Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ... Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and syntenic region on human 11q22-23 to zebrafish LG 15. The genes were mapped using the LN54 RH panel in the order: (snf1lk2b, sdhd, bcdo2) - z15442 - atm - laynb - npat - z22027.

OTHER MAPPING INFORMATION

Primer Sets:

Strain	Bandsize	Restriction Enzyme	Annealing Temperature [C]
AB	312,308,0,314		60.0
Forward Primer	CAAGGCAAACAACAAGTGGA
Reverse Primer	TGTTAAACCGTTGAGGGCAT
IND	316,0,312		60.0
Forward Primer	CAAGGCAAACAACAAGTGGA
Reverse Primer	TGTTAAACCGTTGAGGGCAT
TU	308,306		60.0
Forward Primer	CAAGGCAAACAACAAGTGGA
Reverse Primer	TGTTAAACCGTTGAGGGCAT
EKW	304,0,316		60.0
Forward Primer	CAAGGCAAACAACAAGTGGA
Reverse Primer	TGTTAAACCGTTGAGGGCAT