Gene

atxn7

ID

ZDB-GENE-110621-1

Name

ataxin 7

Symbol

atxn7 Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 11 Mapping Details/Browsers

Description

Involved in chordate embryonic development and neuron differentiation. Is expressed in brain; eye; and spinal cord.

Genome Resources

Alliance (1)
Ensembl(GRCz11):ENSDARG00000074804 (2)

Note

None

Comparative Information

Expression

All Expression Data

4 figures from 2 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 14 figures from 3 publications
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With atxn7 Human Ortholog

Disease Ontology Term	Multi-Species Data	OMIM Term	OMIM Phenotype ID
spinocerebellar ataxia type 7	Alliance	Spinocerebellar ataxia 7	164500

Associated With atxn7 Via Experimental Models

Human Disease	Fish	Conditions	Citations
cone-rod dystrophy	AB + MO1-atxn7	standard conditions	Carrillo-Rosas et al., 2018
coloboma	AB + MO1-atxn7	standard conditions	Carrillo-Rosas et al., 2018
nerve fibre bundle defect	AB + MO1-atxn7	standard conditions	Carrillo-Rosas et al., 2018
schizophrenia	atxn7^a236/a236	standard conditions	Thyme et al., 2019

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

No data available

Domain Details Per Protein

No data available

Transcripts

Genome Browsers

Ensembl

ZFIN

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	atxn7-201 (1) Ensembl	Ensembl		8,377 nt	Select Tool
mRNA	atxn7-202 (1) Ensembl	Ensembl		541 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations