Gene

efhc2

ID
ZDB-GENE-031001-10
Name
EF-hand domain (C-terminal) containing 2
Symbol
efhc2 Nomenclature History
Previous Names
  • cb847 (1)
  • flj22843 (1)
  • zgc:152706
Type
protein_coding_gene
Location
Chr: 9 Mapping Details/Browsers
Description
Predicted to have calcium ion binding activity. Involved in multi-ciliated epithelial cell differentiation and specification of pronephric distal tubule identity. Predicted to colocalize with microtubule. Is expressed in several structures, including forerunner cell group; intermediate mesoderm; notochord; sensory system; and tail bud. Orthologous to human EFHC2 (EF-hand domain containing 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Barrodia et al., 2018
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
7 figures from Barrodia et al., 2018
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With efhc2 Human Ortholog
No data available
Associated With efhc2 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR002048 EF-hand domain
Domain IPR006602 DM10 domain
Family IPR040193 EF-hand domain-containing protein EFHC1/EFHC2/EFHB
Homologous_superfamily IPR011992 EF-hand domain pair
Domain Details Per Protein
Protein Length DM10 domain EF-hand domain EF-hand domain-containing protein EFHC1/EFHC2/EFHB EF-hand domain pair
UniProtKB:B8A5Q4 748
UniProtKB:Q32TF8 748
UniProtKB:A0A8M3AW60 591
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
aberrant processed transcript efhc2-202 (1) Ensembl 2,458 nt
mRNA efhc2-201 (1) Ensembl 2,433 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations