Genomic Feature
hg93
- ID
- ZDB-ALT-200204-5
- Name
- hg93
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Sood Lab
- Current Source
- Zebrafish International Resource Center (ZIRC) ( order this )
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 7: 71327244 - 71327251 (GRCz11) (1) Details
- Nucleotide change
- GACCTCCT/-
- Variant Notes
-
Deletion 8 bp in exon 3, cDNA: 566_573delAGGAGGTC, p. Gln189ArgfsX10
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 8 bp deleted in Exon 3 (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
GCAGCAGAAGTCGTCATAGTTGGTAAACTTTTAGTGCAGTAAACGAGAGAGTGCAACAAATAATTGTTTTAAAATCCTATTTGCTAAAAAAAGAAAAGAAAAACTCCACAATGGTGTTATCACGACTTTCAGAAAAAGGAAAACGATAGTGTGAGACTGATAACTGTAGCCAGAAGAGAAAACAACATCCGATTTACTGTCCTGCCCCCATACGCGCTGCATTTCAACACCCTCGTACAAATAGTCATTTGTTTTTAGTAACTTTACGCAAAGATGATGTAATACAAACACAATTACAAATAAAAGTTAAAGCATTTTTATATCACAATATTAAAAACGTTCAAGTATTCAAGATGCTGATGACTATTACACGCGTCTTGTGAAAAGGGTGCATTGACTTCCACTTTATTGAAGGCTCATGACACACATCATTTGAGAGCAATGACTTACTTTAGTATGGTCTTTGCAGAGCTACAGTCCTCGAATCTGATGGAGTATCC
GACCTCCT/- GACCCAGCATGACATCCATCTCATCTGCCACTCTCTGAGCCACACTCATGGCTGCCACCCTTCTGGGCTGAGTACAGGCCACGCCGCGCTTCGGGCCAGGCAGAGACCTGACCATGTCAACACACCACTGAGGGATCTGAAAAACAACAGTCCAAACATCCATTAAAAGCTCCTTATTGTGGTTTTATTAAGCCTTGTGTGCTGTTGGGGATGTTTTTAATCCAATCTGGGGGGATTTTGAGACTTAATTTGGCCACAACCTTCTCAGTGTTTCAGCAAATGGAATGATTTTTGGTAATTAATCTTATTTTGACATATTTTGGGAAAACACTTTGAAAATTTTCAAAAACTGAACTTTTAATATACTCTAGGCAAATTTACTACACTTTCATTATGTTGGTGGCTGTTTTTGACCCATTGATTTCCATTATAATGACGTTTTGTGATTGCAAAGTCATGACTAGGTGTATTCTTTATTCTTGGTGGTTTTCCCTGTTGGG - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None