Transcript

tdo2a-005

ID

ZDB-TSCRIPT-110912-298

Name

tdo2a-005 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

tdo2a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000150729 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000150729.2|gene_biotype:protein_coding|ENSDARG00000071429.8 transcript_biotype:retained_intron gene_symbol:tdo2a cdna chromosome:GRCz11:14:36749257:36750327:1
TTTCCATTGAACCATGCCTTTATATTCTATACTGTACATT
ATTTCTGTTAGTGACAAGACTTTTGTCGAAACAAAGTCAG
ACATTACTGTCTTAATCAAATAATTAAAAATCAAGGGATG
ATCATATTTTATTTTGTTAAAATAAGCGTAATCTAGAGGT
CTTTGCATTTCATATAGGCAACGTCTGATACCTAATGATC
AACTAGAAGTTATTATTTGTTGTTTCTAAAACTTGGATAG
ACGACAAGCCTGGTATCATGCTACTTCTTGATATACATAA
TATATAATGGTGTCTACATAACACTCTAAGAATACCATGT
ATGACTATCTAAAGAAATGCTTTGATCACCATCTGCTTTC
AGGGAGGAGCCTCGATTTCAGGTTCCTTTCCAGCTGCTGA
CGTCTCTGATGGACATCGACACCCTCATGACCAAATGGAG
ATACAACCATGTGTGTATGGTGCACCGGATGATTGGCAGT
AAAGACGGCACAGGTGGCTCATCGGGCTATCAGTACCTGC
GCTCCACTGTCAGTGATCGCTACAAGGTGTTTGTGGATCT
GTTTAACCTGGCCACGTTCTTGATTCCGCGAGACTGGGTG
CCCAAACTGGACCCAAGTGAACACACCTTCCTGTACATGG
CTGAATGTTGCGACAGCTCCTACTGCAGCAGCAGTGATGA
TTCTGACTGAACAGATGGAGGAATGAGGAGAAGATGGACA

OTTDART00000029278 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000029278|OTTDARG00000028044|ZDB-GENE-030131-1187 tdo2a|no_translation tdo2a-005 LG_ CR931784.8 Danio rerio protein_coding KNOWN, 720 bp
TTTCCATTGAACCATGCCTTTATATTCTATACTGTACATT
ATTTCTGTTAGTGACAAGACTTTTGTCGAAACAAAGTCAG
ACATTACTGTCTTAATCAAATAATTAAAAATCAAGGGATG
ATCATATTTTATTTTGTTAAAATAAGCGTAATCTAGAGGT
CTTTGCATTTCATATAGGCAACGTCTGATACCTAATGATC
AACTAGAAGTTATTATTTGTTGTTTCTAAAACTTGGATAG
ACGACAAGCCTGGTATCATGCTACTTCTTGATATACATAA
TATATAATGGTGTCTACATAACACTCTAAGAATACCATGT
ATGACTATCTAAAGAAATGCTTTGATCACCATCTGCTTTC
AGGGAGGAGCCTCGATTTCAGGTTCCTTTCCAGCTGCTGA
CGTCTCTGATGGACATCGACACCCTCATGACCAAATGGAG
ATACAACCATGTGTGTATGGTGCACCGGATGATTGGCAGT
AAAGACGGCACAGGTGGCTCATCGGGCTATCAGTACCTGC
GCTCCACTGTCAGTGATCGCTACAAGGTGTTTGTGGATCT
GTTTAACCTGGCCACGTTCTTGATTCCGCGAGACTGGGTG
CCCAAACTGGACCCAAGTGAACACACCTTCCTGTACATGG
CTGAATGTTGCGACAGCTCCTACTGCAGCAGCAGTGATGA
TTCTGACTGAACAGATGGAGGAATGAGGAGAAGATGGACA

Related Transcripts

Transcripts related to tdo2a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	tdo2a-204 (1) Ensembl	Ensembl	892 nt	Select Tool ZFIN BLAST
mRNA	tdo2a-201 (1) Ensembl	Ensembl	1,552 nt	Select Tool ZFIN BLAST
ncRNA	tdo2a-003 (1) Ensembl	Ensembl	747 nt	Select Tool ZFIN BLAST
ncRNA	tdo2a-004 (1) Ensembl	Ensembl	965 nt	Select Tool ZFIN BLAST
ncRNA	tdo2a-005	Ensembl	720 nt
ncRNA	tdo2a-006 (1) Ensembl	Ensembl	1,442 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations