Transcript

prom1a-208

ID
ZDB-TSCRIPT-141209-1940
Name
prom1a-208 Nomenclature History
Previous Names
  • prom1a-006
  • proml1-006
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000171476 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000171476.2|gene_biotype:protein_coding|ENSDARG00000039966.7 transcript_biotype:nonsense_mediated_decay gene_symbol:prom1a cdna chromosome:GRCz11:14:46459117:46616488:-1
TAGCGGAGCATCAGACTGACTGACCGGCGGACAGACACCG
AGCCCCGCCGTGAACCTGCAGGAGAAGCCGCTCTCCTGGG
GGAGCATGATCATCATGACTCGCTCGCCGGACAGCAGGAC
TTGAGACCTGCGGTTTGTCAGTGATTGTGTCTTACTGAAC
ACCCAGAATTTCCTCCACTTCCATCATCTGGATTTGCTTC
AACACTAGAACTAATCATGCTTTGGAAAACGGCACTGATT
TTTCTGTGCTGGGGCTTGACGTCCGGGGAGCTACAGAACG
GGCTGTCCGCCACTCCTGCTGCTCCAGCGCGGAGAACTTT
GGATTTCGGCTTCGTCCCCTCCGGAGTTTACGATACTGTT
GCCTATTATGAGCCTGGAGCCATTGGGATTTTATTTAACA
TGATGCACGCTTTCCTCTTTGTGGTTCAGCCCAACCCGTT
TCCTGAAGATCTCGTCATTAGCGCGGCAAAGGATAAATTT
GGAGCCATACAGTCCGAGTACCAGAAGGTAATATATTATG
AGCTTGGGTTTGTGGTGTGTGCGGCGCTGGGCCTGCTGTT
CACCGTGCTGCTGCCGCTGGTCGGGCTTCTCTTCTGTTTG
TGCCGCTGCTGTGATAACTGTGGAGGAGAGATGCACCAGA
GACAGAGGAAGAACGCAGACTGCCTTCGAGGACTGCTGAC
CACACTCTTACTCACCACCACCTTCATCATCACGGCTGGG
GTCCTTTGTGCTTATGCAGCCAATCAGAACCTGAGTTCGC
AGCTGAAGGGCATGAGGAGGCTGGTGAAGAGTAACCTGAA
AGACCTGCACACCTTCGCCAATCAGACGCCTGCACAAATT
GATTACCTGATCTCTCGCTACGGCACCGTGAAGGAGCAGG
TGCTGCATGATCTGGAGAATGTAGGTGTGATCTTGGGGGG
AAGGATACATGAGGAGCTGGGCAAAGAGGTGAAGCCTGCT
CTCGATGCCACTCTCAGCATGACCGGAACAATGCGAGACA
CTAAGGACGCTCTAGAGAATGTGAGTCTGACCTTGGAGAC
TCTGCAGGAAGGAACAGTCAAACTGCAGGCAAACCTGAGT
GTGGTGCGCAACAGCCTGAGAAACGCCCTGAACGATCCCG
TCTGTGTGGATGCTCCAGCACCGGAGATCTGTCGAAACAT
ACGCAACTCCATTCCCAAGCTCGAAATCGCAGCCAACTAC
TCATCGTTGCCTGATGTGACCGACCAGTTAAATAAGGTGA
ATGACGTTCTGAAGACGGATCTCAGTCAGATTGTGGCAAA
GGGGATTGCATCTTTTAATGACACTCCTGCTATGGTAACC
GCTCAAACTCGAAATATTGTTGAAGGGGTGAAGGTGTTGC
TTGATGACATTGGAAATAACATCACCTCTTTCAGCAAGAT
GTTGCCAGTTCACAGCTCTCTGGCCAACTTCACCAGAATG
ATCTCTCACACACACTCGCAGATCGAGGACATCTACCCGC
AGATTGATCAGATGGATTTCTACAGGTGGATCGGTTGCAT
TACCCTGTGCTGTATGATTGTGCTCATCCTCACCTTCAAT
TTTCTGGGTCTGTTGTGTGGTATTCTGGGATTCGACAGAC
ACGCTTCCCCAACCACACGTGGCTGTGTCTCCAACACAGG
AGGGAACTTTCTCATGGCCGGTGTGGGCTTCAGCTTCCTG
TTCTCCTGGGTGCTCATGGGAGTCATAACAGCTTTGTTCC
TGGCAGGAGGCAATCTGGAGAAGCTCGTGTGTGAGCCCTT
CCAAACACGACAGCTCTTCAAGGTGTTAGATACTCCATAC
CTGGTCAACTCTGCTTGGAGAAACTTTATACCAGGATACC
TGTACAATGACCCAGAGATGGACCTTACAGCATATTCTCT
CTACAGTAACTGTAAGGACAACAGAGGGATTTACTCAGCT
CTTCATCTGGACAGAATCTTCAACATCTCATCCTTCTTTA
ACACCAGTGTTTACTCCAAGGATGTGTCCAGGAAGTTTGA
AGGACTGAAGGTGGATTTACGGGGCATCATTCTTCTTGAG
TCTGAAGGCAAAGTCAACCTCAACAACTTCTCTGAAACTG
GCATTAATGAGATCGACTTTGCTGCCTATTTAGAGGAGGT
TAATAAAGGAGTGACTCGAATAGATCTCATTGATTTCGCC
AATCAACTCGATGCTCAAGCTGATCAGTTGTCTAAAGGGA
CGTTACAGACTTCATTAAAGGGACATGCGAACACTATAAG
GCAGATCCACATCCAACAAGTCGTCCCACTGGAGCAGTCC
ATGAAATATGTGAAAGCGAGGAGCACACTTAATCAGAGCA
TCAGACTTCTGGAAAGGACGTCCTCAGATCTGCCTCTCCG
AGTTGAAGATGTTCTTAAAGCCGTTGATGATGCCCAGAAC
CTGATTTCCTACAATGCAACATTTGTGATCAATCAGGAAA
CTGAGAAATACAAGCAGAACATCATTGGCTATTTTAAGCA
GTACATAGACTGGATCAGGACATCTCTGGCTCTGGAGGTC
GCCACCTGTAAACCACTCAGCAACATTGTGGACACGGTGG
AGATCCTGGGCTGCGGTTTCTTGCTGGATTCAATGAACAC
TTTCTGGTTTGGACTGGGCTGCTGCACACTCTTTCTGCTC
CCTAGCATTATCCTGTCTGTCAAGCTCGCCAAGTTTTACC
GCAGAATGGACACAGAGGATGTTTATGACGACATTGAGAC
ATTTCCCATGAAAACCATCCCTACCTATGACACTATGACC
CGCTTCCCACGGGCCTCTGCGCCCCCGCGCCACGCCGACT
GGTGACTCTCAGGACCACCATCTGCTTTTAACTACTGAAA
GCGATATTGGACACTGGAATTGAATCTTTGTGGAATACTC
TCCATGTTGAACAGCAGGCTCAGCTCAGACTGACGACATT
AAGAAAAGGAAACTCACATACTTGAAGCTGGGACCTGTTG
TCTGTGTTTCTCCATAACACCAATCGAGACTTTCTTTAAA
ATGTCTTGTTGTTTTTGACTGTTTTGCACGTTAATCATTA
TTAGTACTGTCCCTCAACGAGCTCTGACA

OTTDART00000060605 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000060605|OTTDARG00000021335|ZDB-GENE-030131-1577 prom1a|OTTDARP00000046838 proml1-006 LG_none BX004823.23,BX088536.8 Danio rerio protein_coding KNOWN, 3069 bp
TAGCGGAGCATCAGACTGACTGACCGGCGGACAGACACCG
AGCCCCGCCGTGAACCTGCAGGAGAAGCCGCTCTCCTGGG
GGAGCATGATCATCATGACTCGCTCGCCGGACAGCAGGAC
TTGAGACCTGCGGTTTGTCAGTGATTGTGTCTTACTGAAC
ACCCAGAATTTCCTCCACTTCCATCATCTGGATTTGCTTC
AACACTAGAACTAATCATGCTTTGGAAAACGGCACTGATT
TTTCTGTGCTGGGGCTTGACGTCCGGGGAGCTACAGAACG
GGCTGTCCGCCACTCCTGCTGCTCCAGCGCGGAGAACTTT
GGATTTCGGCTTCGTCCCCTCCGGAGTTTACGATACTGTT
GCCTATTATGAGCCTGGAGCCATTGGGATTTTATTTAACA
TGATGCACGCTTTCCTCTTTGTGGTTCAGCCCAACCCGTT
TCCTGAAGATCTCGTCATTAGCGCGGCAAAGGATAAATTT
GGAGCCATACAGTCCGAGTACCAGAAGGTAATATATTATG
AGCTTGGGTTTGTGGTGTGTGCGGCGCTGGGCCTGCTGTT
CACCGTGCTGCTGCCGCTGGTCGGGCTTCTCTTCTGTTTG
TGCCGCTGCTGTGATAACTGTGGAGGAGAGATGCACCAGA
GACAGAGGAAGAACGCAGACTGCCTTCGAGGACTGCTGAC
CACACTCTTACTCACCACCACCTTCATCATCACGGCTGGG
GTCCTTTGTGCTTATGCAGCCAATCAGAACCTGAGTTCGC
AGCTGAAGGGCATGAGGAGGCTGGTGAAGAGTAACCTGAA
AGACCTGCACACCTTCGCCAATCAGACGCCTGCACAAATT
GATTACCTGATCTCTCGCTACGGCACCGTGAAGGAGCAGG
TGCTGCATGATCTGGAGAATGTAGGTGTGATCTTGGGGGG
AAGGATACATGAGGAGCTGGGCAAAGAGGTGAAGCCTGCT
CTCGATGCCACTCTCAGCATGACCGGAACAATGCGAGACA
CTAAGGACGCTCTAGAGAATGTGAGTCTGACCTTGGAGAC
TCTGCAGGAAGGAACAGTCAAACTGCAGGCAAACCTGAGT
GTGGTGCGCAACAGCCTGAGAAACGCCCTGAACGATCCCG
TCTGTGTGGATGCTCCAGCACCGGAGATCTGTCGAAACAT
ACGCAACTCCATTCCCAAGCTCGAAATCGCAGCCAACTAC
TCATCGTTGCCTGATGTGACCGACCAGTTAAATAAGGTGA
ATGACGTTCTGAAGACGGATCTCAGTCAGATTGTGGCAAA
GGGGATTGCATCTTTTAATGACACTCCTGCTATGGTAACC
GCTCAAACTCGAAATATTGTTGAAGGGGTGAAGGTGTTGC
TTGATGACATTGGAAATAACATCACCTCTTTCAGCAAGAT
GTTGCCAGTTCACAGCTCTCTGGCCAACTTCACCAGAATG
ATCTCTCACACACACTCGCAGATCGAGGACATCTACCCGC
AGATTGATCAGATGGATTTCTACAGGTGGATCGGTTGCAT
TACCCTGTGCTGTATGATTGTGCTCATCCTCACCTTCAAT
TTTCTGGGTCTGTTGTGTGGTATTCTGGGATTCGACAGAC
ACGCTTCCCCAACCACACGTGGCTGTGTCTCCAACACAGG
AGGGAACTTTCTCATGGCCGGTGTGGGCTTCAGCTTCCTG
TTCTCCTGGGTGCTCATGGGAGTCATAACAGCTTTGTTCC
TGGCAGGAGGCAATCTGGAGAAGCTCGTGTGTGAGCCCTT
CCAAACACGACAGCTCTTCAAGGTGTTAGATACTCCATAC
CTGGTCAACTCTGCTTGGAGAAACTTTATACCAGGATACC
TGTACAATGACCCAGAGATGGACCTTACAGCATATTCTCT
CTACAGTAACTGTAAGGACAACAGAGGGATTTACTCAGCT
CTTCATCTGGACAGAATCTTCAACATCTCATCCTTCTTTA
ACACCAGTGTTTACTCCAAGGATGTGTCCAGGAAGTTTGA
AGGACTGAAGGTGGATTTACGGGGCATCATTCTTCTTGAG
TCTGAAGGCAAAGTCAACCTCAACAACTTCTCTGAAACTG
GCATTAATGAGATCGACTTTGCTGCCTATTTAGAGGAGGT
TAATAAAGGAGTGACTCGAATAGATCTCATTGATTTCGCC
AATCAACTCGATGCTCAAGCTGATCAGTTGTCTAAAGGGA
CGTTACAGACTTCATTAAAGGGACATGCGAACACTATAAG
GCAGATCCACATCCAACAAGTCGTCCCACTGGAGCAGTCC
ATGAAATATGTGAAAGCGAGGAGCACACTTAATCAGAGCA
TCAGACTTCTGGAAAGGACGTCCTCAGATCTGCCTCTCCG
AGTTGAAGATGTTCTTAAAGCCGTTGATGATGCCCAGAAC
CTGATTTCCTACAATGCAACATTTGTGATCAATCAGGAAA
CTGAGAAATACAAGCAGAACATCATTGGCTATTTTAAGCA
GTACATAGACTGGATCAGGACATCTCTGGCTCTGGAGGTC
GCCACCTGTAAACCACTCAGCAACATTGTGGACACGGTGG
AGATCCTGGGCTGCGGTTTCTTGCTGGATTCAATGAACAC
TTTCTGGTTTGGACTGGGCTGCTGCACACTCTTTCTGCTC
CCTAGCATTATCCTGTCTGTCAAGCTCGCCAAGTTTTACC
GCAGAATGGACACAGAGGATGTTTATGACGACATTGAGAC
ATTTCCCATGAAAACCATCCCTACCTATGACACTATGACC
CGCTTCCCACGGGCCTCTGCGCCCCCGCGCCACGCCGACT
GGTGACTCTCAGGACCACCATCTGCTTTTAACTACTGAAA
GCGATATTGGACACTGGAATTGAATCTTTGTGGAATACTC
TCCATGTTGAACAGCAGGCTCAGCTCAGACTGACGACATT
AAGAAAAGGAAACTCACATACTTGAAGCTGGGACCTGTTG
TCTGTGTTTCTCCATAACACCAATCGAGACTTTCTTTAAA
ATGTCTTGTTGTTTTTGACTGTTTTGCACGTTAATCATTA
TTAGTACTGTCCCTCAACGAGCTCTGACA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations