Transcript

scarb1-201

ID

ZDB-TSCRIPT-091110-1528

Name

scarb1-201 Nomenclature History

Previous Names

glis3-001
scarb1-002
ottdart00000042828

Transcript Type

mRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

scarb1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000158087 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000158087.2|gene_biotype:protein_coding|ENSDARG00000101557.3 transcript_biotype:protein_coding gene_symbol:scarb1 cdna chromosome:GRCz11:10:44719697:44745966:1
CTTTTATAACGCTGACCCGCAGCTGCTGGACACAGTCAGT
GGATTGAGCCCAAGTGAAGATGAACATGGCCTTTTTATTG
ATATCCACCCGGAGACTGGTGTGCCGGTGAACGTCTCTGT
TCGGTTGCAGCTCAACCTTTTCTTAAAGAAAGTTTCGGGA
ATCTCAGAAACAGGGAATATAGCGGAGGTGGTGATGCCCA
TGCTGTGGTTTGAAGAGAGCGGCTACATCGACGGACCCGT
CCTGCACACGTTTCGCACCAATCTGGTGGTTCTGCCAAAG
GTCATGGAGTACATGCAGTACATCTTCATCGCTCTCGGCC
TCGCTGCCATCCTGACTGCTGTCATATTATTCCTCACCGA
TAAGGACAACGTAAACCATTCAAAACAGCATCCGGCCAAT
GAGACGCAGGCTGAGAAATATAACCAGAGCAACACAGGTA
AAAAGTAAAACGAGTGGTTCGTCCAGCACAGATGTGGATC
CATCCAGCACAACCAGTGAAAAAGCCCCATTACTACAGTC
ACCAACCAGCTGAACCATCATCCACATTCACAATATTTAA
AAGTTCCACAAATAAAGCTTATTTTATTATAACAAGCTGT
GGATGATTGGACTGGATCCAGTACAGATGATGCATTATGA
ACTCTTGTGTGTGTTTTTGTACAGCGGTTGGGTTCTCCAT
GGAGTTTGCATTACATTTAGCATTGAAAAACTGAGCATCT
GTGTTATGGTCTGGGTTAGTTAAATATTTTTATTTTGAAA
ATACTTGAATATA

OTTDART00000042828 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000042828|OTTDARG00000030827|ZDB-GENE-031126-1 scarb1|OTTDARP00000034002 scarb1-002 LG_ CU463283.16 Danio rerio protein_coding KNOWN, 773 bp
CTTTTATAACGCTGACCCGCAGCTGCTGGACACAGTCAGT
GGATTGAGCCCAAGTGAAGATGAACATGGCCTTTTTATTG
ATATCCACCCGGAGACTGGTGTGCCGGTGAACGTCTCTGT
TCGGTTGCAGCTCAACCTTTTCTTAAAGAAAGTTTCGGGA
ATCTCAGAAACAGGGAATATAGCGGAGGTGGTGATGCCCA
TGCTGTGGTTTGAAGAGAGCGGCTACATCGACGGACCCGT
CCTGCACACGTTTCGCACCAATCTGGTGGTTCTGCCAAAG
GTCATGGAGTACATGCAGTACATCTTCATCGCTCTCGGCC
TCGCTGCCATCCTGACTGCTGTCATATTATTCCTCACCGA
TAAGGACAACGTAAACCATTCAAAACAGCATCCGGCCAAT
GAGACGCAGGCTGAGAAATATAACCAGAGCAACACAGGTA
AAAAGTAAAACGAGTGGTTCGTCCAGCACAGATGTGGATC
CATCCAGCACAACCAGTGAAAAAGCCCCATTACTACAGTC
ACCAACCAGCTGAACCATCATCCACATTCACAATATTTAA
AAGTTCCACAAATAAAGCTTATTTTATTATAACAAGCTGT
GGATGATTGGACTGGATCCAGTACAGATGATGCATTATGA
ACTCTTGTGTGTGTTTTTGTACAGCGGTTGGGTTCTCCAT
GGAGTTTGCATTACATTTAGCATTGAAAAACTGAGCATCT
GTGTTATGGTCTGGGTTAGTTAAATATTTTTATTTTGAAA
ATACTTGAATATA

Related Transcripts

Transcripts related to scarb1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	scarb1-206 (1) Ensembl	Ensembl	844 nt	Select Tool ZFIN BLAST
mRNA	scarb1-001_dup (1)		1,491 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	scarb1-201	Ensembl	773 nt
mRNA	scarb1-202 (1) Ensembl	Ensembl	4,451 nt	Select Tool ZFIN BLAST
mRNA	scarb1-203 (1) Ensembl	Ensembl	436 nt	Select Tool ZFIN BLAST
mRNA	scarb1-204 (1) Ensembl	Ensembl	2,598 nt	Select Tool ZFIN BLAST
mRNA	scarb1-205 (1) Ensembl	Ensembl	4,412 nt	Select Tool ZFIN BLAST
mRNA	scarb1-207 (1) Ensembl	Ensembl	6,606 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations