Gene

nphp3

ID
ZDB-GENE-091204-117
Name
nephronophthisis 3
Symbol
nphp3 Nomenclature History
Previous Names
  • si:dkey-56l10.1
Type
protein_coding_gene
Location
Chr: 24 Mapping Details/Browsers
Description
Involved in several processes, including Kupffer's vesicle development; left/right pattern formation; and morphogenesis of an epithelium. Predicted to localize to cilium. Human ortholog(s) of this gene implicated in Meckel syndrome 7; Senior-Loken syndrome; nephronophthisis; nephronophthisis 3; and renal-hepatic-pancreatic dysplasia. Orthologous to human NPHP3 (nephrocystin 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
6 figures from 3 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With nphp3 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Meckel syndrome 7 Alliance Meckel syndrome 7 267010
nephronophthisis 3 Alliance Nephronophthisis 3 604387
renal-hepatic-pancreatic dysplasia Alliance Renal-hepatic-pancreatic dysplasia 1 208540
Associated With nphp3 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR051787 Effector and Ciliary Development-Associated Protein
Homologous_superfamily IPR011990 Tetratricopeptide-like helical domain superfamily
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
Repeat IPR019734 Tetratricopeptide repeat
Domain Details Per Protein
Protein Length Effector and Ciliary Development-Associated Protein P-loop containing nucleoside triphosphate hydrolase Tetratricopeptide-like helical domain superfamily Tetratricopeptide repeat
UniProtKB:P0CI65
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA nphp3-201 (1) Ensembl 4,554 nt
mRNA nphp3-202 (1) Ensembl 4,536 nt
mRNA nphp3-203 (1) Ensembl 4,385 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations