Genomic Feature

ka601

ID
ZDB-ALT-170321-2
Name
ka601
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Le Noble Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 24: 21803338 (GRCz11) (1) Details
Nucleotide change
G/-
Variant Notes
the truncated protein is devoid of a functional extracellular Vegfaa binding  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
1 bp deleted in Exon 3 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
GCAGGTCATCACCCAGTACTACAGGCAGCTACAAAGTCGCTGGTAGTGTCAATGAGGCATAAGGCTGCATCTGAAATTGCATACTTCCATACTATATAGTATAGTATAGTATAGTAGTCAGTCTGAATACAAACAATTGCGGATGTAGTATGTCCAAGTTCCATTTATACTACTCTCATTCATACTGTATAGAATGTACTTTCCAACAGCCGAGTAGTACATTTAAATTCAAATGCAGTACCTACTGAGTAGTAGGCAATTTTAGAGACAGCCTGTGTTTGAATATACACCTGAAGCATCTTACCTGTGATGTAGATGTAGACAGAAGTCTGTTTGCGCTCCTTTTGCCGATACCTGCAGCGGTAGGAGCCCGTGTGCTGAGTTAAAGCAGGACTGAGTGTCAGCCGGCTGCAATACTGGTTACTTTTCTTCCCGCACTGAGTGTTCACAATATGTGTGTCGGGGTAGAGTTTTGGTACGCCTGATGGCAAAACCCACTG
G/- AGCTCCCACCGTCCCCTAAAACATCAAGTTTAGGGTAAACAAAGCGATTTGTACTTAACTGGTAAAAAAATATATGAGAGCACTAGTGAAAATGCTTCTATTTTACGAATTGGGGTGTTTGGGCTTATAGTTTGGGTCTCTTGATATGCTCAGTCCTAATGAAAAAGTGCTAGTTTGCTTTGCATTTTTTAAAGAAAAACAGGACTTGCAAAATATCTAAAACAATACTGTGTGTGTTGAGCTGAACAAGCTTTAAAGTTTATACATCTGATGGATTTTTTACAACTTCATAACAGGTAAAGTGCTTATAAAATGTGTAAATGGATTCTACTGCAAAATACTTATTTCTGACATGTATTAAACTGGCAATGTTGCATTTTTGACAAAAAAAAAACATCAGGAATGCTTGAGCATTCTGCCTTTTTTTTTGCATCCTGTGATATCATGTCATGTTTCTAATTTGTTTACATGTCTTTTATGTTCACATTTCAGTCAAACTG
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations