Genomic Feature

hu888

ID
ZDB-ALT-100504-7
Name
hu888
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one point mutation (1)
Protocol
adult males treated with ENU
Lab of Origin
Cuppen Lab
Current Source
European Zebrafish Resource Center (EZRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Point Mutation
Variant Location
Chr 5: 24093772 (GRCz11) (1) Details
Nucleotide change
G/T
Variant Notes
Piasecka et al (2015): mutation at position 25762707 of the chromosome5  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
G>T at position 25762707 in GenBank:NC_007116 in Acceptor Splice Site of Intron 8 (1)
Transcript Consequence
Splice Site (1)
Protein Consequence
Amino Acid Deletion: 4 AA missing from position 278 to 281 (1)
Sequences
Flanking Sequence
GTCATATGTTGTATTTCCTGTGTGATGTCGCAGGCCAGACATTTGCCTTCTGCAGGCTGGCACTCTTCTGGACTGAATGAAGATAGATCTTCCTCTATATCAGCATCTGCTACAACTTTTTTGGCACTGTTACTCATGTTAAGTGATTTTGCTGTAAACAAAACGGTTCCTGGAGTTCAAAACATCTCTCGTGATTTAACATACCAATCAATTGGACTCATCTCGCATTTGAATCCATTTTCATCTGGCTCATGCTCAATTGTTACATCCTGCTTTTTTGTCCCACAGAGGTCAGTTGCTGGGCCGGAGGTCTTTTGAGGTGCGTGTGTGTGCATGTCCAGGCAGAGACAGGAAAACTGAGGAGAGCAACTTCAAGAAAGACCAAGAGACCAAAACCATGGCCAAAACCACCACTGGGACCAAACGTAGTAAGTTTGCTGCTACACTGCTGAAAAATATTTTGCCTTATAATAGGAGGGTAATGTGAATCTAACCTGGCA
G/T GTTTGGTGAAAGAATCTTCTTCAGCTACATTACGACCTGAGGGGAGCAAAAAGGCCAAGGGCTCCAGCAGCGATGAGGAGATCTTTACCCTGCAGGTGATTGTCTTATTAATACTATTTTTTAAAACGGTTTAGCAACAAATATGTGTTTAGCCACACATTATTTAAATGCTTTTAAATTTGTTTTGAATAAAATTTATTTGCAGTTTAGACTAGAGCTGCACAATTAATCGAAAAAAAGATCACAATCTCGATTCAGCCCCCTAGGCGATCTTGATCCAGCATTTCTACGATTCTGTCAATAATATTTTCAAGTTCAGGAGAAAAGCAAAGGCCGCACAAGTCTTCATTGTTTTACGTACGTTGTTCAGCAACGTGGACACCCCCAAATGGGTTTGAAAGAGTCACATGCTGTATTTATAAGATATAATCACCTCAATAACCTCAAATATGTAGTTTCTGTCTATATGTAATGATGTATTCACGGCCGCAAAATCACAT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations