Transcript

lmo7a-004

ID

ZDB-TSCRIPT-090929-15381

Name

lmo7a-004 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

lmo7a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000145085 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000145085.2|gene_biotype:protein_coding|ENSDARG00000004930.11 transcript_biotype:retained_intron gene_symbol:lmo7a cdna chromosome:GRCz11:9:21931614:21939137:-1
ATTGTACTTTTCCCAGGCTGTGAGCGATTAACCAAAACAC
CTCTTCTCCCCTACAGGCACCAGGAGAGCAGCAGGAGGCT
CAAAAATGTTCTAATCACCATATATTGGTTGGGCAGAAAG
GCACATGCTGATCCATTTTATAATGGACCTTACCTAAAAC
TGAAGGCTTTCGAGGGATTACTTGGCACCACACTATATAA
GGCTCTAGAGGATTGCACATCACTGCGGGCCAGTGTGCCA
AACCGCTCTTATCCAGATAGCTGGTACTCAGAGAGAGAAG
AGCTCTTCCCGCTGCGGGCCGGACACAGGAGAGAAGACTC
TCTAGACAGCCTCAATTCGCTGGGCTCCAGGACCTATAGC
ACATCCTCAGACGCCACACTCAAAGGCAGCAGCGAGGGTT
GTGGCAGTGACCCTGAAGCAGATCTGAGCTTCACCATGGC
AGACAATAAGGAGTACCGCCGTTCACAGGTCATAGCACCT
AAGACTACTACTCAGTTCAATCAGTTTCTCCCATCACGGG
ACAAGCAGTCCGGCTATGTTCCAGCACCATTACGCAAGAA
ACGTGCAGAGCGAAATGAAGACAGCAGAAGAAGCTGGGCA
AGCCCTATGTTCACAGAAGATGACGGCACTTTCACTAGTC
CCAGTCCTGAAATGGCAGGTTCAGACTCTTCATCTTTGAC
CGGGTTGAAATCTCAGACAGCAGCCCACCAGGCTTCAGTT
TATGAGTATGAGAGCAGTGATTCAGATGCAGATCGACCGG
ATCCTGATGTGGTTCTAGATGACCTCGCTAGTCGTAGATT
TCACAGCCCTTCTCCTGTCGCTCCGACCAACTTTGCCTTA
CCCATGAGCCCACTGGAGGCAACTGCTGTCCCATGCACCA
CCAGACCCCATGTGCTCATCAGTAATGTGCCCCG

OTTDART00000034645 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000034645|OTTDARG00000026179|ZDB-GENE-030219-74 lmo7a|no_translation DKEY-57A22.10-004 LG_ CR536604.6 Danio rerio protein_coding NOVEL, 914 bp
ATTGTACTTTTCCCAGGCTGTGAGCGATTAACCAAAACAC
CTCTTCTCCCCTACAGGCACCAGGAGAGCAGCAGGAGGCT
CAAAAATGTTCTAATCACCATATATTGGTTGGGCAGAAAG
GCACATGCTGATCCATTTTATAATGGACCTTACCTAAAAC
TGAAGGCTTTCGAGGGATTACTTGGCACCACACTATATAA
GGCTCTAGAGGATTGCACATCACTGCGGGCCAGTGTGCCA
AACCGCTCTTATCCAGATAGCTGGTACTCAGAGAGAGAAG
AGCTCTTCCCGCTGCGGGCCGGACACAGGAGAGAAGACTC
TCTAGACAGCCTCAATTCGCTGGGCTCCAGGACCTATAGC
ACATCCTCAGACGCCACACTCAAAGGCAGCAGCGAGGGTT
GTGGCAGTGACCCTGAAGCAGATCTGAGCTTCACCATGGC
AGACAATAAGGAGTACCGCCGTTCACAGGTCATAGCACCT
AAGACTACTACTCAGTTCAATCAGTTTCTCCCATCACGGG
ACAAGCAGTCCGGCTATGTTCCAGCACCATTACGCAAGAA
ACGTGCAGAGCGAAATGAAGACAGCAGAAGAAGCTGGGCA
AGCCCTATGTTCACAGAAGATGACGGCACTTTCACTAGTC
CCAGTCCTGAAATGGCAGGTTCAGACTCTTCATCTTTGAC
CGGGTTGAAATCTCAGACAGCAGCCCACCAGGCTTCAGTT
TATGAGTATGAGAGCAGTGATTCAGATGCAGATCGACCGG
ATCCTGATGTGGTTCTAGATGACCTCGCTAGTCGTAGATT
TCACAGCCCTTCTCCTGTCGCTCCGACCAACTTTGCCTTA
CCCATGAGCCCACTGGAGGCAACTGCTGTCCCATGCACCA
CCAGACCCCATGTGCTCATCAGTAATGTGCCCCG

Related Transcripts

Transcripts related to lmo7a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	lmo7a-203 (1) Ensembl	Ensembl	625 nt	Select Tool ZFIN BLAST
mRNA	lmo7a-201 (1) Ensembl	Ensembl	6,323 nt	Select Tool ZFIN BLAST
mRNA	lmo7a-202 (1) Ensembl	Ensembl	812 nt	Select Tool ZFIN BLAST
mRNA	lmo7a-204 (1) Ensembl	Ensembl	1,052 nt	Select Tool ZFIN BLAST
mRNA	lmo7a-210 (1) Ensembl	Ensembl	663 nt	Select Tool ZFIN BLAST
mRNA	lmo7a-212 (1) Ensembl	Ensembl	754 nt	Select Tool ZFIN BLAST
ncRNA	lmo7a-003 (1) Ensembl	Ensembl	962 nt	Select Tool ZFIN BLAST
ncRNA	lmo7a-004	Ensembl	914 nt
ncRNA	lmo7a-005 (1) Ensembl	Ensembl	733 nt	Select Tool ZFIN BLAST
ncRNA	lmo7a-007 (1) Ensembl	Ensembl	824 nt	Select Tool ZFIN BLAST
ncRNA	lmo7a-008 (1) Ensembl	Ensembl	853 nt	(2 sequences)
ncRNA	lmo7a-012 (1) Ensembl	Ensembl	895 nt	Select Tool ZFIN BLAST
ncRNA	lmo7a-013 (1) Ensembl	Ensembl	853 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations