Genomic Feature
sq25
- ID
- ZDB-ALT-160414-6
- Name
- sq25
- Synonyms
-
- sq25 (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- zinc finger nuclease
- Lab of Origin
- David P. Lane Lab
- Current Source
- Zebrafish International Resource Center (ZIRC) ( order this )
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 4: 23129830 - 23129834 (GRCz11) (1) Details
- Nucleotide change
- GCAGG/-
- Variant Notes
-
5 base pair deletion in exon 7 of mdm2 leading to a premature stop.
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 5 bp deleted in Exon 7 (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- None
- Flanking Sequence
-
AATATTTTCTATATACGTACATAAGTTTGTAAGCATTGAAAGTGAAATTTGCTATTTGAATGATTAATTTTATTTTTTTTAGTGCCCTCTTTGCATTGATCAACAGAAACCTTGTCACAGTGAAAAATCCAGGTACCTTAAAAACTAGTTTCGTTTGTGCTTATTTATTTATTTTTAACAATATAGTTTTATTTGTACAAGCTATCTGTATTGTATTAAAACTAGTCTGATTTCCTTTTACAGAATCACAGTCTACCTTCTCTGAACCCAGGAGTCAAAGTGAACCAGATCGAGGACCCGGGGTAAATCTTCTTTTATACTCCCATTTAGAACCACAGAGTATTGACCCATTCCACAGAGTTGCCCTGGCAGTGCTGTGTTTGTGCTTGAATGGCTTTATAGAGCCCCTGCTGTGTTTGAGATTGAAGCATGACTGAAACCCAGCTTTCTGTTCCAGGATACAGATTCAGACTCTCGCTCATCTACCTCACAACAGCAGC
GCAGG/- AGGAGGAGAAGCAGTGATCCTGGTAAGGGCACACACCAGAGAGAAAGACACACAAACGCACCAGCTGTGGCCTGTTGAGTGTGTGTGAAAGCACACGCTTGATCAACTGGGGTTTCAGATAGAGCTCTGTTTTTACATTCAGCTCTCCCTGTACAGATATTTAGAGAATGGTTTCATGTTTGTTTTTATTCCAGTGTTTACAGATTTCCTGGTTGAACAGGAAAGGGCTTGTCCATTTTTGTTGTGTTTGTGTGTATGCATTATGCACTCAGGTAGAATTTAAGAAACGTTTTAATTAATTTAATAAGTTTACTTTCAGGTGTAAAACTTAACAAAAAACCTCATGTTGCACTGGTATATTTTTGGCAAGAGCTAAAAAAAAAAAAAAAAAAAATCATTCAAAGATCAAAATTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None