Genomic Feature

uob100

ID
ZDB-ALT-180907-1
Name
uob100
Synonyms
  • Δ25-29 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Monteiro Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 5: 32932379 - 32932383 (GRCz11) (1) Details
Nucleotide change
GCTCC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp deleted from position 25 to 29 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
GGTCCTGGCAAACAGTTAAAAACAACATTGTGCAACCCTACTGTGTATTCTGGGAAACTAACCACCAGCATAAGTAGTGTAAACATAAGACTACTACAGTTCATCTGAAAATAAAGTACCACTAAATCAGTTCTTTTCCTGTTCTTGCTCACCGTCATGTCCTGTGGAAAATTGTTTACATTATGTAGCAATGTGTTATAATGCCATTTGGTCATTCAGCATTTTTATGCTTATTTTTTTCTCGTCTCTGCATGTGGACATTGAAAATGAAATTAGTAACATGGGGAGAAATATATCTGTCATATCTGTCCCATTATTCTGCTATTATGTTCTCTAAGGATGAGGAGAATGTATTATGGTGATTTATTTGAAGAGGTTTGGGGGAGCATCTCTAATGGCTGATCTTCTGATAGTGGTGGAACTTTGCCTCTGGATCTGCTGATTTACGAGCGTCTCCTCTCTGTCCCGCAGGCAGGCAATGGTGAACAGTCGTGTGGAAA
GCTCC/- GCGGTTGCGGTAACAGGAGGCAGTGGTGGGGCCGTACGCTCCTGTGCTGGATGCGGTGGTCGGATATCGGACCGCTTTCTGCTCTTCTCTATGGATCGGTACTGGCACACGCGCTGCCTCAAGTGCTCCTGCTGCCAGGCTCAGCTGGGAGAGATCGGCAGCACCTGCTTCAGCAAAGGAGGGATGATCCTCTGCAGGAACGATTACATCAGGTACTAAAAGAAACAGGCAGTTGGGGGGTTTGGCGGGACTGATGTAGAAAATGCTGAGTAAGAGTGAATAAATGATGTTCTCGGCTACAGAATCAGTCTTAACATTACACAAGCAGGACAGGAAATCTGTGGATGGACTTGACTCAAACTAATAAATAATTTCTTTGTCTAGTGATATTCATCTTTATTTTATAAATTGTACACATCTATACAATCATTTAAATATTCATTAGGGGAATAAGTAAAAAAAATTGTGTTAAATATGGAGGAATTTATCCCAGAAATTTG
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations