Transcript

efhc2-202

ID
ZDB-TSCRIPT-090929-20436
Name
efhc2-202 Nomenclature History
Previous Names
  • efhc2-002
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000142788 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000142788.3|gene_biotype:protein_coding|ENSDARG00000004204.11 transcript_biotype:nonsense_mediated_decay gene_symbol:efhc2 cdna chromosome:GRCz11:9:33758722:33781829:-1
TTACCGTGGCGAGCAGTTGTGCCGTCTGCGGCTGTCGTCC
AACTGAGGGAAAAATAACGTTAATTCGCTGATAATCATGG
CGTTACCAATGCTGCCTGGAAATTCAGTCAACAGAAACCT
TGGAAAAGACAAATTTCACAAGTCTCAGCATTTTGATTAT
TCAAATGGAGTAGCTATGATGGTTGGGACAGAGAAGCCGG
GCATTGGAGGAGATCTGCTCCTGGGACAGAGTGCAAGAGC
CAAATATTCACGGTTTCCAAAAGGAGAGGGCAGTGGTGCT
CCAGCATGGCTTGCCTTTGACAAACAGGTCCTGTGTTTTG
ATGCTTATTTCAATGAAGATGTTCCTCAAAGGAGGGAAGA
AAAATATAGAGTACGAAAGTGCAAGATTTACTTCTACCTG
GAGGATGACACCATACAAGTGGTGGAGCCAGAGTTCAAAA
ACAGTGGCATCCCACAAGGAACCCTGATTCGGCGCCACCG
CATTCCTCTACCAGCTCCTAAAGATGATTGTTTCTACAAT
GTGCACCATTTCAACATCAACCAGGAAGTCGTGTTTTATT
CCAGAAACTTTATGATCACAGACTGTGACCCTTTCACTCG
CAACTTTTTGATAAAAATGGGAGTCCGACTGAATCCTCCT
GCTTCCACACCAGCGGATCCCTATACTACCCTTCGACAAG
AGGCAAAGAACATGAAGCCACTGCGGCCGTATGAAAGACT
GGATACCCTGAAGCAGTTTTTAGAGCATGACCGCCAAGTC
CTGCGCTTCTACTGCTACTGGGATGATAGTGAGAGCATGT
TTGGAGACCCTAGAGAGCTGATCCTGCATTACTTCCTGGC
AGACGACACCATGGAAATGTACGAAGTTGTTCCTCCAAAC
TCTGGTCGAGACACTGTCCCTAAATTTCTGCACAGGGGCA
AGCTTCCCAAGCATGCTCCTATTCCCAAACGTCAGCCTGG
AGAAATTACAGACCGCACAGTCCTCAATGTATTTGGACCA
GTCGGACAAGGAGGACGCTACATTTTGGACAGCCTCAAAT
TTATTAGTCAATTGTTATGTAACTTTTTTCACTCACTGTT
TACAGACTGGAGCATTGGAAGAAGAGTTCTATAAAGACTC
TGATCTGACTATTGGAGCTGTCATTAATGTATGGGGTCGA
AGGGTGTTAATATGTGACTGCGACTACTTCACTAAAGAGT
ATTATCGCTCTAAATATGGGATTGAGGACTTCCCATCTAT
CTCATACAAGGCCTCACCTCCACCTAAACCAGCTAAGCAG
GTGCCACCCTACACTGGATTTGGATCTGAGGAGGATTCAC
TGTGTTCTTGCCAGGGTTTGCTGCCTAAACCCCCACAGAA
GGATTTCAAGAAGCTTATGGAGAAAGACAGGCAAGGTCTG
GTGAGCAACGTGCTGAGATTTGTGGGGAAAATGCTGACAG
ACAGTCCTGTCGACAAGGAACGTGTTTTTATCATATGCTT
CTACCTTACTGATGACACAATAGCTGTCTTTGAACCTCCA
CAGAGAAACTCAGGTGTGATCGGGGGTAAGTTCTTAGAGA
GGGGGCGAGTGAAGAAGCCAGGACAGGAGCTGTTTAAAAG
TGAGATGTCGGAGTATTTCACTGCTCAGGATTTGTATGTT
GGAGCTCATCTGCTTCTGAACAGTCAACCTTTCCAGCTGG
TGGATGCTGACGATTTTACATTCAGCTATATGGAGCAGCA
TGCAGATGAGTTCCCCAAGGCCAACATTGGCACCATCATT
AGCAAGGTAAAATCCATCAGTGAGGAACAGCAGAAGAAAG
TAAAACAGTTTTTCACCATGAGTGACCCAAGCAGCACTGG
CTCTCTTCCATATGAGTCATTCAGGACTCTGTTGGCAGAT
TTGGACGTGGAGTTGTCCGAACATGAGATCATGACACTGG
GTCGTGTTTATTCGGTGCGGCAGCAGCCAGAGGTGAACGT
GGGTCTCATGCTTGCTGTGGCTCAGGATCATCTGAAGAAG
AAAAACTTTGAGAAGTTCTCAGAAATGATCCAAGCTTTCA
CACATGAGGACCGGGACAGATGTGGCCAGCTCTCGTCTAA
AGAGGCCCGGATCATCTGTAAGGCTTTTCGACTGCCCCTG
TCTGATGACCTGCTAAGAGCCCTTCTGGAGAAGTTTGCAG
GCGAGTCAGAGAAGATTGACTATCACGCTTTTCTATCCGG
AATCAACTGGAGAGAAAACCCCGTCCCCGCTGTGCTTCCA
GAGGACACTGTAAAGTTTGACGCAGACTGGAGAGGAGAAG
CTCCAGAGCCTGCAGTGAAAACCATCAACTACTCGCTCTT
ACTGGAGGACGTCTTTGGCAGCGCCACAAACATTAATGAC
AGCTAAGAACGGCCTGATGGGATCCTCAAAAGCATGAGAG
AGGAAGTCAAGAAGTCTGCAGCACTTTGTGCACCGCATTG
ATTAAACTCACATTGTCG

OTTDART00000040271 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000040271|OTTDARG00000029363|ZDB-GENE-031001-10 efhc2|OTTDARP00000032189 efhc2-002 LG_ BX572627.5 Danio rerio protein_coding KNOWN, 2458 bp
TTACCGTGGCGAGCAGTTGTGCCGTCTGCGGCTGTCGTCC
AACTGAGGGAAAAATAACGTTAATTCGCTGATAATCATGG
CGTTACCAATGCTGCCTGGAAATTCAGTCAACAGAAACCT
TGGAAAAGACAAATTTCACAAGTCTCAGCATTTTGATTAT
TCAAATGGAGTAGCTATGATGGTTGGGACAGAGAAGCCGG
GCATTGGAGGAGATCTGCTCCTGGGACAGAGTGCAAGAGC
CAAATATTCACGGTTTCCAAAAGGAGAGGGCAGTGGTGCT
CCAGCATGGCTTGCCTTTGACAAACAGGTCCTGTGTTTTG
ATGCTTATTTCAATGAAGATGTTCCTCAAAGGAGGGAAGA
AAAATATAGAGTACGAAAGTGCAAGATTTACTTCTACCTG
GAGGATGACACCATACAAGTGGTGGAGCCAGAGTTCAAAA
ACAGTGGCATCCCACAAGGAACCCTGATTCGGCGCCACCG
CATTCCTCTACCAGCTCCTAAAGATGATTGTTTCTACAAT
GTGCACCATTTCAACATCAACCAGGAAGTCGTGTTTTATT
CCAGAAACTTTATGATCACAGACTGTGACCCTTTCACTCG
CAACTTTTTGATAAAAATGGGAGTCCGACTGAATCCTCCT
GCTTCCACACCAGCGGATCCCTATACTACCCTTCGACAAG
AGGCAAAGAACATGAAGCCACTGCGGCCGTATGAAAGACT
GGATACCCTGAAGCAGTTTTTAGAGCATGACCGCCAAGTC
CTGCGCTTCTACTGCTACTGGGATGATAGTGAGAGCATGT
TTGGAGACCCTAGAGAGCTGATCCTGCATTACTTCCTGGC
AGACGACACCATGGAAATGTACGAAGTTGTTCCTCCAAAC
TCTGGTCGAGACACTGTCCCTAAATTTCTGCACAGGGGCA
AGCTTCCCAAGCATGCTCCTATTCCCAAACGTCAGCCTGG
AGAAATTACAGACCGCACAGTCCTCAATGTATTTGGACCA
GTCGGACAAGGAGGACGCTACATTTTGGACAGCCTCAAAT
TTATTAGTCAATTGTTATGTAACTTTTTTCACTCACTGTT
TACAGACTGGAGCATTGGAAGAAGAGTTCTATAAAGACTC
TGATCTGACTATTGGAGCTGTCATTAATGTATGGGGTCGA
AGGGTGTTAATATGTGACTGCGACTACTTCACTAAAGAGT
ATTATCGCTCTAAATATGGGATTGAGGACTTCCCATCTAT
CTCATACAAGGCCTCACCTCCACCTAAACCAGCTAAGCAG
GTGCCACCCTACACTGGATTTGGATCTGAGGAGGATTCAC
TGTGTTCTTGCCAGGGTTTGCTGCCTAAACCCCCACAGAA
GGATTTCAAGAAGCTTATGGAGAAAGACAGGCAAGGTCTG
GTGAGCAACGTGCTGAGATTTGTGGGGAAAATGCTGACAG
ACAGTCCTGTCGACAAGGAACGTGTTTTTATCATATGCTT
CTACCTTACTGATGACACAATAGCTGTCTTTGAACCTCCA
CAGAGAAACTCAGGTGTGATCGGGGGTAAGTTCTTAGAGA
GGGGGCGAGTGAAGAAGCCAGGACAGGAGCTGTTTAAAAG
TGAGATGTCGGAGTATTTCACTGCTCAGGATTTGTATGTT
GGAGCTCATCTGCTTCTGAACAGTCAACCTTTCCAGCTGG
TGGATGCTGACGATTTTACATTCAGCTATATGGAGCAGCA
TGCAGATGAGTTCCCCAAGGCCAACATTGGCACCATCATT
AGCAAGGTAAAATCCATCAGTGAGGAACAGCAGAAGAAAG
TAAAACAGTTTTTCACCATGAGTGACCCAAGCAGCACTGG
CTCTCTTCCATATGAGTCATTCAGGACTCTGTTGGCAGAT
TTGGACGTGGAGTTGTCCGAACATGAGATCATGACACTGG
GTCGTGTTTATTCGGTGCGGCAGCAGCCAGAGGTGAACGT
GGGTCTCATGCTTGCTGTGGCTCAGGATCATCTGAAGAAG
AAAAACTTTGAGAAGTTCTCAGAAATGATCCAAGCTTTCA
CACATGAGGACCGGGACAGATGTGGCCAGCTCTCGTCTAA
AGAGGCCCGGATCATCTGTAAGGCTTTTCGACTGCCCCTG
TCTGATGACCTGCTAAGAGCCCTTCTGGAGAAGTTTGCAG
GCGAGTCAGAGAAGATTGACTATCACGCTTTTCTATCCGG
AATCAACTGGAGAGAAAACCCCGTCCCCGCTGTGCTTCCA
GAGGACACTGTAAAGTTTGACGCAGACTGGAGAGGAGAAG
CTCCAGAGCCTGCAGTGAAAACCATCAACTACTCGCTCTT
ACTGGAGGACGTCTTTGGCAGCGCCACAAACATTAATGAC
AGCTAAGAACGGCCTGATGGGATCCTCAAAAGCATGAGAG
AGGAAGTCAAGAAGTCTGCAGCACTTTGTGCACCGCATTG
ATTAAACTCACATTGTCG

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations