Transcript

srsf2a-206

ID

ZDB-TSCRIPT-090929-8567

Name

srsf2a-206 Nomenclature History

Previous Names

sfrs2-005
srsf2-005
srsf2a-005

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

srsf2a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000146446 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000146446.3|gene_biotype:protein_coding|ENSDARG00000057484.8 transcript_biotype:nonsense_mediated_decay gene_symbol:srsf2a cdna chromosome:GRCz11:12:31720699:31722890:-1
GTCTCCAGAGGCTACTGATGACGCTGCTGTTGAATCGTGA
AATCTGCTGATTCCTGTTTGCAAAAGAGGAGTTTGGGGCA
GTTTGAGAGCAGTTAGTGTGTGATCCGACCATTGGCTGCC
TGCTGCTGATTGGCGGTTGCTATGGAGCAGATGATGACTG
GTTGAATCTTCAAGGATCGCAGTGAACAGATGTCCGTCTG
AGGATACCCAAATTATCCATATATCAGACCGAAAGGCGCA
GTTGCGTAGCAGTTGAGTTTTGCTGGTTAGCTGTTAAGGT
GGCGTGTTGCGGTGCAGAGTGCTTGGCTGTTTCCAGTATT
CTCCTGATTGCTCCTGTGTAACGCCCCGATTTGTTTAAAT
TTGGCTGCTGCGTTTTTATTTGCAGAAACATCTTGTGCAA
GTCTTTTTATGAATATTCATAATGCAGATGTCTGAGCTTA
ACTCATATCCACAATAGTTCCATCATTCAACATGCTCAAT
TTGTAGTAATTTCCATGTGAGTGGTAATAAAGGTTTCCTT
TGTGTATACCTAATTCTTTACTGGTCTGTCAGTGTCTCTT
ATGATGTTTGATGTAAACGCGCAAATTAAAAGCCTCCATA
ACT

OTTDART00000025861 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000025861|OTTDARG00000020615|ZDB-GENE-040426-2706 srsf2a|OTTDARP00000045902 sfrs2-005 LG_ CR352342.9 Danio rerio protein_coding KNOWN, 603 bp
GTCTCCAGAGGCTACTGATGACGCTGCTGTTGAATCGTGA
AATCTGCTGATTCCTGTTTGCAAAAGAGGAGTTTGGGGCA
GTTTGAGAGCAGTTAGTGTGTGATCCGACCATTGGCTGCC
TGCTGCTGATTGGCGGTTGCTATGGAGCAGATGATGACTG
GTTGAATCTTCAAGGATCGCAGTGAACAGATGTCCGTCTG
AGGATACCCAAATTATCCATATATCAGACCGAAAGGCGCA
GTTGCGTAGCAGTTGAGTTTTGCTGGTTAGCTGTTAAGGT
GGCGTGTTGCGGTGCAGAGTGCTTGGCTGTTTCCAGTATT
CTCCTGATTGCTCCTGTGTAACGCCCCGATTTGTTTAAAT
TTGGCTGCTGCGTTTTTATTTGCAGAAACATCTTGTGCAA
GTCTTTTTATGAATATTCATAATGCAGATGTCTGAGCTTA
ACTCATATCCACAATAGTTCCATCATTCAACATGCTCAAT
TTGTAGTAATTTCCATGTGAGTGGTAATAAAGGTTTCCTT
TGTGTATACCTAATTCTTTACTGGTCTGTCAGTGTCTCTT
ATGATGTTTGATGTAAACGCGCAAATTAAAAGCCTCCATA
ACT

Related Transcripts

Transcripts related to srsf2a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	srsf2a-202 (1) Ensembl	Ensembl	582 nt	Select Tool ZFIN BLAST
aberrant processed transcript	srsf2a-205 (1) Ensembl	Ensembl	567 nt	Select Tool ZFIN BLAST
aberrant processed transcript	srsf2a-206	Ensembl	603 nt
aberrant processed transcript	srsf2a-208 (1) Ensembl	Ensembl	908 nt	Select Tool ZFIN BLAST
mRNA	srsf2a-201 (1) Ensembl	Ensembl	1,776 nt	Select Tool ZFIN BLAST
mRNA	srsf2a-204 (1) Ensembl	Ensembl	1,151 nt	Select Tool ZFIN BLAST
mRNA	srsf2a-207 (1) Ensembl	Ensembl	855 nt	Select Tool ZFIN BLAST
mRNA	srsf2a-209 (1) Ensembl	Ensembl	707 nt	Select Tool ZFIN BLAST
mRNA	srsf2a-211 (1) Ensembl	Ensembl	788 nt	Select Tool ZFIN BLAST
ncRNA	srsf2a-002 (1) Ensembl	Ensembl	1,024 nt	Select Tool ZFIN BLAST
ncRNA	srsf2a-010 (1) Ensembl	Ensembl	636 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations