Transcript

rbm39a-010

ID

ZDB-TSCRIPT-091110-248

Name

rbm39a-010 Nomenclature History

Previous Names

ch211-225g23.1-001
ottdart00000043452

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

rbm39a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000136735 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000136735.2|gene_biotype:protein_coding|ENSDARG00000011613.10 transcript_biotype:retained_intron gene_symbol:rbm39a cdna chromosome:GRCz11:11:24343328:24344304:1
AGAACAGAGCCGCTGCATTGGCCAATAACTTGCAGAAGGG
CAGCGCAGGACCCATGAGGCTCTATGTTGGCTCATTGCAT
TTCAACATCACAGAAGACATGCTCCGAGGCATTTTTGAAC
CATTTGGAAGAGTAAATAGTGTTTACTGTTATTTTATCAC
CTTGAATTGATACATTATTCATGAATCTTTCCTTGCTCGT
ACAGATTGATAGTATCCAACTGATGATGGACAGTGAAACA
GGACGATCTAAAGGATATGGTTTTATCACATTTTCTGATG
CTGAATGTGCAAAGAAGGCACTGGAACAGCTTAATGGCTT
TGAGTTGGCTGGTAGACCAATGAAAGTGGGACATGTGACG
GAGCGCACAGATGCCTCCACCGCCAGCTCCTTCCTGGACA
ACGATGAGCTAGAAAGAACCGGTATTGATCTGGGGACTAC
AGGAAGACTTCAACTCATGGCCAGATTAGCTGAGGGAACT
GGTTTGCAGATCCCGCCCGCTGCACAACAGGCCCTTCAGA
TGAGTGGCTCCATGGTTGCCATGGCTGCAGCTACTGGTTA
GTGGGGGGTTCAGTGCATGTGCTGTTAAATATTTCGTTAT
TTATTAAGGTTGATGCAGCTTGTATGTAATGTTTGTCTTG
TTTTGTAGCTGCTATGAACCCTGGATTGAGTTTTAACATC
AATGTGCCAACAAACCAAGCCTTGAATTTACCATCACAAC
CCATCGCAACACACTGTTTCCAGCTGTCCAACATGTTCAA
TCCAAACTC

OTTDART00000043452 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000043452|OTTDARG00000008479|ZDB-GENE-040426-2852 rbm39a|no_translation rbm39a-010 LG_ BX001056.7 Danio rerio protein_coding KNOWN, 769 bp
AGAACAGAGCCGCTGCATTGGCCAATAACTTGCAGAAGGG
CAGCGCAGGACCCATGAGGCTCTATGTTGGCTCATTGCAT
TTCAACATCACAGAAGACATGCTCCGAGGCATTTTTGAAC
CATTTGGAAGAGTAAATAGTGTTTACTGTTATTTTATCAC
CTTGAATTGATACATTATTCATGAATCTTTCCTTGCTCGT
ACAGATTGATAGTATCCAACTGATGATGGACAGTGAAACA
GGACGATCTAAAGGATATGGTTTTATCACATTTTCTGATG
CTGAATGTGCAAAGAAGGCACTGGAACAGCTTAATGGCTT
TGAGTTGGCTGGTAGACCAATGAAAGTGGGACATGTGACG
GAGCGCACAGATGCCTCCACCGCCAGCTCCTTCCTGGACA
ACGATGAGCTAGAAAGAACCGGTATTGATCTGGGGACTAC
AGGAAGACTTCAACTCATGGCCAGATTAGCTGAGGGAACT
GGTTTGCAGATCCCGCCCGCTGCACAACAGGCCCTTCAGA
TGAGTGGCTCCATGGTTGCCATGGCTGCAGCTACTGGTTA
GTGGGGGGTTCAGTGCATGTGCTGTTAAATATTTCGTTAT
TTATTAAGGTTGATGCAGCTTGTATGTAATGTTTGTCTTG
TTTTGTAGCTGCTATGAACCCTGGATTGAGTTTTAACATC
AATGTGCCAACAAACCAAGCCTTGAATTTACCATCACAAC
CCATCGCAACACACTGTTTCCAGCTGTCCAACATGTTCAA
TCCAAACTC

Related Transcripts

Transcripts related to rbm39a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	rbm39a-209 (1) Ensembl	Ensembl	2,591 nt	Select Tool ZFIN BLAST
mRNA	rbm39a-201 (1) Ensembl	Ensembl	2,366 nt	Select Tool ZFIN BLAST
mRNA	rbm39a-202 (1) Ensembl	Ensembl	546 nt	Select Tool ZFIN BLAST
mRNA	rbm39a-203 (1) Ensembl	Ensembl	790 nt	Select Tool ZFIN BLAST
mRNA	rbm39a-205 (1) Ensembl	Ensembl	2,280 nt	Select Tool ZFIN BLAST
mRNA	rbm39a-213 (1) Ensembl	Ensembl	5,601 nt	Select Tool ZFIN BLAST
mRNA	rbm39a-214 (1) Ensembl	Ensembl	1,604 nt	Select Tool ZFIN BLAST
ncRNA	rbm39a-002 (1) Ensembl	Ensembl	2,848 nt	Select Tool ZFIN BLAST
ncRNA	rbm39a-003 (1) Ensembl	Ensembl	817 nt	Select Tool ZFIN BLAST
ncRNA	rbm39a-005 (1) Ensembl	Ensembl	1,818 nt	Select Tool ZFIN BLAST
ncRNA	rbm39a-007 (1) Ensembl	Ensembl	826 nt	Select Tool ZFIN BLAST
ncRNA	rbm39a-008 (1) Ensembl	Ensembl	843 nt	Select Tool ZFIN BLAST
ncRNA	rbm39a-010	Ensembl	769 nt
ncRNA	rbm39a-011 (1) Ensembl	Ensembl	720 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations