Transcript

tdo2a-004

ID

ZDB-TSCRIPT-110912-193

Name

tdo2a-004 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

tdo2a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000150458 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000150458.3|gene_biotype:protein_coding|ENSDARG00000071429.8 transcript_biotype:retained_intron gene_symbol:tdo2a cdna chromosome:GRCz11:14:36738063:36748079:1
GATAACAACAGTCTTGATTGTCATTTATTCACATTTCAGC
CATGAGCGGATGTCCGTATTTTCAGAGGAAATTCTTGTCA
ACTAGTAAGCAGCATCTGAAAGAAGAGGAGAATGATGAAG
CTCAGACTGGAATTAACAAAGCCAGCAAAGGAGGTCTGAT
CTATGGAGACTATCTGCAGCTGGATAAAATAGTGACATCT
CAGGTGCTTCAAAGTGAGCTGAAGGGAAACAAGATCCATG
ACGAACATCTGTTCATCGTCACACATCAAGCATATGAACT
GTGGTTTAAGCAGGTTTTGTGGGAGCTGGACTCAGTCAGA
GAAATCTTCATTAGCGGACATGTACGAGACGAGCGAAACA
TGCTCAAAGTCAACACTCGCATACACAGGATTGTGATGAT
ATTTCGACTGTTGCTTGACCAGTTCGCTGTTCTGGAAACC
ATGACGGCCTTAGACTTCTATGACTTCAGGGAGTATCTCT
CACCAGCTTCAGGCTTCCAGAGTTTGCAGTTTCGACTGCT
GGAGAACAAGATTGGGGTCCCGCACAACCAGAGGGTGCCG
TACAACAGAAGGCATTACAGGGACAATTTCCGAGACCAGG
AGAGTGAGCTGCTCCTCCACTCAGAGCAGGAGCCCACGCT
GCTTCAGTTAGTAGAGCAATGGCTAGAGAGAACGCCAGGC
TTGGAGGAAGATGGCTTCAATTTTTGGGGGAAGCTGGAAA
AAAATATCTTTGAGGGGCTCAGGAGAGAGAAAGAACATAT
TGAGCAAAAACCAGCCTCGGAGAGGAAGGAGGAGATGCTG
GCCGAGCTCATTAAGCAGAGGGACATTTTCTTATCGCTCT
TTGATGAAAAAAGGCATGATCACCTAGTAAGCACAGGTCA
GCAAAGCTCTCTGGAGAGACAAAAATGTCAAGTGATGTTT
CCACTGAAGATCTGCTTGTGTTTGTGCAGGTCAGAGGAGG
CTGTC

OTTDART00000051943 (1) [ Show ] (double-click sequence to select)

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>tpe|OTTDART00000051943|OTTDARG00000028044|ZDB-GENE-030131-1187 tdo2a|no_translation tdo2a-004 LG_ CR931784.8 Danio rerio protein_coding KNOWN, 965 bp
GATAACAACAGTCTTGATTGTCATTTATTCACATTTCAGC
CATGAGCGGATGTCCGTATTTTCAGAGGAAATTCTTGTCA
ACTAGTAAGCAGCATCTGAAAGAAGAGGAGAATGATGAAG
CTCAGACTGGAATTAACAAAGCCAGCAAAGGAGGTCTGAT
CTATGGAGACTATCTGCAGCTGGATAAAATAGTGACATCT
CAGGTGCTTCAAAGTGAGCTGAAGGGAAACAAGATCCATG
ACGAACATCTGTTCATCGTCACACATCAAGCATATGAACT
GTGGTTTAAGCAGGTTTTGTGGGAGCTGGACTCAGTCAGA
GAAATCTTCATTAGCGGACATGTACGAGACGAGCGAAACA
TGCTCAAAGTCAACACTCGCATACACAGGATTGTGATGAT
ATTTCGACTGTTGCTTGACCAGTTCGCTGTTCTGGAAACC
ATGACGGCCTTAGACTTCTATGACTTCAGGGAGTATCTCT
CACCAGCTTCAGGCTTCCAGAGTTTGCAGTTTCGACTGCT
GGAGAACAAGATTGGGGTCCCGCACAACCAGAGGGTGCCG
TACAACAGAAGGCATTACAGGGACAATTTCCGAGACCAGG
AGAGTGAGCTGCTCCTCCACTCAGAGCAGGAGCCCACGCT
GCTTCAGTTAGTAGAGCAATGGCTAGAGAGAACGCCAGGC
TTGGAGGAAGATGGCTTCAATTTTTGGGGGAAGCTGGAAA
AAAATATCTTTGAGGGGCTCAGGAGAGAGAAAGAACATAT
TGAGCAAAAACCAGCCTCGGAGAGGAAGGAGGAGATGCTG
GCCGAGCTCATTAAGCAGAGGGACATTTTCTTATCGCTCT
TTGATGAAAAAAGGCATGATCACCTAGTAAGCACAGGTCA
GCAAAGCTCTCTGGAGAGACAAAAATGTCAAGTGATGTTT
CCACTGAAGATCTGCTTGTGTTTGTGCAGGTCAGAGGAGG
CTGTC

Related Transcripts

Transcripts related to tdo2a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	tdo2a-204 (1) Ensembl	Ensembl	892 nt	Select Tool
mRNA	tdo2a-201 (1) Ensembl	Ensembl	1,552 nt	Select Tool
ncRNA	tdo2a-003 (1) Ensembl	Ensembl	747 nt	Select Tool
ncRNA	tdo2a-004	Ensembl	965 nt
ncRNA	tdo2a-005 (1) Ensembl	Ensembl	720 nt	Select Tool
ncRNA	tdo2a-006 (1) Ensembl	Ensembl	1,442 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations