ZFIN ID: ZDB-GENE-000509-1

Mapping Details

Gene Name:	basic helix-loop-helix ARNT like 1a
Symbol:	bmal1a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN JBrowse	25	17,893,784 - 17,918,810	GRCz11
Ensembl	25	17,893,784 - 17,918,810	GRCz11
Vega	25	17,797,384 - 17,822,410	GRCv10
NCBI Map Viewer	25	17,893,783 - 17,918,853	GRCz11
UCSC	25	-	GRCz11

Mapped Clones containing bmal1a
CH211-244M13	Chr: 25 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Citations
ct803	25	17,910,547 - 17,910,607	GRCz11	Chen et al., 2013
ihb734	25	17,905,105 - 17,905,108	GRCz11	Zebrafish Nomenclature Committee
ihb735	25	17,905,101 - 17,905,110	GRCz11	Zebrafish Nomenclature Committee
sa24645	25	17,907,071	GRCz11	Busch-Nentwich et al., 2013
	25	17,810,671	GRCz10	Busch-Nentwich et al., 2013
	25	18,394,361	Zv9	Busch-Nentwich et al., 2013
sa38044	25	17,910,814	GRCz11	Busch-Nentwich et al., 2013
	25	17,814,414	GRCz10	Busch-Nentwich et al., 2013
	25	18,398,104	Zv9	Busch-Nentwich et al., 2013

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
25	246.22 cR	bmal1	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
z669	SSLP	22		ZFIN Curated Data	While investigating arntl1a (bmal1) gene, bmal1 was found on Sanger ctg15465 ...
z11262	SSLP	22		ZFIN Curated Data	While investigating arntl1a (bmal1) gene, bmal1 was found on Sanger ctg15465 ...
z1148	SSLP	22		ZFIN Curated Data	While investigating arntl1a (bmal1) gene, bmal1 was found on Sanger ctg15465 ...

Chr 22

ZFIN Curated Data

While investigating arntl1a (bmal1) gene, bmal1 was found on Sanger ctg15465 near SSLP markers ...

Markers Encoded by bmal1a
fa04g03 Chr: 25 Details

Genomic Feature ct803 is an allele of bmal1a