Transcript

scarb1-204

ID

ZDB-TSCRIPT-091110-1522

Name

scarb1-204 Nomenclature History

Previous Names

scarb1-001

Transcript Type

mRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

scarb1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000042827 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000042827|OTTDARG00000030827|ZDB-GENE-031126-1 scarb1|OTTDARP00000034001 scarb1-001 LG_ CU463283.16 Danio rerio protein_coding KNOWN, 2598 bp
AGAGGCGGCGCGCTTTGCTAATCATAAACATGACGATCAC
GCTGCTGGACGGCTATAAAAGCTGCTCGAACACAGAGACG
GACTTTAACATCGCTCACAGCTGTGCACTTCATGACCGTA
AAGCTATAAGAGCATTAATTACCTCAATGAGCCGGCTTTT
ATGGCTTTATCTCGCGTAAATGATAGTTTGTTCAGCTGTT
GAGACGGTCTCTCTCGCGTTTGGAGCTCGCCGCGCTTTCC
AGAAGAAATCACTTTATTTATTTCCTTCAGAACTTCTGCG
TTTATTTTGAAGTGTGAGAAATAAGGATGGTGTCTCAAAC
GACAGTATCGATCGTGTTTTTAGTTCTGGGAGGCATGGCG
TTGTTGTTCGGGACTGTCCTGGTGTTTGTGGGACCGATCA
TAATTGATGATCAAATAGTGAAGAATGTGGAGATCAATCC
CAAAAACGATCTCTCCTACACCATGTGGAAGGACATCCCG
GTTCCTTTCTTCATGTCTGTTTATTTTTTCCACATCGTCA
ATCCTGATGAGATCCTGAAAGGAGAAAGGCCCATGGTGAT
CCAGAGAGGGCCGTACGTGTACCGAGAAAATCGCTGGAAG
GACAACATCACGTTTCATGAAAACCACACGGTGTCATATA
AGGAGTATCGTCAGTATTTCTTTGAGGAGAGCATGTCTGT
GGGCGACGAGTCTGATGTGGTCACCATCCCTAATATGCTG
GTGCTGGGAGCATCAGTGATGATGGAGAACATGCCGTTTC
CCGTCCGCCTTCTGCTCAGCACCACCTTCAAGACCTTTAA
CGAGGGTCCGTTCCTGACCAAACCAGTAGGAGAGCTGATG
TGGGGCTATGACAGCAAACTAGTGGACTTCCTCAACAAAT
ACCTGCCCGGCATGCTCCCGTCCAGCGGCAAATTCGGCTT
ATTTGCTGATTTTAATAACTCCAACACGGGGCTGTTCACC
ATCTTCACCGGCCGAGACGACATCCGCAAGGTGCACATGG
TGGACTCCTGGAACGGCCTCAAAAATGTGGACTACTGGAG
GTCTGATCAGTGTAATATGATCAACGGCACAGCGGGTCAG
ATGTGGCCTCCTTTTATGACCAAAGAGACCACCATGCCCT
TCTACAGCCCAGACGCCTGCCGGTCGATGGAGCTGGTGTA
TCAGCGGCCGCTGGTGTCCAGTGGGATTCCTGTTTACCGA
TACGTCTCTCCGAAAACTCTGTTTGCAAACGGGGCAGACT
TTCCTCCAAATGAAGGATTCTGTCCGTGCAGGCAGTCGGG
CCTGCTGAACGTCAGCTCCTGCAGACACGGTTCTCCAACA
TTCATCTCTCAGCCGCACTTTTATAACGCTGACCCGCAGC
TGCTGGACACAGTCAGTGGATTGAGCCCAAGTGAAGATGA
ACATGGCCTTTTTATTGATATCCACCCGGAGACTGGTGTG
CCGGTGAACGTCTCTGTTCGGTTGCAGCTCAACCTTTTCT
TAAAGAAAGTTTCGGGAATCTCAGAAACAGGGAATATAGC
GGAGGTGGTGATGCCCATGCTGTGGTTTGAAGAGAGCGGC
TACATCGACGGACCCGTCCTGCACACGTTTCGCACCAATC
TGGTGGTTCTGCCAAAGGTCATGGAGTACATGCAGTACAT
CTTCATCGCTCTCGGCCTCGCTGCCATCCTGACTGCTGTC
ATATTATTCCTCACCGATAAGGTAAAAAGTAAAACGAGTG
GTTCGTCCAGCACAGATGTGGATCCATCCAGCACAACCAG
TGAAAAAGCCCCATTACTACAGTCACCAACCAGCTGAACC
ATCATCCACATTCACAATATTTAAAAGTTCCACAAATAAA
GCTTATTTTATTATAACAAGCTGTGGATGATTGGACTGGA
TCCAGTACAGATGATGCATTATGAACTCTTGTGTGTGTTT
TTGTACAGCGGTTGGGTTCTCCATGGAGTTTGCATTACAT
TTAGCATTGAAAAACTGAGCATCTGTGTTATGGTCTGGGT
TAGTTAAATATTTTTATTTTGAAAATACTTGAATATACAA
GATTGTGAAATGGTGCACACTAAAATTAAACAACACTGTC
TAAACACTCTAATTTCCTACCAGGAAAAAAACTATTCAAA
GTTATCCTTTGGTAACCTTTAATCTATTGTAAAAAAAGGA
AGTGCCTTGAACATTTTCTGACAATATCGTGCCATTATTA
ACTTAAATATGCTGTCACAGCAGATAAACATGCTGAGCAT
GCATATTTCCCAATACTTTGAATACATGTGTTGATAATCA
GTTTTTAAAGGTTCTCAGAGGATGTAAAATATTGTTAAAT
GTCCATGTGTTTGCGTTTTTCTGGCTGTTATATAAAATGA
AATATTTTTTTTTTTTTTTTGTATTTGAGGTTTATAGTTT
CAGATGTTGTAAAAACTTTGGACAAAGGACAAAAAAAAGC
ATGAGCCATATGAGCCGAAATGTTTAACACCTTATAAATG
GCGCTTTTAATTGTGTATCAAGAGATTATGACTGTTTTTA
CTAAACATGTAATTGTGGACTGAATAAATTGCGTTTCACA
TCAAAATCAGATATAAATGTGGAACAAAATAAGCACAA

Related Transcripts

Transcripts related to scarb1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	scarb1-206 (1) Ensembl	Ensembl	844 nt	Select Tool ZFIN BLAST
mRNA	scarb1-001_dup (1)		1,491 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	scarb1-201 (1) Ensembl	Ensembl	773 nt	Select Tool ZFIN BLAST
mRNA	scarb1-202 (1) Ensembl	Ensembl	4,451 nt	Select Tool ZFIN BLAST
mRNA	scarb1-203 (1) Ensembl	Ensembl	436 nt	Select Tool ZFIN BLAST
mRNA	scarb1-204	Ensembl	2,598 nt
mRNA	scarb1-205 (1) Ensembl	Ensembl	4,412 nt	Select Tool ZFIN BLAST
mRNA	scarb1-207 (1) Ensembl	Ensembl	6,606 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations