Gene

lmo4a

ID

ZDB-GENE-010702-1

Name

LIM domain only 4a

Symbol

lmo4a Nomenclature History

Previous Names

lmo4
id:ibd2576 (1)
id:ibd5151 (1)
NH13 (1)

Type

protein_coding_gene

Location

Chr: 5 Mapping Details/Browsers

Description

Predicted to have metal ion binding activity. Involved in embryonic camera-type eye development and forebrain development. Is expressed in several structures, including brain; cardiovascular system; germ ring; mesoderm; and neural keel. Orthologous to human LMO4 (LIM domain only 4).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

21 figures from 7 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

eu232 (23 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: 7 figures from 3 publications
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With lmo4a Human Ortholog

No data available

Associated With lmo4a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001781	Zinc finger, LIM-type
Family	IPR050945	LMO/RBTN Transcription Factors

Domain Details Per Protein

Protein	Length	LMO/RBTN Transcription Factors	Zinc finger, LIM-type
UniProtKB:A0A2R8RLI6 InterPro	166
UniProtKB:Q8QG63 InterPro	167

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	lmo4a-201 (1) Ensembl	Ensembl	1,895 nt	Select Tool
mRNA	lmo4a-204 (1) Ensembl	Ensembl	501 nt	Select Tool ZFIN BLAST
ncRNA	lmo4a-002 (1) Ensembl	Ensembl	615 nt	Select Tool
ncRNA	lmo4a-003 (1) Ensembl	Ensembl	538 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations