Transcript

nphp3-202

ID
ZDB-TSCRIPT-091110-1922
Name
nphp3-202 Nomenclature History
Previous Names
  • nphp3-001
  • dkey-56l10.1-001
  • dkey-96n2.2-001
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000142460 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000142460.4|gene_biotype:protein_coding|ENSDARG00000078261.7 transcript_biotype:protein_coding gene_symbol:nphp3 cdna chromosome:GRCz11:24:9612410:9663997:1
AGGAACAAGTTGTGGAAAAGCGTGTACAACGATAAGATTT
GTTTATCTTTCTGCCTTATATACCAGCGAAGTTTATGAAA
GCGTTTCCTAATGATTCATATTTTGGGTTTTAATATCGGT
TTTGACTAAGTTCATCGTCCTGGAGCTCCTTCGTTTTTTC
GCTTGGGTGGAGTATTTTTCTTCACCCTTCTGGGGAACGT
CTCGCTTATCGTCTCCAGGTTGACCACGGGATTTTAAGAC
CACCGTTAAAGAACCATCATGTAGCCTGCAATGCGGTTTG
GTGACCGTTATATTTGTGGCACCTCTTATCAGTTGTTATG
GGTACGGCATCCTCTCTGGTGAGCCCTGGTGAGGTGATTG
AAGATGCGTATGGTGGCGAAGGAGGAGAAGCATGCGAGAT
ACCAGTGGAGGTGAAGCCAAAGGCACGCCTGCTGCGGAGC
TCCTTCCGTCGTGGGCCTCGTGTCATCGGTGCCAGCTTCA
AATCCACCGGATCTGTGGAACTGGAGTACGCAGCGGAGTA
TGAGCGCCTCAGGAAAGACTACGAGATCTTCAGAGTCAGC
AAGAACAATGAAATCACCTCCATGCAAAAGAAAGAAGCTA
AGCTGGATGAGGAAAACAAGAGGTTGCGGGCTGAGCTGCA
GGCTCTTCAGAAGACTTACCAGAAGATTCTTCGAGAAAAG
GAAAGTGCCTTGGAAGCAAAATACCAAGCCATGGAAAGAG
CTGCCACTTTTGAACATGACAGAGACAAGGTTAAACGACA
GTTTAAGATATTTCGTGAAACTAAAGAAAAAGAAATTCAG
GATTTGCTGCGGGCAAAACGAGATCTGGAGTCAAAACTTC
AACAGCTGCAGGCGCAAGGCATTCAGATTTATGACCCAGC
AGACTCAGATTCTGATGACAACCACACCACTGTTACTACT
GCAGGAACTCAATGTGAATACTGGAGTGGTGGTGTGTTGG
GCAGCGAGCCGTCAATGGGCAGTATGATGCAGTTACAGCA
GACACACAGGGGTCCGGAATTCGCTCACAGTCTTATTGAC
GTGGAGGGGCCGTTTGCTAATGTCAGCAGAGATGATTGGG
ATGCGGCGGTGGCCAGTCTTCTGCAGGTTTCTCCTCACGT
CTCTCAGTCTCTGTGGAGTAACACTGTCCGCTGCTACCTC
ATATACACACACGAGACCAAAGCAGAGCTGCAGACTTTCA
TTCAGACTTATTCTTTAAGGCTTCGGAGGTTTTGTGAAGG
TTTGGGTCATTTTTACCTGAACGTGTCATTTCCTGAGGAG
AAGGCTGCTGTGTTTGCTGCTGAACGCAGACGAGAGATGG
AGAGGAGCTCTGTGTGTGTGCTGCTTCTCAAGTCCTCAGT
GTCCAGCTGTGTTGTGGAGGATGTTGAGGAAGCGTTTGTG
AAGACCCCGGATGCTCGACCTCTCTTGCTGTATTTGCGAA
CTGCCGACAGAAAAGGTGAAAAGGAAGAGGTGTCTACTCT
CAGCCCAGCCACCAGAGACCTGCTAGAGAGAGTGAACAAG
GCTGACAGAAGTGCCAAACTTAAGGTAGTGGATCACGCTG
GGTCTGTGGAGGAAGGAGCTGCTCTTATCTTCTCTCAGCT
GGAAAGAATCATAAAACAAGAGTTGTTGGGATTGGAGTTA
GAGGAGAATGGAGTGGTGGAGGAAAGAGAAGAGGAAGACT
CTGGTGATGTGCTTTGGGATCTTCATGATGAGCAGGAGCA
GATAGAGGCATTTCAGCAAGCTTGCGGCGCTGCTGCCAGA
TTCAGCTTTCAAAAGTATGTTGACAGACTCAATGACATGG
TAGCTGCCCCTCCACCCACTCCTCCGCTGCTGGTATCTGG
TGCACCTGGATCAGGCAAATCCCTTTTGCTGGCTAAATGG
ATAGAGTTACAGCAGAAACACTCTCCCAACACCCTCATCC
TTTATCATTTTACGGGACGTCCTCTCTCTACCAGCACAGA
TCCTGTGCTTATCATTAAACGCCTCACAGTAAAGCTCCTC
CAGCATTTCTGGTCTATTTCCGGCCTTTCAATGGACCCTT
CGAAGATCCTCGAAGAGTTCCCACGCTGGCTAGAGCGACT
GTCTGCACGTCACCATGGAAACATCATAATCATCATTGAT
TCCATTGACCAAATACAGAATGCTGAGCGCCACATGAAAT
GGTTGATTGATCCGCTTCCTGCTAATGTGCGAGTGCTGGT
GTCGGTTAATGTGGAGACCTGCCCACAAGCATGGAGATTG
TGGCCCACACTGCACCTAGATCCACTCAATCCCAGAGAGG
TAAAGAGTGTCATCAGCACGGAGTGTGTGAGCGTGGATAT
CAAACTCAGTAAAGATCAGGAGAAGAAGCTGGAGAAACAC
TGTCGTTCAGCAGCAACATGCAACGCACTCTATGTCTCAC
TACTGGCCAGACTCATTACACACTTCAGTACCTCTTGGAC
ATTGGACAGAACTCTACAACAGTGTGTAATGTGTCAAGAT
ACAGTATCACTCTACAGACTTGGGCTGAAGGTAGCACTGG
ACTCACTAAACAGTGATCAGGAAAAACACATCATGAAAGA
GTTATTGTGCCTAGTTTGTGCCAGCCACAACGGCATCAGC
GAATCAGAAGTCTTGGAGCTGTTCCCAGACCTGACTTTCC
CTGCTCTCATCTCAATGCTACACAATCTGGAGAGGCTTCT
CATTATTACTTATGCCTGTGGGCTTATACGGTTTCAGCAC
TCACAGGCATGTGAAGGGGTCAACCAAGAGTTTCTGGATG
GTGACAAATGCCGTGGATCCTACAGAGAGAAATGTATTCG
CTTCTTCAGCCAGCAGTTGGAGCAAGACCGAGTTACCTGG
AGAGTGGCTGATGAGTTACCATGGTTACTGCAGCAGCAGG
AAGACCGAAGTAAACTTCAGATGAGTCTGCTTAACCTGTT
TGTGTCCCAAAACCTCTACAAGAGGGGTCATTTTTCAGAG
CTTCTTGCATACTGGCAGTTTGTGGGTAAGGATAAGTGTT
CGATGGCGACGGAGTATTTCGACGCATTGAAAGAGTTTGA
GAAGACCTGTGAGAGTGAGCAGAGCATGAGCCGGCTGGCC
AACCTATACGAAACACTGGGACGATTCCTTAAAGATCTGG
GATTGCTCAGTCAGCGCTCCTTGGAGATCCGTGAGACTGC
TCTGGACCCCGACCACCCAAGTGTGGCTCAGTCCCTGCAC
CAGCTGGCGGGGGTGTACGTTCATTGGAGGAAATTTGGAA
ACGCAGAGCAGTTGTACAAACAAGCTATGGAGATTTGTGA
AAACGCTTATGGCCCTGAACACAGCACCGTCGCAAGAGAA
CTAGACTCGCTTTCACTGCTCTACCAGAAACAAAACAAAT
ATGAGCAGGCTGAAAAGTTGAGAAAGAGATCCGTCAAGAT
CAGACAGAAAACAGCACGACAGAAAGGCCACATGTATGGT
TTCGCACTTCTGAAGCGACGGGCACTGCAGTTAGAGGAAC
TGACACTTGGCAAAGACTCAACAGATTGTGCCAAGACTCT
AAATGAGCTCGGCGTGCTGTATTACCTGCAGAACAACCTA
GATGCTGCTAAGTTGTTCTTGACCAGATCTCTGGAGATGC
GTCAACGTGTGCTGGGACCGGACCATCCCGACTGCGCCCA
GTCCCTGAACAACCTGGCTGCGCTCCACAGCGAGAGGAAA
GAATACGAGAGTGCCGAGGAGCTCTACGAAAGAGCATTAG
ACATCCGGAAACGAGCGCTGGCCCCAGACCACCCCTCTCT
CGCTTATACCCTCAAACACTTAGCCATGCTTTACAAACGC
AGGGGGAAGCTGGAAAAGGCGGTTCCTTTATATGAACTAG
CTCTTGAGATCAGAGAGAAGAGCTTTGGGCCCAAGCACCC
CAGTGTGGCCACTGCTTTGGTTAACCTTGCAGTGCTCTAC
TGCCAGCTGAAGCAGCACAGTGATGCATTGCCTTTGTATG
AACGCGCTCTCAAGGTTTATGAGGACAGTCTTGGTCGACT
GCATCCTCGTGTTGGAGAGACTCTAAAAAACCTGGCTGTG
CTCAGTTACGAAGAGGGTGATTTCGAGAAGGCTGCTGAAC
TCTACAAGCGAGCAATGGAAATTAAAGAGGCCGAGCCATC
TCTGGTGTGCGGTAAGGCTCCTTCCCGTCACTCATCTAGT
GGTGACACCTTTAGCATGCGGAGCCCCGCCCTGCCAAATG
CATCAAGGTGACACCGGACCACACAATACTTAAATAAGAT
GAACTCGGACCTCATTAAAAAGCCATATCGACTACACCTG
CTGTGTTTAGGCCTGTGGTTGAACACCTCTACGTGGAAAT
ACAGAATATGCAGGACACAAAAAACTGTTCTCATGCCTAC
TGATGTTTTGTTTAGTCATTTACATCATCAGTGTTTTAAT
CTAATCTTCACTGCCACTGGGCGTAAAAAGGAAGCGCTTT
ATACGTAATTGTGATGTCTTGTCAGTCAGAAATCTGTTCA
ATCAGCATATCAGTGACATTTCAAGTGCATTGCTGATAAA
ATGGAAGATGTCTAAA

OTTDART00000044319 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000044319|OTTDARG00000031805|ZDB-GENE-091204-117 nphp3|OTTDARP00000035076 nphp3-001 LG_none BX470247.5,CR381660.12 Danio rerio protein_coding KNOWN, 4536 bp
AGGAACAAGTTGTGGAAAAGCGTGTACAACGATAAGATTT
GTTTATCTTTCTGCCTTATATACCAGCGAAGTTTATGAAA
GCGTTTCCTAATGATTCATATTTTGGGTTTTAATATCGGT
TTTGACTAAGTTCATCGTCCTGGAGCTCCTTCGTTTTTTC
GCTTGGGTGGAGTATTTTTCTTCACCCTTCTGGGGAACGT
CTCGCTTATCGTCTCCAGGTTGACCACGGGATTTTAAGAC
CACCGTTAAAGAACCATCATGTAGCCTGCAATGCGGTTTG
GTGACCGTTATATTTGTGGCACCTCTTATCAGTTGTTATG
GGTACGGCATCCTCTCTGGTGAGCCCTGGTGAGGTGATTG
AAGATGCGTATGGTGGCGAAGGAGGAGAAGCATGCGAGAT
ACCAGTGGAGGTGAAGCCAAAGGCACGCCTGCTGCGGAGC
TCCTTCCGTCGTGGGCCTCGTGTCATCGGTGCCAGCTTCA
AATCCACCGGATCTGTGGAACTGGAGTACGCAGCGGAGTA
TGAGCGCCTCAGGAAAGACTACGAGATCTTCAGAGTCAGC
AAGAACAATGAAATCACCTCCATGCAAAAGAAAGAAGCTA
AGCTGGATGAGGAAAACAAGAGGTTGCGGGCTGAGCTGCA
GGCTCTTCAGAAGACTTACCAGAAGATTCTTCGAGAAAAG
GAAAGTGCCTTGGAAGCAAAATACCAAGCCATGGAAAGAG
CTGCCACTTTTGAACATGACAGAGACAAGGTTAAACGACA
GTTTAAGATATTTCGTGAAACTAAAGAAAAAGAAATTCAG
GATTTGCTGCGGGCAAAACGAGATCTGGAGTCAAAACTTC
AACAGCTGCAGGCGCAAGGCATTCAGATTTATGACCCAGC
AGACTCAGATTCTGATGACAACCACACCACTGTTACTACT
GCAGGAACTCAATGTGAATACTGGAGTGGTGGTGTGTTGG
GCAGCGAGCCGTCAATGGGCAGTATGATGCAGTTACAGCA
GACACACAGGGGTCCGGAATTCGCTCACAGTCTTATTGAC
GTGGAGGGGCCGTTTGCTAATGTCAGCAGAGATGATTGGG
ATGCGGCGGTGGCCAGTCTTCTGCAGGTTTCTCCTCACGT
CTCTCAGTCTCTGTGGAGTAACACTGTCCGCTGCTACCTC
ATATACACACACGAGACCAAAGCAGAGCTGCAGACTTTCA
TTCAGACTTATTCTTTAAGGCTTCGGAGGTTTTGTGAAGG
TTTGGGTCATTTTTACCTGAACGTGTCATTTCCTGAGGAG
AAGGCTGCTGTGTTTGCTGCTGAACGCAGACGAGAGATGG
AGAGGAGCTCTGTGTGTGTGCTGCTTCTCAAGTCCTCAGT
GTCCAGCTGTGTTGTGGAGGATGTTGAGGAAGCGTTTGTG
AAGACCCCGGATGCTCGACCTCTCTTGCTGTATTTGCGAA
CTGCCGACAGAAAAGGTGAAAAGGAAGAGGTGTCTACTCT
CAGCCCAGCCACCAGAGACCTGCTAGAGAGAGTGAACAAG
GCTGACAGAAGTGCCAAACTTAAGGTAGTGGATCACGCTG
GGTCTGTGGAGGAAGGAGCTGCTCTTATCTTCTCTCAGCT
GGAAAGAATCATAAAACAAGAGTTGTTGGGATTGGAGTTA
GAGGAGAATGGAGTGGTGGAGGAAAGAGAAGAGGAAGACT
CTGGTGATGTGCTTTGGGATCTTCATGATGAGCAGGAGCA
GATAGAGGCATTTCAGCAAGCTTGCGGCGCTGCTGCCAGA
TTCAGCTTTCAAAAGTATGTTGACAGACTCAATGACATGG
TAGCTGCCCCTCCACCCACTCCTCCGCTGCTGGTATCTGG
TGCACCTGGATCAGGCAAATCCCTTTTGCTGGCTAAATGG
ATAGAGTTACAGCAGAAACACTCTCCCAACACCCTCATCC
TTTATCATTTTACGGGACGTCCTCTCTCTACCAGCACAGA
TCCTGTGCTTATCATTAAACGCCTCACAGTAAAGCTCCTC
CAGCATTTCTGGTCTATTTCCGGCCTTTCAATGGACCCTT
CGAAGATCCTCGAAGAGTTCCCACGCTGGCTAGAGCGACT
GTCTGCACGTCACCATGGAAACATCATAATCATCATTGAT
TCCATTGACCAAATACAGAATGCTGAGCGCCACATGAAAT
GGTTGATTGATCCGCTTCCTGCTAATGTGCGAGTGCTGGT
GTCGGTTAATGTGGAGACCTGCCCACAAGCATGGAGATTG
TGGCCCACACTGCACCTAGATCCACTCAATCCCAGAGAGG
TAAAGAGTGTCATCAGCACGGAGTGTGTGAGCGTGGATAT
CAAACTCAGTAAAGATCAGGAGAAGAAGCTGGAGAAACAC
TGTCGTTCAGCAGCAACATGCAACGCACTCTATGTCTCAC
TACTGGCCAGACTCATTACACACTTCAGTACCTCTTGGAC
ATTGGACAGAACTCTACAACAGTGTGTAATGTGTCAAGAT
ACAGTATCACTCTACAGACTTGGGCTGAAGGTAGCACTGG
ACTCACTAAACAGTGATCAGGAAAAACACATCATGAAAGA
GTTATTGTGCCTAGTTTGTGCCAGCCACAACGGCATCAGC
GAATCAGAAGTCTTGGAGCTGTTCCCAGACCTGACTTTCC
CTGCTCTCATCTCAATGCTACACAATCTGGAGAGGCTTCT
CATTATTACTTATGCCTGTGGGCTTATACGGTTTCAGCAC
TCACAGGCATGTGAAGGGGTCAACCAAGAGTTTCTGGATG
GTGACAAATGCCGTGGATCCTACAGAGAGAAATGTATTCG
CTTCTTCAGCCAGCAGTTGGAGCAAGACCGAGTTACCTGG
AGAGTGGCTGATGAGTTACCATGGTTACTGCAGCAGCAGG
AAGACCGAAGTAAACTTCAGATGAGTCTGCTTAACCTGTT
TGTGTCCCAAAACCTCTACAAGAGGGGTCATTTTTCAGAG
CTTCTTGCATACTGGCAGTTTGTGGGTAAGGATAAGTGTT
CGATGGCGACGGAGTATTTCGACGCATTGAAAGAGTTTGA
GAAGACCTGTGAGAGTGAGCAGAGCATGAGCCGGCTGGCC
AACCTATACGAAACACTGGGACGATTCCTTAAAGATCTGG
GATTGCTCAGTCAGCGCTCCTTGGAGATCCGTGAGACTGC
TCTGGACCCCGACCACCCAAGTGTGGCTCAGTCCCTGCAC
CAGCTGGCGGGGGTGTACGTTCATTGGAGGAAATTTGGAA
ACGCAGAGCAGTTGTACAAACAAGCTATGGAGATTTGTGA
AAACGCTTATGGCCCTGAACACAGCACCGTCGCAAGAGAA
CTAGACTCGCTTTCACTGCTCTACCAGAAACAAAACAAAT
ATGAGCAGGCTGAAAAGTTGAGAAAGAGATCCGTCAAGAT
CAGACAGAAAACAGCACGACAGAAAGGCCACATGTATGGT
TTCGCACTTCTGAAGCGACGGGCACTGCAGTTAGAGGAAC
TGACACTTGGCAAAGACTCAACAGATTGTGCCAAGACTCT
AAATGAGCTCGGCGTGCTGTATTACCTGCAGAACAACCTA
GATGCTGCTAAGTTGTTCTTGACCAGATCTCTGGAGATGC
GTCAACGTGTGCTGGGACCGGACCATCCCGACTGCGCCCA
GTCCCTGAACAACCTGGCTGCGCTCCACAGCGAGAGGAAA
GAATACGAGAGTGCCGAGGAGCTCTACGAAAGAGCATTAG
ACATCCGGAAACGAGCGCTGGCCCCAGACCACCCCTCTCT
CGCTTATACCCTCAAACACTTAGCCATGCTTTACAAACGC
AGGGGGAAGCTGGAAAAGGCGGTTCCTTTATATGAACTAG
CTCTTGAGATCAGAGAGAAGAGCTTTGGGCCCAAGCACCC
CAGTGTGGCCACTGCTTTGGTTAACCTTGCAGTGCTCTAC
TGCCAGCTGAAGCAGCACAGTGATGCATTGCCTTTGTATG
AACGCGCTCTCAAGGTTTATGAGGACAGTCTTGGTCGACT
GCATCCTCGTGTTGGAGAGACTCTAAAAAACCTGGCTGTG
CTCAGTTACGAAGAGGGTGATTTCGAGAAGGCTGCTGAAC
TCTACAAGCGAGCAATGGAAATTAAAGAGGCCGAGCCATC
TCTGGTGTGCGGTAAGGCTCCTTCCCGTCACTCATCTAGT
GGTGACACCTTTAGCATGCGGAGCCCCGCCCTGCCAAATG
CATCAAGGTGACACCGGACCACACAATACTTAAATAAGAT
GAACTCGGACCTCATTAAAAAGCCATATCGACTACACCTG
CTGTGTTTAGGCCTGTGGTTGAACACCTCTACGTGGAAAT
ACAGAATATGCAGGACACAAAAAACTGTTCTCATGCCTAC
TGATGTTTTGTTTAGTCATTTACATCATCAGTGTTTTAAT
CTAATCTTCACTGCCACTGGGCGTAAAAAGGAAGCGCTTT
ATACGTAATTGTGATGTCTTGTCAGTCAGAAATCTGTTCA
ATCAGCATATCAGTGACATTTCAAGTGCATTGCTGATAAA
ATGGAAGATGTCTAAA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations