Genomic Feature

mi5003

ID
ZDB-ALT-190131-4
Name
mi5003
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Hitchcock Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 8: 24282275 - 24282297 (GRCz11) (1) Details
Nucleotide change
CCGTTGATGCCATGAAGCAGCCC/-
Variant Notes
23 bp deletion in exon 2, generating premature stop codon and protein turncation
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
23 bp deleted in Exon 2 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
ACTTTAAGTGTAATTGTCTTCCAGGTTAACTATAAGTAAGTCTGCAACTACATATCAGCTGTCTTGTTATACTGTCGGTTTTAATAGTACAAGTTGACATGTACTTGCAAACTTACTTATAGTTAGTAGAACATCTGTTAAAGGACTATTAAAATAAAGAGTTACGAGATAGTAATAAAACTTCAAAGACGTTAAATTGCAAATTTAAGAGACTGTTTAAAAGCAGACCATTAAACTAAAGTAGAAGCAGTTTTAGTTTATGATTTGTTTGGGTTTCTCCTCTCGGTTCTCTACTTTTAAAGTGCAAATAACTGGATGTTATAGCTCCGCATGATTTGTTTTGTCCATAAATGTTTGTCTTCAGGAGTATCTGAAGCGTTACGGCTACATCGATGTCCTCCAGAGGAGCGGACTGCAGGCGGTCGTCTCCAATACTAAAGCTCTGAAGAAGCTCCAGCGGCAGCTCGGTTTGGAGGAGACCGGCTTGCTTGACCAGCCCA
CCGTTGATGCCATGAAGCAGCCC/- CGCTGTGGCGTGCCGGACATCCGCAACTACAAGACATTCGACGGAGACCTGAAGTGGGATCACACAGATGTCACATACAGGTGGGACATTATTCACATTAAATCTTATACTAAATTTGTAATACTTTATGAGTTTTGTAATAGAGCTGCTTAATAAACGAATAAAATAGTGTGTGATGCACTAGAGATTCTGACTAAATGTTTTAATAAGCCAGTGTTTTTAATGGAATTTCTTGAATTAATTATTTAGTGACAAAAACATTTTTTTATCCATACCTTATCAGCATCTACAGTGTGTACATATACAAGTTCACCCCTCACAAATCTATCTTTTAAAGTCATATTTTCAATAGGAAGCTATACAATGTTATATTTGTGCATATACATTAAATTAGTCAGCACTGAAGCCAAATCTGCCGCTCATCTAACAAAATAACTTACGATAACGGTCCAAAAACTAGTATGCCCAAATTTATACGTTATAGAAAATTATTAAATACA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations