Transcript

usf1-207

ID
ZDB-TSCRIPT-090929-12060
Name
usf1-207 Nomenclature History
Previous Names
  • usf1-002
  • zgc:56547-002
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000143643 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000143643.4|gene_biotype:protein_coding|ENSDARG00000041689.9 transcript_biotype:nonsense_mediated_decay gene_symbol:usf1 cdna chromosome:GRCz11:15:21252579:21261192:1
GCAGTTAAGTACGTTTCCTCTGGCTGCGGCTACTGTTGTA
AACAAGACGCCTCGAGATCAGTAAACGTTCAGATTTTATA
AGACAACAAGAAGTGGTAACACAAATTTTACTTGTTACAT
ACTGACAGTGGAGATGAAAGGACAACCGAAAAGTTCTGAA
CCTGATGTCAGTGTTCCAGTCATTGAAGAAGGGGCAGTTG
CTACTGCAGAAGACCCATCAGCAATCACAACTATTCAATC
TGCTTCTACGTTTTCCACGGACCAGCCGATTAAATACCTT
TTCAAGACGGAGGGAGCTGGGGGGCAGGTTACATACCGAG
TAATCCAGGTTGCAGATGGACAGCTAGAGGCTCAACCTGA
TGGTACAACAGCTGTTAGTGTAGTGACTGGGTTTCCTGCC
ACAACACAGCCGGTTACGCAGGCTGTTTTCTCTCAGTCAG
AAGGCTTGGAGGGAGATGGCACAGAAACCCATTACACATA
TTATCCTGCTACTATCTCAGATGCTACTGCAGGCACAATG
GTGACAGGTGTTCAGGCCTCAGATGCTCTGCTCAGTCAGA
GTGCTTCTGCAGGTCAGTTGTATGTTATGATGTCCCCACA
GGAGGTCCTTACCGGAGCCAACCAGAGGTCTATTGCACCT
CGTACACAAGCTTACAATGCCAAATCGGAGGGTCCGAGAA
CTTCAAGAGATGAGAAAAGACGAGCTCAGCACAATGAAGT
TGAGCGAAGAAGAAGAGACAAAATCAATAACTGGATTGTT
CAGCTCTCAAAAACAATTCCAGACTGCACCATCGACTCCA
CTAAAACTGGACAGGCATAGTAAAGGTGGGATCCTATCAA
AGGCCTGTGATTACATTCAAGAGCTTCGACAAAGTAACAG
CCGGTTAGGAGATGAGCTGAACAGCATTGAGAGGTTGAGG
ATGGATAACCAGCTGTTACGACAAGAGGTTGAAGACTGGA
AATCTAAGAATCAGATATTGAGGAACCAGCTCCGGCAGCA
TGGCATAGTTGCAGCAGCAAGTGCAGATCCTCAGTAAAGA
ATTTGTCATTTGTTTTTATTTATCTTGAACAAGAGGACGC
GTGTAATGCAGTATTCAGTATATTGGTGATGATTCTTCAT
CAGGATCTTGCCTTATGTACATATTTCTTTTTCTTTCTTT
GTGCACCTCTTCATACTTTCATGTAATAAAGCATTCTTTT
TGTATGTGTCATGACAGGTCAGATGAATTTGTTGATTTTG
TACTTTTACATCTATTGTTTGTGGAATAATATGTTAACTT
TTTGAATGCATTTTCAAATATTTTGTACATTGAAAAGCGA
TTTTCAGTTTTGTCTGAATGGTAAGCATGTCAAATAACTG
CCTAATATTTAACAGTTCGCAACATGGTATGATATTATAG
TAGATTTCATTATGCAGATTGATGAAATAAATAGACGACT
TCAATTTCAA

OTTDART00000029680 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000029680|OTTDARG00000022885|ZDB-GENE-040426-1072 usf1|OTTDARP00000024219 usf1-002 LG_ BX663520.9 Danio rerio protein_coding KNOWN, 1450 bp
GCAGTTAAGTACGTTTCCTCTGGCTGCGGCTACTGTTGTA
AACAAGACGCCTCGAGATCAGTAAACGTTCAGATTTTATA
AGACAACAAGAAGTGGTAACACAAATTTTACTTGTTACAT
ACTGACAGTGGAGATGAAAGGACAACCGAAAAGTTCTGAA
CCTGATGTCAGTGTTCCAGTCATTGAAGAAGGGGCAGTTG
CTACTGCAGAAGACCCATCAGCAATCACAACTATTCAATC
TGCTTCTACGTTTTCCACGGACCAGCCGATTAAATACCTT
TTCAAGACGGAGGGAGCTGGGGGGCAGGTTACATACCGAG
TAATCCAGGTTGCAGATGGACAGCTAGAGGCTCAACCTGA
TGGTACAACAGCTGTTAGTGTAGTGACTGGGTTTCCTGCC
ACAACACAGCCGGTTACGCAGGCTGTTTTCTCTCAGTCAG
AAGGCTTGGAGGGAGATGGCACAGAAACCCATTACACATA
TTATCCTGCTACTATCTCAGATGCTACTGCAGGCACAATG
GTGACAGGTGTTCAGGCCTCAGATGCTCTGCTCAGTCAGA
GTGCTTCTGCAGGTCAGTTGTATGTTATGATGTCCCCACA
GGAGGTCCTTACCGGAGCCAACCAGAGGTCTATTGCACCT
CGTACACAAGCTTACAATGCCAAATCGGAGGGTCCGAGAA
CTTCAAGAGATGAGAAAAGACGAGCTCAGCACAATGAAGT
TGAGCGAAGAAGAAGAGACAAAATCAATAACTGGATTGTT
CAGCTCTCAAAAACAATTCCAGACTGCACCATCGACTCCA
CTAAAACTGGACAGGCATAGTAAAGGTGGGATCCTATCAA
AGGCCTGTGATTACATTCAAGAGCTTCGACAAAGTAACAG
CCGGTTAGGAGATGAGCTGAACAGCATTGAGAGGTTGAGG
ATGGATAACCAGCTGTTACGACAAGAGGTTGAAGACTGGA
AATCTAAGAATCAGATATTGAGGAACCAGCTCCGGCAGCA
TGGCATAGTTGCAGCAGCAAGTGCAGATCCTCAGTAAAGA
ATTTGTCATTTGTTTTTATTTATCTTGAACAAGAGGACGC
GTGTAATGCAGTATTCAGTATATTGGTGATGATTCTTCAT
CAGGATCTTGCCTTATGTACATATTTCTTTTTCTTTCTTT
GTGCACCTCTTCATACTTTCATGTAATAAAGCATTCTTTT
TGTATGTGTCATGACAGGTCAGATGAATTTGTTGATTTTG
TACTTTTACATCTATTGTTTGTGGAATAATATGTTAACTT
TTTGAATGCATTTTCAAATATTTTGTACATTGAAAAGCGA
TTTTCAGTTTTGTCTGAATGGTAAGCATGTCAAATAACTG
CCTAATATTTAACAGTTCGCAACATGGTATGATATTATAG
TAGATTTCATTATGCAGATTGATGAAATAAATAGACGACT
TCAATTTCAA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations