Gene
sema3d
- ID
- ZDB-GENE-990715-2
- Name
- sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
- Symbol
- sema3d Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 18 Mapping Details/Browsers
- Description
- Exhibits neuropilin binding activity. Involved in several processes, including animal organ development; fin regeneration; and nervous system development. Predicted to localize to extracellular space and integral component of plasma membrane. Is expressed in several structures, including central nervous system; hindbrain neural keel; neural crest; notochord; and posterior lateral line system. Orthologous to human SEMA3D (semaphorin 3D).
- Genome Resources
- Note
- None
- Comparative Information
- All Expression Data
- 49 figures from 23 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- eu640 (23 images)
Wild Type Expression Summary
- All Phenotype Data
- 10 figures from 5 publications
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Domain | IPR001627 | Sema domain |
Domain | IPR016201 | PSI domain |
Domain | IPR042582 | Semaphorin-3D, Sema domain |
Family | IPR027231 | Semaphorin |
Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
Homologous_superfamily | IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
Homologous_superfamily | IPR036179 | Immunoglobulin-like domain superfamily |
Homologous_superfamily | IPR036352 | Sema domain superfamily |
Domain Details Per Protein
Protein | Length | Immunoglobulin-like domain superfamily | Immunoglobulin-like fold | PSI domain | Sema domain | Sema domain superfamily | Semaphorin | Semaphorin-3D, Sema domain | WD40/YVTN repeat-like-containing domain superfamily |
---|---|---|---|---|---|---|---|---|---|
UniProtKB:Q9W6G6
|
764 | ||||||||
UniProtKB:E9QD84
|
764 |
Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
---|---|---|---|---|---|
mRNA |
sema3d-201
(1)
|
Ensembl | 2,814 nt |
Interactions and Pathways
No data available
Name | Type | Antigen Genes | Isotype | Host Organism | Assay | Source | Citations |
---|---|---|---|---|---|---|---|
Ab1-sema3d | polyclonal | Rabbit |
|
Sigma-Aldrich
|
3 |
Plasmids
No data available