Gene

cntnap2a

ID
ZDB-GENE-120328-3
Name
contactin associated protein 2a
Symbol
cntnap2a Nomenclature History
Previous Names
  • zmp:0000000672
Type
protein_coding_gene
Location
Chr: 24 Mapping Details/Browsers
Description
Predicted to be involved in anatomical structure morphogenesis. Predicted to be located in membrane and paranodal junction. Is expressed in anterior lateral line ganglion; brain; and posterior lateral line ganglion. Human ortholog(s) of this gene implicated in several diseases, including autism spectrum disorder (multiple); communication disorder (multiple); cortical dysplasia-focal epilepsy syndrome; major depressive disorder; and social phobia. Orthologous to human CNTNAP2 (contactin associated protein 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With cntnap2a Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
cortical dysplasia-focal epilepsy syndrome Alliance Pitt-Hopkins like syndrome 1 610042
{Autism susceptibility 15} 612100
Associated With cntnap2a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000421 Coagulation factor 5/8, C-terminal domain
Domain IPR000742 EGF-like domain
Domain IPR001791 Laminin G domain
Domain IPR002181 Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Domain IPR003585 Neurexin/syndecan/glycophorin C
Family IPR050372 Neurexin-related cell adhesion and synaptic protein
Homologous_superfamily IPR008979 Galactose-binding-like domain superfamily
Homologous_superfamily IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
Homologous_superfamily IPR036056 Fibrinogen-like, C-terminal
Domain Details Per Protein
Protein Length Coagulation factor 5/8, C-terminal domain Concanavalin A-like lectin/glucanase domain superfamily EGF-like domain Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain Fibrinogen-like, C-terminal Galactose-binding-like domain superfamily Laminin G domain Neurexin-related cell adhesion and synaptic protein Neurexin/syndecan/glycophorin C
UniProtKB:A0A8M3B6M0 1326
UniProtKB:L7NKH5 1316
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA cntnap2a-201 (1) Ensembl 4,147 nt
mRNA cntnap2a-202 (1) Ensembl 1,491 nt
mRNA cntnap2a-203 (1) Ensembl 8,495 nt
mRNA cntnap2a-204 (1) Ensembl 8,525 nt
mRNA cntnap2a-205 (1) Ensembl 3,951 nt
Interactions and Pathways
No data available
Antibodies
Name Type Antigen Genes Isotype Host Organism Assay Source Citations
Ab1-cntnap2
  • WB
1
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations