Genomic Feature

hg122

ID
ZDB-ALT-201103-3
Name
hg122
Synonyms
  • delta uba1 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Burgess Lab
Current Source
Zebrafish International Resource Center (ZIRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 23: 20650558 - 20650561 (GRCz11) (1) Details
Nucleotide change
CCAA/-
Variant Notes
mutation in exon 5. Genomic DNA sequence:

CTCCTACACT GGCACCCTCA (CCAA deleted)  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
4 bp deleted in Exon 5 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TGTATTAAAACGTGTTTGTCGTAAAAATTCGTAATAATGACAAAAAATATGAATTTGTGCATCTCCTGATTCCGGGTGAAGATATGCTGCCATTGTAGAATTGGGATGAAAAAAAAATTAAATGAATGAATAAACGTGTACGTCAGTTCAAAATATTACTGTTATTATTATTATTATTATTATTATATATAGATTTTTTTAAAGGCAATGTTGGTGAGCACAAGAGACTTTTTCTAAAATAATTTTTAAAATCTTACCAAACCCAAACTTTTGTACTGTTCTCTACATAAACAAATGAAAAAAAATCCATATATTGTTTCTGGAAGTGTAAGAATAAACATTAATAATCTACAGTAGTAGAAATACAATTTTGTTTGCTTCATGTTCCTAGTTTTACCTGCGTGAGGAGGATCTTGGGAAGAACCGTGCTGATGTCAGTCAGCCTCGACTGGCAGAACTGAACAGTTATGTGCCTGTAACCTCCTACACTGGCACCCTCA
CCAA/- TGAATACCTGACCAAATTTCAGGTACTGCTGCTATTGCTCCACTGGACTTTAACTTTGATCTCTTATAAGGATTACAAATTATTTTCTCTAAATGCATATTAAACTTTGCATTATAGCTGAACTGAAGTTTGAAGCTGTTAGCTAATAGGTCTTTGTATGCTTTTGTCCAGGTTGTTGTGCTCACCAACTCTAGTCTTGATGAACAGACACGTATCGGGGAATTTTGCCACAGTAATGGCATCAAGTTGATTGTGGCAGACACACGTGGACTGTTTGGGTATGAATATTTAAAAGATATGACATTTTTTAAGGTTTTTTTTTTCCTCCATGTAACTTTTTCATAAACATTCTGTTATTTAATAGGCAACTGTTCTGTGATTTTGGGGAGGAAATGATAGTATTCGACACAAACGGAGAACAGCCATTGAGCGCCATGATCTCAATGATCACAAAAGTAAGAGCCTGTGTGATTCTACCATTGAGCCTTTTTAATGCAGGA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations