Transcript

prom1a-204

ID
ZDB-TSCRIPT-141209-3160
Name
prom1a-204 Nomenclature History
Previous Names
  • prom1a-007
  • proml1-007
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000158144 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000158144.2|gene_biotype:protein_coding|ENSDARG00000039966.7 transcript_biotype:nonsense_mediated_decay gene_symbol:prom1a cdna chromosome:GRCz11:14:46459117:46616488:-1
TAGCGGAGCATCAGACTGACTGACCGGCGGACAGACACCG
AGCCCCGCCGTGAACCTGCAGGAGAAGCCGCTCTCCTGGG
GGAGCATGATCATCATGACTCGCTCGCCGGACAGCAGGAC
TTGAGACCTGCGGTTTGTCAGTGATTGTGTCTTACTGAAC
ACCCAGAATTTCCTCCACTTCCATCATCTGGATTTGCTTC
AACACTAGAACTAATCATGCTTTGGAAAACGGCACTGATT
TTTCTGTGCTGGGGCTTGACGTCCGGGGAGCTACAGAACG
GGCTGTCCGCCACTCCTGCTGCTCCAGCGCGGAGAACTTT
GGATTTCGGCTTCGTCCCCTCCGGAGTTTACGATACTGTT
GCCTATTATGAGCCTGGAGCCATTGGGATTTTATTTAACA
TGATGCACGCTTTCCTCTTTGTGGTTCAGCCCAACCCGTT
TCCTGAAGATCTCGTCATTAGCGCGGCAAAGGATAAATTT
GGAGCCATACAGTCCGAGTACCAGAAGGTAATATATTATG
AGCTTGGGTTTGTGGTGTGTGCGGCGCTGGGCCTGCTGTT
CACCGTGCTGCTGCCGCTGGTCGGGCTTCTCTTCTGTTTG
TGCCGCTGCTGTGATAACTGTGGAGGAGAGATGCACCAGA
GACAGAGGAAGAACGCAGACTGCCTTCGAGGACTGCTGAC
CACACTCTTACTCACCACCACCTTCATCATCACGGCTGGG
GTCCTTTGTGCTTATGCAGCCAATCAGAACCTGAGTTCGC
AGCTGAAGGGCATGAGGAGGCTGGTGAAGAGTAACCTGAA
AGACCTGCACACCTTCGCCAATCAGACGCCTGCACAAATT
GATTACCTGATCTCTCGCTACGGCACCGTGAAGGAGCAGG
TGCTGCATGATCTGGAGAATGTAGGTGTGATCTTGGGGGG
AAGGATACATGAGGAGCTGGGCAAAGAGGTGAAGCCTGCT
CTCGATGCCACTCTCAGCATGACCGGAACAATGCGAGACA
CTAAGGACGCTCTAGAGAATGTGAGTCTGACCTTGGAGAC
TCTGCAGGAAGGAACAGTCAAACTGCAGGCAAACCTGAGT
GTGGTGCGCAACAGCCTGAGAAACGCCCTGAACGATCCCG
TCTGTGTGGATGCTCCAGCACCGGAGATCTGTCGAAACAT
ACGCAACTCCATTCCCAAGCTCGAAATCGCAGCCAACTAC
TCATCGTTGCCTGATGTGACCGACCAGTTAAATAAGGTGA
ATGACGTTCTGAAGACGGATCTCAGTCAGATTGTGGCAAA
GGGGATTGCATCTTTTAATGACACTCCTGCTATGGTAACC
GCTCAAACTCGAAATATTGTTGAAGGGGTGAAGGTGTTGC
TTGATGACATTGGAAATAACATCACCTCTTTCAGCAAGAT
GTTGCCAGTTCACAGCTCTCTGGCCAACTTCACCAGAATG
ATCTCTCACACACACTCGCAGATCGAGGACATCTACCCGC
AGATTGATCAGATGGATTTCTACAGGTGGATCGGTTGCAT
TACCCTGTGCTGTATGATTGTGCTCATCCTCACCTTCAAT
TTTCTGGGTCTGTTGTGTGGTATTCTGGGATTCGACAGAC
ACGCTTCCCCAACCACACGTGGCTGTGTCTCCAACACAGG
AGGGAACTTTCTCATGGCCGGTGTGGGCTTCAGCTTCCTG
TTCTCCTGGGTGCTCATGGGAGTCATAACAGCTTTGTTCC
TGGCAGGAGGCAATCTGGAGAAGCTCGTGTGTGAGCCCTT
CCAAACACGACAGCTCTTCAAGGTGTTAGATACTCCATAC
CTGGTCAACTCTGCTTGGAGAAACTTTATACCAGGATACC
TGTACAATGACCCAGAGATGGACCTTACAGCATATTCTCT
CTACAGTAACTGTAAGGACAACAGAGGGATTTACTCAGCT
CTTCATCTGGACAGAATCTTCAACATCTCATCCTTCTTTA
ACACCAGTGTTTACTCCAAGGATGTGTCCAGGAAGTTTGA
AGGACTGAAGGTGGATTTACGGGGCATCATTCTTCTTGAG
TCTGAAGGCAAAGTCAACCTCAACAACTTCTCTGAAACTG
GCATTAATGAGATCGACTTTGCTGCCTATTTAGAGGAGGT
TAATAAAGGAGTGACTCGAATAGATCTCATTGATTTCGCC
AATCAACTCGATGCTCAAGCTGATCAGTTGTCTAAAGGGA
CGTTACAGACTTCATTAAAGGGACATGCGAACACTATAAG
GCAGATCCACATCCAACAAGTCGTCCCACTGGAGCAGTCC
ATGAGCACACTTAATCAGAGCATCAGACTTCTGGAAAGGA
CGTCCTCAGATCTGCCTCTCCGAGTTGAAGATGTTCTTAA
AGCCGTTGATGATGCCCAGAACCTGATTTCCTACAATGCA
ACATTTGTGATCAATCAGGAAACTGAGAAATACAAGCAGA
ACATCATTGGCTATTTTAAGCAGTACATAGACTGGATCAG
GACATCTCTGGCTCTGGAGGTCGCCACCTGTAAACCACTC
AGCAACATTGTGGACACGGTGGAGATCCTGGGCTGCGGTT
TCTTGCTGGATTCAATGAACACTTTCTGGTTTGGACTGGG
CTGCTGCACACTCTTTCTGCTCCCTAGCATTATCCTGTCT
GTCAAGCTCGCCAAGTTTTACCGCAGAATGGACACAGAGG
ATGTTTATGACGACATTGAGACATTTCCCATGAAAACCAT
CCCTACCTATGACACTATGACCCGCTTCCCACGGGCCTCT
GCGCCCCCGCGCCACGCCGACTGGTGACTCTCAGGACCAC
CATCTGCTTTTAACTACTGAAAGCGATATTGGACACTGGA
ATTGAATCTTTGTGGAATACTCTCCATGTTGAACAGCAGG
CTCAGCTCAGACTGACGACATTAAGAAAAGGAAACTCACA
TACTTGAAGCTGGGACCTGTTGTCTGTGTTTCTCCATAAC
ACCAATCGAGACTTTCTTTAAAATGTCTTGTTGTTTTTGA
CTGTTTTGCACGTTAATCATTATTAGTACTGTCCCTCAAC
GAGCTCTGACA

OTTDART00000060606 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000060606|OTTDARG00000021335|ZDB-GENE-030131-1577 prom1a|OTTDARP00000046839 proml1-007 LG_none BX004823.23,BX088536.8 Danio rerio protein_coding KNOWN, 3051 bp
TAGCGGAGCATCAGACTGACTGACCGGCGGACAGACACCG
AGCCCCGCCGTGAACCTGCAGGAGAAGCCGCTCTCCTGGG
GGAGCATGATCATCATGACTCGCTCGCCGGACAGCAGGAC
TTGAGACCTGCGGTTTGTCAGTGATTGTGTCTTACTGAAC
ACCCAGAATTTCCTCCACTTCCATCATCTGGATTTGCTTC
AACACTAGAACTAATCATGCTTTGGAAAACGGCACTGATT
TTTCTGTGCTGGGGCTTGACGTCCGGGGAGCTACAGAACG
GGCTGTCCGCCACTCCTGCTGCTCCAGCGCGGAGAACTTT
GGATTTCGGCTTCGTCCCCTCCGGAGTTTACGATACTGTT
GCCTATTATGAGCCTGGAGCCATTGGGATTTTATTTAACA
TGATGCACGCTTTCCTCTTTGTGGTTCAGCCCAACCCGTT
TCCTGAAGATCTCGTCATTAGCGCGGCAAAGGATAAATTT
GGAGCCATACAGTCCGAGTACCAGAAGGTAATATATTATG
AGCTTGGGTTTGTGGTGTGTGCGGCGCTGGGCCTGCTGTT
CACCGTGCTGCTGCCGCTGGTCGGGCTTCTCTTCTGTTTG
TGCCGCTGCTGTGATAACTGTGGAGGAGAGATGCACCAGA
GACAGAGGAAGAACGCAGACTGCCTTCGAGGACTGCTGAC
CACACTCTTACTCACCACCACCTTCATCATCACGGCTGGG
GTCCTTTGTGCTTATGCAGCCAATCAGAACCTGAGTTCGC
AGCTGAAGGGCATGAGGAGGCTGGTGAAGAGTAACCTGAA
AGACCTGCACACCTTCGCCAATCAGACGCCTGCACAAATT
GATTACCTGATCTCTCGCTACGGCACCGTGAAGGAGCAGG
TGCTGCATGATCTGGAGAATGTAGGTGTGATCTTGGGGGG
AAGGATACATGAGGAGCTGGGCAAAGAGGTGAAGCCTGCT
CTCGATGCCACTCTCAGCATGACCGGAACAATGCGAGACA
CTAAGGACGCTCTAGAGAATGTGAGTCTGACCTTGGAGAC
TCTGCAGGAAGGAACAGTCAAACTGCAGGCAAACCTGAGT
GTGGTGCGCAACAGCCTGAGAAACGCCCTGAACGATCCCG
TCTGTGTGGATGCTCCAGCACCGGAGATCTGTCGAAACAT
ACGCAACTCCATTCCCAAGCTCGAAATCGCAGCCAACTAC
TCATCGTTGCCTGATGTGACCGACCAGTTAAATAAGGTGA
ATGACGTTCTGAAGACGGATCTCAGTCAGATTGTGGCAAA
GGGGATTGCATCTTTTAATGACACTCCTGCTATGGTAACC
GCTCAAACTCGAAATATTGTTGAAGGGGTGAAGGTGTTGC
TTGATGACATTGGAAATAACATCACCTCTTTCAGCAAGAT
GTTGCCAGTTCACAGCTCTCTGGCCAACTTCACCAGAATG
ATCTCTCACACACACTCGCAGATCGAGGACATCTACCCGC
AGATTGATCAGATGGATTTCTACAGGTGGATCGGTTGCAT
TACCCTGTGCTGTATGATTGTGCTCATCCTCACCTTCAAT
TTTCTGGGTCTGTTGTGTGGTATTCTGGGATTCGACAGAC
ACGCTTCCCCAACCACACGTGGCTGTGTCTCCAACACAGG
AGGGAACTTTCTCATGGCCGGTGTGGGCTTCAGCTTCCTG
TTCTCCTGGGTGCTCATGGGAGTCATAACAGCTTTGTTCC
TGGCAGGAGGCAATCTGGAGAAGCTCGTGTGTGAGCCCTT
CCAAACACGACAGCTCTTCAAGGTGTTAGATACTCCATAC
CTGGTCAACTCTGCTTGGAGAAACTTTATACCAGGATACC
TGTACAATGACCCAGAGATGGACCTTACAGCATATTCTCT
CTACAGTAACTGTAAGGACAACAGAGGGATTTACTCAGCT
CTTCATCTGGACAGAATCTTCAACATCTCATCCTTCTTTA
ACACCAGTGTTTACTCCAAGGATGTGTCCAGGAAGTTTGA
AGGACTGAAGGTGGATTTACGGGGCATCATTCTTCTTGAG
TCTGAAGGCAAAGTCAACCTCAACAACTTCTCTGAAACTG
GCATTAATGAGATCGACTTTGCTGCCTATTTAGAGGAGGT
TAATAAAGGAGTGACTCGAATAGATCTCATTGATTTCGCC
AATCAACTCGATGCTCAAGCTGATCAGTTGTCTAAAGGGA
CGTTACAGACTTCATTAAAGGGACATGCGAACACTATAAG
GCAGATCCACATCCAACAAGTCGTCCCACTGGAGCAGTCC
ATGAGCACACTTAATCAGAGCATCAGACTTCTGGAAAGGA
CGTCCTCAGATCTGCCTCTCCGAGTTGAAGATGTTCTTAA
AGCCGTTGATGATGCCCAGAACCTGATTTCCTACAATGCA
ACATTTGTGATCAATCAGGAAACTGAGAAATACAAGCAGA
ACATCATTGGCTATTTTAAGCAGTACATAGACTGGATCAG
GACATCTCTGGCTCTGGAGGTCGCCACCTGTAAACCACTC
AGCAACATTGTGGACACGGTGGAGATCCTGGGCTGCGGTT
TCTTGCTGGATTCAATGAACACTTTCTGGTTTGGACTGGG
CTGCTGCACACTCTTTCTGCTCCCTAGCATTATCCTGTCT
GTCAAGCTCGCCAAGTTTTACCGCAGAATGGACACAGAGG
ATGTTTATGACGACATTGAGACATTTCCCATGAAAACCAT
CCCTACCTATGACACTATGACCCGCTTCCCACGGGCCTCT
GCGCCCCCGCGCCACGCCGACTGGTGACTCTCAGGACCAC
CATCTGCTTTTAACTACTGAAAGCGATATTGGACACTGGA
ATTGAATCTTTGTGGAATACTCTCCATGTTGAACAGCAGG
CTCAGCTCAGACTGACGACATTAAGAAAAGGAAACTCACA
TACTTGAAGCTGGGACCTGTTGTCTGTGTTTCTCCATAAC
ACCAATCGAGACTTTCTTTAAAATGTCTTGTTGTTTTTGA
CTGTTTTGCACGTTAATCATTATTAGTACTGTCCCTCAAC
GAGCTCTGACA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations