Genomic Feature

s3001

ID
ZDB-ALT-150721-10
Name
s3001
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Baraban Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 5: 28973294 - 28973305 (GRCz11) (1) Details
Nucleotide change
CTCAGGATGGCA/-
Variant Notes
This allele contains a 12 bp deletion which causes a loss of the predicted  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
12 bp deleted (1)
Transcript Consequence
Start Loss (1)
Protein Consequence
None
Sequences
Flanking Sequence
GTAAAATAACGGGTTATCATACTGTAGATGGCTGTCTTACATACATATTCATTTAAATAATCCAAACGAGCAAAGCATCTCTGAATGGCCACTTAAACGCGGCAGGATAACAAGTCGATGTCTCCCTCTAGTGGGCACCAAGTGGTCTTTTCGCGCATCTTACAGGCGCACCTATTATTAAACAGATTGCAACCATTCTCACCCAAACGTCACTATTTTCATCACGTTAATTTCATATCCTATGCAAATTCGTTGAGTTCACCTTGTTAAAGCATATGCTCCAAAACCACTTCAGGCGTGAAACATGATGAAATCTGCGTAGAAAGCTGAGCTTCATAGATGCACAAATGTGTGTATGTTTACAAGACACGCTGCATATGTCAACAAAGGAGCTGCGGAGGCGTGTGCTGGGATTAGCCATCGACGCAAGAGCCACATCCCATTTACACCAACTGTAGATCCGAGCGCGCGCACTCCGAGTCCGGCGGCGAGAGCGAGCA
CTCAGGATGGCA/- TCTCTGGGACTCAAGGCGATTGTCGGAGAAAGTAAGACATGTTTTCCTTAAGTTTATGTATGGCAGATATACGGCTGTTTTTGGACCGGACATGTTGAAAATTTGTAACGTGTGGAGTTAGTGCCATTTTCATTGACATTTGTACTTTGTGTAGTACTGTACATGTTAGCATGAAGGGTGTGTTAATGTATTATCAAATATTAGTTGGCCCATACTCACAAACAGTAGCCTATAAACCTCATACAACAATACAGCTCTACTTAAATTCTTATATTGAAATTGCTTAATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATAATGAGTGTCAGGCGCTACACATTACATAGAATAACTGATATTGCTAAAAGCACACAAGCATTTGAGATAGGCTACACACTAATCTGTGTAGTCCTGTGGGATTAGGGATCCAGATATGAGGGGCGGCTCATAGTCC
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations