Genomic Feature
ups8
- ID
- ZDB-ALT-200203-2
- Name
- ups8
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Blader Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 9: 21723127 - 21723137 (GRCz11) (1) Details
- Nucleotide change
- TCCAAATTCGG/-
- Variant Notes
-
The 11 bp deletion leads to a premature stop codon at amino acid 62.
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 11 bp deleted (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
TAGAGGGGGCGGTGTTGACCCTTCGTGCACCCCGCCTACTAGTTCTTTCCTCGTTGTCTACGTCACTCGACCGAACTCCATGCAAATCGCTCCTCACTGGAACGCCATTGGCCGCTCGCTCATTTTAATCGCTGTCAAAACGCATCATATGGCCGCCGCTTTAACTAACTCTTCAACTCCACTAGGAAAAGTAACTCAAATGCACGTTCAATTAATGTGGATGTGAAGCGGCAGTCGGAGACGACACTAAACTGGCTACAGGAGCGAAAAGAGAGCCCGAAATTGTCAGCAAACGGTTGGGAATAAGCTGAATTCCACACTTCATCGGAGCTCCACTGGCTCGTGAAGCACCTGTTTCAAGCGGACTACGGAGCGCCGAAAGTTCATGCTTTTTCTCTGCTAGTTGAGAACTTTTAAGCCACTTGAATGTATAGCATGATGATGGAAACGGACCTTCATTCCCCGGGACCCCAAACCAACACGAACCCGGGGCAAACGGG
TCCAAATTCGG/- GGAGCAAAGCCAATCAAGACCGCGTAAAGAGACCCATGAACGCGTTTATGGTCTGGTCTCGGGGCCAGCGCCGAAAAATGGCACAGGAGAACCCCAAAATGCACAACTCTGAAATTAGCAAAAGACTCGGTGCTGAGTGGAAGGTGATGTCAGAGGCTGAAAAGCGGCCCTTTATTGATGAGGCGAAGCGGTTGCGAGCCATGCACATGAAAGAGCATCCGGATTACAAATACAGACCGAGGCGCAAAACCAAGACCCTGCTTAAAAAGGACAAGTACTCGTTGGCGGGTGGCTTGCTCGGCGGTGCGGGTGGTGGAGTCGGGATGAGTCCTGCGGGGGTCGGCCAGAGGTTGGAGAGTCCTGGGGGTCACGGAGGCTCGGCCAGCGCTGGCTACGCGCACATGAACGGCTGGGCGAACGGCACTTACTCCGGCCAGGTGGCTGCCGCGGCGGCGGCCGCCGCGATGATGCAGGAGGCGCAGCTCGCTTACAGCCAGCAC - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None