Genomic Feature
ot218
- ID
- ZDB-ALT-211026-1
- Name
- ot218
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Marc Ekker Lab
- Current Source
- Other Pages
-
Notes
| Comment | Citation |
|---|---|
| Line contains a 218 bp deletion in exon 3. | Wong et al., 2020 |
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 10: 1412650 - 1412867 (GRCz11) (1) Details
- Nucleotide change
- AACGGGACTGTACCCGGAGCAGTTCGAGGACGTAATGGACTTCATCGAAGCCACTCTGGGCCGCCTGCGCAGATCCTCAGACGTAGAACCTCAGATGAAGCGGGACAGGGTCCGACAGAAAGCAGCAGCAAACACGGAGAAATACGGAGGACGGGGACGAGGAGAGCGCAAGAGGAGCCGCGGACGGGCCCGGAGCAGAGACGACCGGGTCAAAGGTC/-
- Variant Notes
-
Line contains a 218 bp deletion in exon 3.
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 218 bp deleted in Exon 3 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TACGCCCTGAATCTGCACAGTTCTGACTTTCATTTTCAAAGCGTCTGCTAGTTATTTTAGTTTCAAGATCTGAGGTAAACGATCTGCTGCTGTTTTCAGTAGTTTGTAATAAATGTCATGTTACAAAAATTATCTAAACTCACTATTATCACTGAATAAAGCCCATAATCAGCACCCGAGGGGATCTTTGTGTTAATAGTTTATGCTGTTGTTTATTTGTGGCGTAGAAAGCATTTCTAAAATAGAAATTTTGCACGTTGGTTGGGACAAAAACTCCTTTAAAATTGTAATATATAGCTTTTATTTGTGACGGATGCTGTTGGGACACGGTGTTAGAGCACAATGGTTTTTGTACCTGACTTGTGTCCTCACGTCCTCGGGAGTTCGTTCTTGCAAGTCTGAACTTCCAAGGACGCAAGAGAACCAGCCCGTTTAAGGATCTTCAAGCCAAATGCATAACAGAATCTGACGTATGTTGTTTTATCTGTTGAAGATGACCT
AACGGGACTGTACCCGGAGCAGTTCGAGGACGTAATGGACTTCATCGAAGCCACTCTGGGCCGCCTGCGCAGATCCTCAGACGTAGAACCTCAGATGAAGCGGGACAGGGTCCGACAGAAAGCAGCAGCAAACACGGAGAAATACGGAGGACGGGGACGAGGAGAGCGCAAGAGGAGCCGCGGACGGGCCCGGAGCAGAGACGACCGGGTCAAAGGTC/- AAGGGCGCGGCTGCCTACTTAAAGAGATCCATCTGAACGTCACAGACCTGGACTTGGGTTACAGGACCAAAGAGGAGCTGATCTTCCGCTACTGCAGCGGCCCGTGTCACGATGCCGAGACCAACTACGACAAGATCCTCAACAATCTCACCCACAACAAGAAGCTAGACAAGGACACGCCGTCCCGAACCTGCTGCCGGCCCATCGCATTCGACGACGACATCTCTTTTCTGGACGACAGCTTGGAGTATCACACGCTGAAGAAGCATTCCGCTAAAAAGTGTGCTTGCGTTTGACCGCACAGGAACAGGACTCTCTCTAGAAGAGAGCAGACGAGGGTGTTTTCAGTATTCACTTTGTTACCGAACCACGAGCATTCATACAGCAACAAACACCTGTTGTTTTGGTGGAATAAGGAAGCTTCAGTGGGATTATAATGTCAGAGAGACGCCGCCACGATGACAGCAGACTGCAAATCTTTAATATCCAGAAAGCTATCA - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None