Genomic Feature

oz3

ID
ZDB-ALT-170112-6
Name
oz3
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one insertion (1)
Protocol
embryos treated with
Lab of Origin
Amacher Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Insertion
Variant Location
Chr 22: 22716982 - 22716983 (GRCz11) (1) Details
Nucleotide change
-/TG
Variant Notes
TALEN-induced 2 bp insertion in nr5a2, causing frameshift at AA 41 of 510,  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
2 bp inserted in Exon 3 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
AAAATCACATTATACACTAAATACATAACAAAAAAGTCCATAGGAATTTGATTTTAATAAAATAAAAACATTGTAATAATTTGGTAGGAAAAACTGAATTAAAACACATTAGATGAGTCTTTAACTAATTTGGAATCAAGTCCAGATTGTGACCCAAAAAATTTACAATACTAAAAATCATTAAAAGCAAAATTTTCATGAATGTGATGGTGCGGTTGTGCTAAATCTTACTTGGATTTGCTTCAAAATACCATTTGAATGGATGCACAACCTTCAAGGTCAACACAAGGTATTTAAAATAGTTCTCTTCTCTCTTCAAACACCAACAAATATTCTAAAACGTAAGCTTTGTTCTGTCCACAATTGTTTTTCTCCCTATCAGAACAATGCTTTTTTAGGGTGACCAGTTGAGAAGATAAAAACAGCTGATGTTACACACCTTACAGCTCTCACAGGTCAGCAACCCATAGTGATATCCGGACACCTTGTCTCCGCACACTG
-/TG GACACATCTCATCCAAGTCTTCGTCGTAGGAGTAGTCCATCATTTTAAACTGTGGGGCTAAAAACATAAGAGTATGAATACAGTGAGTAACAATTTACATTACAGAACCTATTCAATTAATTAATTTATTTTTTGACAAAAAAAATAAAAAATGGTTTGGCTGTCATGTGTTATGAGGTTCGTTTTGAAAGATTAAGAAGCAGCTAAAAAAACAAGAACTGTTTGAATCTCCACAACGAAAAGACTAAACAAATTCAGAGCTTCAATGATTGAAAAAACATCATTTTAAAGCAAATATTTCAATTGTAACCATCTCTTCGGCTAACGTCTACGTGTAGCCTGCAGTTTTTGCAGAAATAAATAAAATACGAACCACCAGTTGTTCACCAAGTCTAGCCTTAAGAGTGAATTTTCTGTAAGAATATGCAGTTTTGGGTCTCTGGGAACTTGACGAAGCTACGAGTCGGGTGTGGAGGATGGTCGCAGACAGGGTAAAACTTC
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations