Genomic Feature

hg40

ID
ZDB-ALT-170809-9
Name
hg40
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Sood Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 25: 37450402 - 37450435 (GRCz11) (1) Details
Nucleotide change
GCAGGCGGCTCTCGAGGGCCCAGCGGTGTTCCAG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
34 bp deleted in Exon 12 (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
Amino Acid Substitution: Gln>Pro at position 405 (1)
Sequences
Flanking Sequence
CTCTTCCGCAAGGTAAACCTGCTGTCACACACACACACACACACACACACACACACAATCCTGGGTTTTCTTCGCATGATCAGATCCGGACGTTGTTACACACAACAGGACAAAATCAAACACATCAGTCATTTGCTGGAAGACTGATCGTGTGTGTGTGTGTGTGTGTGTGTCAGCTGTGTGTGTTGTTCAGTGTGCAGTGTGTGTTGGCTCAGCTCCAGCAGGTGTTGGAGACTCATGAGGTGAACTGGCGTCTGATCCTGTGCTGTGTGTCTCATCTGCTGGTGTTCGACTCTCAGACGCAGAGCTGTCTCTCAGGTACACACACACACACACACACACACACACTCTCACGCTCCTCATGCTTTCTGTGTGTGTGTCTCTCCCTCTCATGTGTGTGTGTGTGTGTGTGTGTGTTCAGAGGTGCTGCGTGCGCTCCTCAGCTCGGCGTTCCTCCTCTTCGATGTGGAGCAGATGATCAGTGTGTTCCTGCTGGCGCG
GCAGGCGGCTCTCGAGGGCCCAGCGGTGTTCCAG/- TCCTACAGCGACTGGTTTAAGGTCGGTCACTGCACACAGAGAGTGATACTCCTGTCCCGCCCACAACCAGACCCTGTCCCCGCCCACTCCTGTTTAGAATGCCTCCGCTGCTGTAGCGCTCTCGTGTGTGTGTGTGTGTGTGTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTTCCACTCTGAGTCTTTAGGTAGCAGAGTGTGAGATTTGCTCTGTTTTACAGCAGCTGCTGAGTCCACAGTTACAGTAAATAAAGGAAACACAGGACAGCGCAGCTTTACAGTACTGAGATGATGATGATGATGATGATGATGATGATGAAGGTCTAACGCTGTTGTCCTCCATCAGCTGTCGTTTGCTGGAGCGAGCGGCGCTCACGCTA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations