Genomic Feature
hg10
- ID
- ZDB-ALT-130531-1
- Name
- hg10
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with zinc finger nuclease
- Lab of Origin
- P. Paul Liu Lab
- Current Source
- Zebrafish International Resource Center (ZIRC) ( order this )
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 18: 22996853 - 22996856 (GRCz11) (1) Details
- Nucleotide change
- ACCT/-
- Variant Notes
-
4bp deletion in exon 3, cDNA: 215delACCT, p:N72IfsX25
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 4 bp deleted at position 215 in Exon 3 (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- None
- Flanking Sequence
-
GAATGTTATTGAATTATAGAACCATAATTCAAAACCTTTACAGCAGTCCAGCTGCTATTAAAGTAAGTGAGGGTCTGAATTTAAAACAATTATTGATTTTGTACTCGTCTCGGTCTCTGTTATCTCTCTGTCACTCATTCACTCCTGCGTTCTGTCTCCTCTCAAACTCAGTTTGGCGCAGCCCGCTTTGCCAGCATTGAGCGTTGGTAAAATAGAATCAGATGTGTGTAACTCAATACCTCAAATAGGGAAAATGATGACTTGTGTTTTTTTCTCTCTTTGCGTTGCGCACCCCCCTCCCCCCTCCCTTCTTTTCCTGATGTTTTGAGCGCTGGCCTTGGCTCCAGGCATTCTCTTCTTCTCTCTGATGTGAAAACAGAAATGACGGGCTGCATAATTTATGCTCGGGCCTGGCTTTCTTATCCTGTTTGTATTGATTTCCCTCTAAAAGGCTTTTGTGGCGACCGGCACCAACCTCTCGCTGCAGTTCTTCCCAGCCA
ACCT/- TCATGGGGATCAGCGGCAGGCGCCCACCCGAGAATATGTGGACTTCGAGCGGGAGACGGGAAAGGTAGTCCTGACACTCTTTCTTTGACTGTATTTGCAATTATTCCTGTTTAAACTCTAACTCACGCCCCCTCATCTCCCTTAAAATATAAATCAGCTCATAATGTACACACACTCAAACCATTAATACATGCTAAACTTTTTGTAAGTAAAAAAAGCCACATGCATGATTTATGAAATCTGAGGAATGATTGAAGAAGTCATTTCTGTTTCTCTTTCGTCTTTTCCTTCCTGCAAAGGAAGTGTGTCACTTTTTCAAACCAGACGTATCCATGGTTTAGACAGGCAAAAGCCTTGATTTTCCATAATGATACGTTTCTCTCTCACACATCTCAAGGAAAAACGAACCCTTGAAATATTACACTGCAGACAGCAAGAAAAACAGTCTCTCTTGAATGAAACATGGCATGGCTTTCCATTTTATGTTTAAACATTGGATT - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None