Transcript

shoc2-201

ID
ZDB-TSCRIPT-090929-2254
Name
shoc2-201 Nomenclature History
Previous Names
  • shoc2-001
  • si:ch211-197i12.3-001
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000059882 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000059882.5|gene_biotype:protein_coding|ENSDARG00000040853.8 transcript_biotype:protein_coding gene_symbol:shoc2 cdna chromosome:GRCz11:22:29596646:29640181:-1
AGAGTGCCGTTAGGCGGATGACAGTTTGTTTTCACAGAGG
GCCTGTCTGAAGAGAACAACGAGCTTTTACACCCCCAGAC
ACGAGAATTTAACCGCTTCTCGTCAAGATGAGACGGCTTA
TTCCAAAATCCAAAGGATGTGAATCCCGGCGACCCGACTG
TGTAAAACAGCTCTAGTCAAGCCAAGACAAAGAGTGGAGT
TAAAACAAGCATGAGGCTGGTGGCCTCCACACCAACTACA
GCAAACACGCTTCACCCCAATGGAGTTTTAACCCCTGCAG
GAGTACAGACTGCCTCGGTGAAGGAAAACAGGTATGTATG
AGCACACACTGATATAGCAACCCCTCCCTTTGGTTCTGCC
CTCGAACATCGAACAAAATACAAGAGCGAGAGAACAGAGA
GATAAAACTGAGGGTCCCATGTGCCATTGGACTGCGGGGC
TTTCGCCATGAGCAGTACTCTGGGCAAAGATAAAGACTCT
AAGGAGAGGGAACCCAAAGCTGAAGGGAAATCCAAAACCA
AAGGGAAAGATGCCAAAGATGGGAAGAAAGACACAAGCGG
TGCTTCGCCCGCGGTGGCCTTTACCTTGGACAGCACGATA
AAGCGGCCCAATCCGCCGCCCAGCACGCGCAAAAAATCCA
GCAATGCCGAGGTCATCAAGGAGCTGAACAAGTGCCGCGA
GGAGAATTCGATGCGCCTGGATTTGTCCAAGAGATCCATC
CATCTGTTGCCCTCGTCCATCAAGGAGCTGACCCAGCTGA
CCGAGCTCTACCTGTACAGCAACAAGCTGCAAAGCCTGCC
GCCCGAGGTGGGATGCCTGTCAGGATTGGTGACGCTGGCG
CTCAGTGAGAACTCTCTGACCAGCCTACCTGACTCGCTGG
ACAACCTGAAGAAGCTGCGGATGCTCGACCTGCGGCATAA
CAAGCTGCGGGAGATCCCGGCTGTGGTGTACCGCGTCAGC
TCCCTCACCACACTCTACCTGCGCTTCAACCGCATCACCA
CCGTAGAGAAGGACATCAAGAATCTGTCCAAACTCACAAT
GCTGAGCATCCGAGAGAACAAGATTAAACAGCTGCCCGCA
GAGATCGGTGAGCTCTGTAACTTGATCACGCTGGATGTAG
CCCACAACCAGTTGGAGCACCTTCCTAAAGAGATTGGAAA
TTGCACTCAGATCACCAACCTTGACCTGCAGCACAATGAT
CTTCTCGATCTGCCTGAGACTATAGGTAACTTGGCAAGTA
TAAACCGTCTAGGTTTGAGGTATAACCGCCTATCAGCGAT
CCCTCGATCTTTAGCAAAGTGCAGAGAGCTGGAAGAGCTC
AACCTTGAAAACAACAACATCTCGGTTTTACCAGAGGGGC
TTCTCTCCAGTCTGGTGAACCTGACAAGTCTGACGCTGGC
GCGAAACTGTTTCCAGTCTTACCCAGTGGGCGGCCCGTCC
CAGTTTTCCACCATCTATTCTCTCAACATGGAGCACAACC
GTATCAACAAGATCCCTTTTGGCATTTTCTCTCGAGCAAA
AGTGCTTAGCAAGCTCAATATGAAGGACAACCAGCTAACA
TCTCTGCCACTGGATTTTGGGACGTGGACCAGTATGGTGG
AGTTGAATCTGGCAACAAACCAGCTTACTAAGATTCCAGA
GGACATCTGCGGCCTTGTGTCTTTAGAGATGCTTACATTG
TCCAACAACCTGTTGAAAAAGTTGCCTTATGGGATTGGCA
ACTTAAGGAAACTACGAGAGCTTGATCTGGAGGAGAACAA
ACTGGAGTCTCTCCCTAATGAGATTGCCTACCTTAAGGAT
CTGCAGAAACTCGTATTGACCAATAATCAGCTGACAACTT
TGCCGAGAGGAATCGGTCACCTGACCAACCTGACGTACCT
GGGCTTGGGAGAGAACCTGCTGCAGCACCTTCCCGAGGAG
ATCGGCACATTGGAGAATCTGGAGGACCTGTACCTGAATG
ACAACCCCAACCTGCACAGTCTGCCATTCGAGCTGGCGCT
GTGCAGCAAACTGTCCATCATGAGCATAGAGAACTGCCCG
CTCAGCCACCTGCCGCCACAGATCGTCGCCGGAGGCCCTT
CCTTCATCATCCAGTTCCTCAAGATGCAGGGCCCCTACCG
CGCCATGGTCTGA

OTTDART00000012598 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000012598|OTTDARG00000010870|ZDB-GENE-050208-523 shoc2|OTTDARP00000010816 CH211-197I12.3-001 LG_ CR450802.8 Danio rerio protein_coding NOVEL, 2133 bp
AGAGTGCCGTTAGGCGGATGACAGTTTGTTTTCACAGAGG
GCCTGTCTGAAGAGAACAACGAGCTTTTACACCCCCAGAC
ACGAGAATTTAACCGCTTCTCGTCAAGATGAGACGGCTTA
TTCCAAAATCCAAAGGATGTGAATCCCGGCGACCCGACTG
TGTAAAACAGCTCTAGTCAAGCCAAGACAAAGAGTGGAGT
TAAAACAAGCATGAGGCTGGTGGCCTCCACACCAACTACA
GCAAACACGCTTCACCCCAATGGAGTTTTAACCCCTGCAG
GAGTACAGACTGCCTCGGTGAAGGAAAACAGGTATGTATG
AGCACACACTGATATAGCAACCCCTCCCTTTGGTTCTGCC
CTCGAACATCGAACAAAATACAAGAGCGAGAGAACAGAGA
GATAAAACTGAGGGTCCCATGTGCCATTGGACTGCGGGGC
TTTCGCCATGAGCAGTACTCTGGGCAAAGATAAAGACTCT
AAGGAGAGGGAACCCAAAGCTGAAGGGAAATCCAAAACCA
AAGGGAAAGATGCCAAAGATGGGAAGAAAGACACAAGCGG
TGCTTCGCCCGCGGTGGCCTTTACCTTGGACAGCACGATA
AAGCGGCCCAATCCGCCGCCCAGCACGCGCAAAAAATCCA
GCAATGCCGAGGTCATCAAGGAGCTGAACAAGTGCCGCGA
GGAGAATTCGATGCGCCTGGATTTGTCCAAGAGATCCATC
CATCTGTTGCCCTCGTCCATCAAGGAGCTGACCCAGCTGA
CCGAGCTCTACCTGTACAGCAACAAGCTGCAAAGCCTGCC
GCCCGAGGTGGGATGCCTGTCAGGATTGGTGACGCTGGCG
CTCAGTGAGAACTCTCTGACCAGCCTACCTGACTCGCTGG
ACAACCTGAAGAAGCTGCGGATGCTCGACCTGCGGCATAA
CAAGCTGCGGGAGATCCCGGCTGTGGTGTACCGCGTCAGC
TCCCTCACCACACTCTACCTGCGCTTCAACCGCATCACCA
CCGTAGAGAAGGACATCAAGAATCTGTCCAAACTCACAAT
GCTGAGCATCCGAGAGAACAAGATTAAACAGCTGCCCGCA
GAGATCGGTGAGCTCTGTAACTTGATCACGCTGGATGTAG
CCCACAACCAGTTGGAGCACCTTCCTAAAGAGATTGGAAA
TTGCACTCAGATCACCAACCTTGACCTGCAGCACAATGAT
CTTCTCGATCTGCCTGAGACTATAGGTAACTTGGCAAGTA
TAAACCGTCTAGGTTTGAGGTATAACCGCCTATCAGCGAT
CCCTCGATCTTTAGCAAAGTGCAGAGAGCTGGAAGAGCTC
AACCTTGAAAACAACAACATCTCGGTTTTACCAGAGGGGC
TTCTCTCCAGTCTGGTGAACCTGACAAGTCTGACGCTGGC
GCGAAACTGTTTCCAGTCTTACCCAGTGGGCGGCCCGTCC
CAGTTTTCCACCATCTATTCTCTCAACATGGAGCACAACC
GTATCAACAAGATCCCTTTTGGCATTTTCTCTCGAGCAAA
AGTGCTTAGCAAGCTCAATATGAAGGACAACCAGCTAACA
TCTCTGCCACTGGATTTTGGGACGTGGACCAGTATGGTGG
AGTTGAATCTGGCAACAAACCAGCTTACTAAGATTCCAGA
GGACATCTGCGGCCTTGTGTCTTTAGAGATGCTTACATTG
TCCAACAACCTGTTGAAAAAGTTGCCTTATGGGATTGGCA
ACTTAAGGAAACTACGAGAGCTTGATCTGGAGGAGAACAA
ACTGGAGTCTCTCCCTAATGAGATTGCCTACCTTAAGGAT
CTGCAGAAACTCGTATTGACCAATAATCAGCTGACAACTT
TGCCGAGAGGAATCGGTCACCTGACCAACCTGACGTACCT
GGGCTTGGGAGAGAACCTGCTGCAGCACCTTCCCGAGGAG
ATCGGCACATTGGAGAATCTGGAGGACCTGTACCTGAATG
ACAACCCCAACCTGCACAGTCTGCCATTCGAGCTGGCGCT
GTGCAGCAAACTGTCCATCATGAGCATAGAGAACTGCCCG
CTCAGCCACCTGCCGCCACAGATCGTCGCCGGAGGCCCTT
CCTTCATCATCCAGTTCCTCAAGATGCAGGGCCCCTACCG
CGCCATGGTCTGA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations