Transcript

msh3-202

ID
ZDB-TSCRIPT-090929-22813
Name
msh3-202 Nomenclature History
Previous Names
  • msh3-001
  • dkey-1o2.7-001
  • ottdart00000035253
  • si:dkey-1o2.7-001
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000159571 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000159571.2|gene_biotype:protein_coding|ENSDARG00000063276.9 transcript_biotype:protein_coding gene_symbol:msh3 cdna chromosome:GRCz11:5:51248784:51439446:1
ATCAACGCGCCAACCCGATCAGCTGCAGCAAAGCTGTAGT
CTCTCTTGGAGACTATTTTTAATCATAAGAGTTTTGGCCG
GTTTTCAAACAAGCTCCTGTTGCAGACCAAACGGTAAAGA
TCTGATATCGTTAATGTAGTAAAATGCACACAGCTGTCAG
ACGCGTGTCTGCCTCCAAATCCTCCAAGAAATCCAGCACT
CAGACAACTATCAGCAGGTTCTTCACTAATGCAAGCGATC
GGGCTCAACCAACTGAGCAGATTAACTGTCAAGACCGACG
CCATGAGGGCAGAGGGAAGAAGAGGTTGTCTGATGGAGGA
GCATCCACAGATAAACGAGCCAAACTCTCGGTCAGCGTGG
AGCAGGAGAGGGATGAGGAGCTCACAGTGACCCCCAGCAC
CTTAGGTAAGACGGTGTCCTCTAAAGTCAGTATCAGCCAT
GCCACCCTGACCAGACTTAAAGACTTCAGCTGCCCAGGGA
GCTCAGATTCAGTGATGGAGTTGGAGCCTTCACATTCGGG
AAAAGCTGAAATTTCTGCCTCACAGCAACATAATGTTATT
ATGCATAACGAAATGGTTGAAGAGTTCAAAGAAGAGCCCA
TTAAGGTTAAACAGGAGTTCTCCTTTAGTCAGTACGCTAA
GAATACTGGAAACAGGAAAAGTTTAGAAGAGCCTTCTGTT
TCCAACAGGAGAACCAAGACCATTTACACTCCTCTAGAAG
AACAGTACATGGAGATAAAAAAGCAGCATGTGGACACAGT
GCTTTGCGTCGAGTGTGGGTATAAATACAGGTTCTTCGGC
GAGGATGCAGAGATTGCTGCAAAGGAACTCAATATCACTT
GTCATCTGGACCATAACTTCATGACAGCCAGCATCCCTAC
TCATCGACTGTTTGTGCATGTTCGTCGACTAGTTTCTCAG
GGCTACAAGGTTGGTGTAGTGAAGCAGACCGAAACTACAG
CCATCAAAGCGTCCAGCGCTAACAAAAGTTCACTCTTTTC
ACGCCAGCTACATGCGCTTTACACAAAGTCCACACTTGTG
GGAGAAGATGTGAATCCTCTGCTAAAGCTGGGAGATTTGG
AGCAAGCTGAAGATGTGGTGCAGGACAGTGGAAACAACTA
TCTAATGTGTGTGAGCGAGAGTTTTGACAAACAGAGCAAG
GAGCTGACCGTAGGAATGGTGGTGGTCCAGCCAAGCATTG
GGGATGTGATGGTGGATTGTTTTAAAGATAATATGAGCCA
TTCAGAGCTGGAATCCAGAATACTGAGAATACAACCTGTA
GAGATCCTGGTACCTTCAGATCTGTCAGAGACCACCGAGA
GGTTATTACGCAACATCGCTCTCTCCAGTGTCCAAGCAGA
TGACAGAATTCGCATTGAGAAACGAGAAAGCGCCATGTTT
GAATACCCAACTGCACTGAGCATAATCAAAGACTTCTACA
GAGGCGGCCCTCATTCAGCTGCAAGAAATCATGAAAAGGG
TTCCTACTCTATTTGCATGGGTCTGGAGAGCCCAATTATC
TGCTGTCTTGGTCCTGTGATCCAATATCTGACTGAGTTTA
AGTTAGAGAAGATTTTACTGTGTTCCAGCTCGTTTAAGCG
GCTATCAAGTGATCCTGACCATATGCTGCTCAGTGCTGCT
ACTATGAAGAACCTGGAGATTTTGTGCAACCAGACCACAG
GTTCAGTAAAAGGCAGTCTGCTCTGGGTTCTGGATCACAC
TCAGACTCTATTTGGGAAGAGACTGTTGAGAAAGTGGGTG
AGCCAGCCGCTCAAGTCTGTCATTGATATTCAAGCTCGAC
AAGAGGCAGTTGCTGAAATATTGTCTTCTGAATCCAGTGT
CCTTCCCTCTATCCAGTCTTTGCTAACTCGTCTACCCGAC
CTCGAGAGAGGACTTTGCAGTATCTACCACAAGAGAGAAT
TTTACCTCATCATTAGCTCTCTCTCTCGCCTGAATGTTGA
GCTTCAAGCCCTCATGCCTGCCATCCAATCACAGCTCAGC
TCTCCCCTTTTGAAGACCCTCCTGCTGGACACACCTCAGC
TTTTAAGCCCCGCCCACAACTTCTTAAAAGTGCTGAATGA
GAAAGCGGCAAAGACAGGCAATAAAACAGAAATGTTTGTG
GACCTGACTGACTTCCCAGTGATCCGGAAAACAAAAGAGG
AGATTGAGAGTGTTTTGTTGGACATAATGGAGCACCGGCG
AGAAGTTCGCCTGTTGTTAAAAAACCCATCTTTGGACTAC
ACCACAGTGTCTGGCCAACAGTTTCTCATTGAGGTGAAGA
ACAGTATGTTGTCCATAGTTCCAGCAGACTGGGTGAAAAT
CAGCAGCACTAAGGTTTTTGGCCGCTATCACACTCCATTC
ATCGTGGAGAAGCACCGGCGCCTTCAGCAATTACGCGAAC
AGCTGGTTATTGACTGCAATCACGAGTGGATCAACTTTCT
TCAGCTATTTGGGGACCATTACTACATCCTGAGGAAAGCA
GTGTGTCACCTAGCAACCATGGACTGCCTCTTCTCCTTGG
CCCAAGTTGCTAAAGAAAATAATTACTGCAGGCCAGAGGT
TCTTGAGGAGAAAAGTCAGATTTTGATCACAGCAGGGAAG
CATCCTGTCATCACTTCGCTGATGGGAGATCAGGATCAGT
ATGTCCCCAATGACACTCACTTACAGGGGGACGGCAAGCG
AGCCATGATCATCACCGGGCCCAACATGGGTGGCAAGAGC
TCCTACATTCGACAGGTTGCCCTGGTGACCATCATGGCAC
AGCTGGGCTCCTTTGTTCCTGCACGAGAGGCGTCAGTGGG
CATTGTGGATGGTATATATGTCAGAATGGGAGCATCTGAC
AACATCTCCAGAGGCAGAAGCACCTTTATGGAGGAGCTTC
TGGAAACGTCAGATGTTTTGGCTTGTGCCACATCCCGTTC
CCTGGTCATCCTGGATGAGTTGGGTCGAGGCACCAGCACT
CACGACGGCATTGCCATTGCCTACGCCACGCTGGAGTCCT
TCATCAGAGAGGTGAGGTGTATGACGCTGTTTGTGACCCA
CTACCCTCCTTTGTGCGAACTGGAGCATTTGTACCCACAG
CATGTGGGGAATTACCACATGGCTTTCCTGCTCAATGAGC
CGGAGAGCACTTCTGATGAGGAGGAGGCTCAGCCAGAGTT
CATCACATTTCTCTATCAGCTGATTGAAGGCGCAGCCGCC
AGGAGCTACGGGCTAAATGTAGCGCGTCTGGCTGAAATCC
CAGAGTCCATCCTGAGGACTGCTGCATTCAAATCCAAGGA
GTTGGAGGCTCTCGTGAACAGCCGGAGGAAAATGGTGAGA
CTGTTATCTGATGCCTGGAGTATCATCGACACGGAAACAC
TGCTGGACTGGAGAAAGCGTAGTCATTAATAATAGCATGT
TGGTACTGTAATTGCCTATAGGATGATGCAAAAAAACATT
CAAACCATGTATTTAAATAGAGTACTCCATATACACTGTA
AAAAATATCTGGTAATGAACTGTTTCTGTATTTTGTTTGT
GTTTGTGAATTGTATTATGGGACCTTGATCGACTTTTGAT
GTTGAAAATTCATGATAATTCATGTTTATAAAAGTCAGTT
TTTCTAAATGTTTAAGGTTAAAAGTTGTTGGAAGAAAGAT
CAAGGTCCCATTATGCAATTCAAAAGCATTAATAAACAGG
GAAAAATGAAATCATGAACCACAAAATGCGAAAAACTGCT
CATTTATGGATATTTTTTCAACAGGATCTGTTTTAGCTTT
ACACGAAAACAAGACAACTTGTAACTTTTAATGTGTTGTC
TTTGTATAGATACTTGCAGTATATCAAGGTACTTTGAACA
GAACATTTTCTGAAGATGTGCTTTATTTGTATCTGTTTGG
CAAAAGAACAAAATGATGCATTTTTTCAAAGATTGTAAGT
GTAACATGTTATTTACATTGATTAAATTGTAAATCAAAGA
TCACCATTGTAACATTTTGTTGTCATTTACTTACACTCGT
TTATACCTTA

OTTDART00000035253 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000035253|OTTDARG00000026521|ZDB-GENE-060526-307 msh3|OTTDARP00000028350 msh3-001 LG_none CR381619.10,CR388055.6 Danio rerio protein_coding KNOWN, 4010 bp
ATCAACGCGCCAACCCGATCAGCTGCAGCAAAGCTGTAGT
CTCTCTTGGAGACTATTTTTAATCATAAGAGTTTTGGCCG
GTTTTCAAACAAGCTCCTGTTGCAGACCAAACGGTAAAGA
TCTGATATCGTTAATGTAGTAAAATGCACACAGCTGTCAG
ACGCGTGTCTGCCTCCAAATCCTCCAAGAAATCCAGCACT
CAGACAACTATCAGCAGGTTCTTCACTAATGCAAGCGATC
GGGCTCAACCAACTGAGCAGATTAACTGTCAAGACCGACG
CCATGAGGGCAGAGGGAAGAAGAGGTTGTCTGATGGAGGA
GCATCCACAGATAAACGAGCCAAACTCTCGGTCAGCGTGG
AGCAGGAGAGGGATGAGGAGCTCACAGTGACCCCCAGCAC
CTTAGGTAAGACGGTGTCCTCTAAAGTCAGTATCAGCCAT
GCCACCCTGACCAGACTTAAAGACTTCAGCTGCCCAGGGA
GCTCAGATTCAGTGATGGAGTTGGAGCCTTCACATTCGGG
AAAAGCTGAAATTTCTGCCTCACAGCAACATAATGTTATT
ATGCATAACGAAATGGTTGAAGAGTTCAAAGAAGAGCCCA
TTAAGGTTAAACAGGAGTTCTCCTTTAGTCAGTACGCTAA
GAATACTGGAAACAGGAAAAGTTTAGAAGAGCCTTCTGTT
TCCAACAGGAGAACCAAGACCATTTACACTCCTCTAGAAG
AACAGTACATGGAGATAAAAAAGCAGCATGTGGACACAGT
GCTTTGCGTCGAGTGTGGGTATAAATACAGGTTCTTCGGC
GAGGATGCAGAGATTGCTGCAAAGGAACTCAATATCACTT
GTCATCTGGACCATAACTTCATGACAGCCAGCATCCCTAC
TCATCGACTGTTTGTGCATGTTCGTCGACTAGTTTCTCAG
GGCTACAAGGTTGGTGTAGTGAAGCAGACCGAAACTACAG
CCATCAAAGCGTCCAGCGCTAACAAAAGTTCACTCTTTTC
ACGCCAGCTACATGCGCTTTACACAAAGTCCACACTTGTG
GGAGAAGATGTGAATCCTCTGCTAAAGCTGGGAGATTTGG
AGCAAGCTGAAGATGTGGTGCAGGACAGTGGAAACAACTA
TCTAATGTGTGTGAGCGAGAGTTTTGACAAACAGAGCAAG
GAGCTGACCGTAGGAATGGTGGTGGTCCAGCCAAGCATTG
GGGATGTGATGGTGGATTGTTTTAAAGATAATATGAGCCA
TTCAGAGCTGGAATCCAGAATACTGAGAATACAACCTGTA
GAGATCCTGGTACCTTCAGATCTGTCAGAGACCACCGAGA
GGTTATTACGCAACATCGCTCTCTCCAGTGTCCAAGCAGA
TGACAGAATTCGCATTGAGAAACGAGAAAGCGCCATGTTT
GAATACCCAACTGCACTGAGCATAATCAAAGACTTCTACA
GAGGCGGCCCTCATTCAGCTGCAAGAAATCATGAAAAGGG
TTCCTACTCTATTTGCATGGGTCTGGAGAGCCCAATTATC
TGCTGTCTTGGTCCTGTGATCCAATATCTGACTGAGTTTA
AGTTAGAGAAGATTTTACTGTGTTCCAGCTCGTTTAAGCG
GCTATCAAGTGATCCTGACCATATGCTGCTCAGTGCTGCT
ACTATGAAGAACCTGGAGATTTTGTGCAACCAGACCACAG
GTTCAGTAAAAGGCAGTCTGCTCTGGGTTCTGGATCACAC
TCAGACTCTATTTGGGAAGAGACTGTTGAGAAAGTGGGTG
AGCCAGCCGCTCAAGTCTGTCATTGATATTCAAGCTCGAC
AAGAGGCAGTTGCTGAAATATTGTCTTCTGAATCCAGTGT
CCTTCCCTCTATCCAGTCTTTGCTAACTCGTCTACCCGAC
CTCGAGAGAGGACTTTGCAGTATCTACCACAAGAGAGAAT
TTTACCTCATCATTAGCTCTCTCTCTCGCCTGAATGTTGA
GCTTCAAGCCCTCATGCCTGCCATCCAATCACAGCTCAGC
TCTCCCCTTTTGAAGACCCTCCTGCTGGACACACCTCAGC
TTTTAAGCCCCGCCCACAACTTCTTAAAAGTGCTGAATGA
GAAAGCGGCAAAGACAGGCAATAAAACAGAAATGTTTGTG
GACCTGACTGACTTCCCAGTGATCCGGAAAACAAAAGAGG
AGATTGAGAGTGTTTTGTTGGACATAATGGAGCACCGGCG
AGAAGTTCGCCTGTTGTTAAAAAACCCATCTTTGGACTAC
ACCACAGTGTCTGGCCAACAGTTTCTCATTGAGGTGAAGA
ACAGTATGTTGTCCATAGTTCCAGCAGACTGGGTGAAAAT
CAGCAGCACTAAGGTTTTTGGCCGCTATCACACTCCATTC
ATCGTGGAGAAGCACCGGCGCCTTCAGCAATTACGCGAAC
AGCTGGTTATTGACTGCAATCACGAGTGGATCAACTTTCT
TCAGCTATTTGGGGACCATTACTACATCCTGAGGAAAGCA
GTGTGTCACCTAGCAACCATGGACTGCCTCTTCTCCTTGG
CCCAAGTTGCTAAAGAAAATAATTACTGCAGGCCAGAGGT
TCTTGAGGAGAAAAGTCAGATTTTGATCACAGCAGGGAAG
CATCCTGTCATCACTTCGCTGATGGGAGATCAGGATCAGT
ATGTCCCCAATGACACTCACTTACAGGGGGACGGCAAGCG
AGCCATGATCATCACCGGGCCCAACATGGGTGGCAAGAGC
TCCTACATTCGACAGGTTGCCCTGGTGACCATCATGGCAC
AGCTGGGCTCCTTTGTTCCTGCACGAGAGGCGTCAGTGGG
CATTGTGGATGGTATATATGTCAGAATGGGAGCATCTGAC
AACATCTCCAGAGGCAGAAGCACCTTTATGGAGGAGCTTC
TGGAAACGTCAGATGTTTTGGCTTGTGCCACATCCCGTTC
CCTGGTCATCCTGGATGAGTTGGGTCGAGGCACCAGCACT
CACGACGGCATTGCCATTGCCTACGCCACGCTGGAGTCCT
TCATCAGAGAGGTGAGGTGTATGACGCTGTTTGTGACCCA
CTACCCTCCTTTGTGCGAACTGGAGCATTTGTACCCACAG
CATGTGGGGAATTACCACATGGCTTTCCTGCTCAATGAGC
CGGAGAGCACTTCTGATGAGGAGGAGGCTCAGCCAGAGTT
CATCACATTTCTCTATCAGCTGATTGAAGGCGCAGCCGCC
AGGAGCTACGGGCTAAATGTAGCGCGTCTGGCTGAAATCC
CAGAGTCCATCCTGAGGACTGCTGCATTCAAATCCAAGGA
GTTGGAGGCTCTCGTGAACAGCCGGAGGAAAATGGTGAGA
CTGTTATCTGATGCCTGGAGTATCATCGACACGGAAACAC
TGCTGGACTGGAGAAAGCGTAGTCATTAATAATAGCATGT
TGGTACTGTAATTGCCTATAGGATGATGCAAAAAAACATT
CAAACCATGTATTTAAATAGAGTACTCCATATACACTGTA
AAAAATATCTGGTAATGAACTGTTTCTGTATTTTGTTTGT
GTTTGTGAATTGTATTATGGGACCTTGATCGACTTTTGAT
GTTGAAAATTCATGATAATTCATGTTTATAAAAGTCAGTT
TTTCTAAATGTTTAAGGTTAAAAGTTGTTGGAAGAAAGAT
CAAGGTCCCATTATGCAATTCAAAAGCATTAATAAACAGG
GAAAAATGAAATCATGAACCACAAAATGCGAAAAACTGCT
CATTTATGGATATTTTTTCAACAGGATCTGTTTTAGCTTT
ACACGAAAACAAGACAACTTGTAACTTTTAATGTGTTGTC
TTTGTATAGATACTTGCAGTATATCAAGGTACTTTGAACA
GAACATTTTCTGAAGATGTGCTTTATTTGTATCTGTTTGG
CAAAAGAACAAAATGATGCATTTTTTCAAAGATTGTAAGT
GTAACATGTTATTTACATTGATTAAATTGTAAATCAAAGA
TCACCATTGTAACATTTTGTTGTCATTTACTTACACTCGT
TTATACCTTA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations